RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 EPDR1Q9UM22 224 aa16.17■□□□□ 0.18
CHMP2A-204ENST00000597848 RBAKDNA6NC62 111 aa16.16■□□□□ 0.18
CHMP2A-204ENST00000597848 SPRY2O43597 315 aa16.16■□□□□ 0.18
CHMP2A-204ENST00000597848 K7EQM0 130 aa16.15■□□□□ 0.18
CHMP2A-204ENST00000597848 AMBPP02760 352 aa16.15■□□□□ 0.18
CHMP2A-204ENST00000597848 TCRAP04437 139 aa16.15■□□□□ 0.18
CHMP2A-204ENST00000597848 TSPOP30536 169 aa16.15■□□□□ 0.18
CHMP2A-204ENST00000597848 ZNF680Q8NEM1 530 aa16.15■□□□□ 0.18
CHMP2A-204ENST00000597848 RNF183Q96D59 192 aa16.15■□□□□ 0.18
CHMP2A-204ENST00000597848 ARL2-SNX15V9GYD0 113 aa16.15■□□□□ 0.18
CHMP2A-204ENST00000597848 LEPP41159 167 aa16.14■□□□□ 0.17
CHMP2A-204ENST00000597848 OVOL2Q9BRP0 275 aa16.14■□□□□ 0.17
CHMP2A-204ENST00000597848 MANBALQ9NQG1 85 aa16.14■□□□□ 0.17
CHMP2A-204ENST00000597848 TP53TG1Q9Y2A0 90 aa16.14■□□□□ 0.17
CHMP2A-204ENST00000597848 TRAV12-2A0A075B6T6 113 aa16.13■□□□□ 0.17
CHMP2A-204ENST00000597848 SERTM2A0A1B0GWG4 89 aa16.13■□□□□ 0.17
CHMP2A-204ENST00000597848 J3KRW8 73 aa16.13■□□□□ 0.17
CHMP2A-204ENST00000597848 CDKN1BP46527 198 aa16.13■□□□□ 0.17
CHMP2A-204ENST00000597848 ATP5G3P48201 142 aa16.13■□□□□ 0.17
CHMP2A-204ENST00000597848 ZNF138P52744 262 aa16.13■□□□□ 0.17
CHMP2A-204ENST00000597848 ODF3Q96PU9 254 aa16.13■□□□□ 0.17
CHMP2A-204ENST00000597848 ZNF492Q9P255 531 aa16.13■□□□□ 0.17
CHMP2A-204ENST00000597848 IFNA1P01562 189 aa16.12■□□□□ 0.17
CHMP2A-204ENST00000597848 CYB561D1Q8N8Q1 229 aa16.12■□□□□ 0.17
CHMP2A-204ENST00000597848 CSNK1G2-AS1Q8NCQ2 148 aa16.12■□□□□ 0.17
CHMP2A-204ENST00000597848 Q8TAT8 98 aa16.12■□□□□ 0.17
CHMP2A-204ENST00000597848 IGF2BP2-AS1Q96M15 143 aa16.12■□□□□ 0.17
CHMP2A-204ENST00000597848 ATG101Q9BSB4 218 aa16.12■□□□□ 0.17
CHMP2A-204ENST00000597848 C11orf94C9JXX5 98 aa16.11■□□□□ 0.17
CHMP2A-204ENST00000597848 F6UZH7 168 aa16.11■□□□□ 0.17
CHMP2A-204ENST00000597848 PEX7O00628 323 aa16.11■□□□□ 0.17
CHMP2A-204ENST00000597848 INSP01308 110 aa16.11■□□□□ 0.17
CHMP2A-204ENST00000597848 CCDC28AQ8IWP9 274 aa16.11■□□□□ 0.17
CHMP2A-204ENST00000597848 HIST1H2BAQ96A08 127 aa16.11■□□□□ 0.17
CHMP2A-204ENST00000597848 SGK494Q96LW2 274 aa16.11■□□□□ 0.17
CHMP2A-204ENST00000597848 IGHV3OR16-12A0A075B7B8 117 aa16.1■□□□□ 0.17
CHMP2A-204ENST00000597848 TRAV8-1A0A0A6YYK1 113 aa16.1■□□□□ 0.17
CHMP2A-204ENST00000597848 OR11H2Q8NH07 326 aa16.1■□□□□ 0.17
CHMP2A-204ENST00000597848 PCNPQ8WW12 178 aaKnown RBP16.1■□□□□ 0.17
CHMP2A-204ENST00000597848 RARRES2Q99969 163 aa16.1■□□□□ 0.17
CHMP2A-204ENST00000597848 GOLT1BQ9Y3E0 138 aa16.1■□□□□ 0.17
CHMP2A-204ENST00000597848 U3KQK5 164 aa16.1■□□□□ 0.17
CHMP2A-204ENST00000597848 CRXO43186 299 aaPredicted RBP16.09■□□□□ 0.17
CHMP2A-204ENST00000597848 KIR3DS1Q14943 382 aa16.09■□□□□ 0.17
CHMP2A-204ENST00000597848 TCEAL7Q9BRU2 100 aa16.09■□□□□ 0.17
CHMP2A-204ENST00000597848 TMEM208Q9BTX3 173 aa16.09■□□□□ 0.17
CHMP2A-204ENST00000597848 GPX1P07203 203 aa16.08■□□□□ 0.16
CHMP2A-204ENST00000597848 PMS2P11Q13670 270 aa16.08■□□□□ 0.16
CHMP2A-204ENST00000597848 FAM19A4Q96LR4 140 aa16.08■□□□□ 0.16
CHMP2A-204ENST00000597848 LINC00479Q96M42 142 aa16.08■□□□□ 0.16
CHMP2A-204ENST00000597848 PSG8Q9UQ74 426 aa16.08■□□□□ 0.16
CHMP2A-204ENST00000597848 PRKDCP78527 4128 aaKnown RBP16.07■□□□□ 0.16
CHMP2A-204ENST00000597848 TRAV34A0A0B4J273 112 aa16.07■□□□□ 0.16
CHMP2A-204ENST00000597848 BCL2P10415 239 aa16.07■□□□□ 0.16
CHMP2A-204ENST00000597848 CRISP2P16562 243 aa16.07■□□□□ 0.16
CHMP2A-204ENST00000597848 RNASE4P34096 147 aaKnown RBP16.07■□□□□ 0.16
CHMP2A-204ENST00000597848 FLI1Q01543 452 aaPredicted RBP16.07■□□□□ 0.16
CHMP2A-204ENST00000597848 PRNTQ86SH4 94 aa16.07■□□□□ 0.16
CHMP2A-204ENST00000597848 C1orf158Q8N1D5 194 aa16.07■□□□□ 0.16
CHMP2A-204ENST00000597848 TMEM75Q8N9X5 138 aa16.07■□□□□ 0.16
CHMP2A-204ENST00000597848 LYPD6BQ8NI32 183 aa16.07■□□□□ 0.16
CHMP2A-204ENST00000597848 NBEAL2Q6ZNJ1 2754 aa16.06■□□□□ 0.16
CHMP2A-204ENST00000597848 TRBV7-9A0A0J9YWB2 115 aa16.06■□□□□ 0.16
CHMP2A-204ENST00000597848 AKR1C3P42330 323 aa16.06■□□□□ 0.16
CHMP2A-204ENST00000597848 GFI1BQ5VTD9 330 aa16.06■□□□□ 0.16
CHMP2A-204ENST00000597848 TXNDC17Q9BRA2 123 aa16.06■□□□□ 0.16
CHMP2A-204ENST00000597848 NDFIP1Q9BT67 221 aa16.06■□□□□ 0.16
CHMP2A-204ENST00000597848 VAX2Q9UIW0 290 aa16.06■□□□□ 0.16
CHMP2A-204ENST00000597848 LENEPQ9Y5L5 61 aa16.06■□□□□ 0.16
CHMP2A-204ENST00000597848 TRAV12-3A0A0B4J271 114 aa16.05■□□□□ 0.16
CHMP2A-204ENST00000597848 C7orf71A4D174 169 aa16.05■□□□□ 0.16
CHMP2A-204ENST00000597848 FBLL1A6NHQ2 334 aaKnown RBP16.05■□□□□ 0.16
CHMP2A-204ENST00000597848 NMBP08949 121 aa16.05■□□□□ 0.16
CHMP2A-204ENST00000597848 TAGLN2P37802 199 aaKnown RBP16.05■□□□□ 0.16
CHMP2A-204ENST00000597848 MEF2BQ02080 365 aaPredicted RBP16.05■□□□□ 0.16
CHMP2A-204ENST00000597848 ZFAND2AQ8N6M9 145 aa16.05■□□□□ 0.16
CHMP2A-204ENST00000597848 LINC01587Q99440 93 aa16.05■□□□□ 0.16
CHMP2A-204ENST00000597848 TREM1Q9NP99 234 aa16.05■□□□□ 0.16
CHMP2A-204ENST00000597848 SCO2A0A1W2PP80 73 aa16.04■□□□□ 0.16
CHMP2A-204ENST00000597848 KLLNB2CW77 178 aa16.04■□□□□ 0.16
CHMP2A-204ENST00000597848 IGLV2-11P01706 119 aa16.04■□□□□ 0.16
CHMP2A-204ENST00000597848 UBE2G1P62253 170 aa16.04■□□□□ 0.16
CHMP2A-204ENST00000597848 ZNF705AQ6ZN79 300 aaPredicted RBP16.04■□□□□ 0.16
CHMP2A-204ENST00000597848 LOC102723971A0A1B0GUV8 181 aa16.03■□□□□ 0.16
CHMP2A-204ENST00000597848 RBFOX3A6NFN3 312 aa16.03■□□□□ 0.16
CHMP2A-204ENST00000597848 RBMY1A1P0DJD3 496 aaKnown RBP16.03■□□□□ 0.16
CHMP2A-204ENST00000597848 RBMY1CP0DJD4 496 aa16.03■□□□□ 0.16
CHMP2A-204ENST00000597848 BTN1A1Q13410 526 aa16.03■□□□□ 0.16
CHMP2A-204ENST00000597848 RBMY1FQ15415 496 aaKnown RBP16.03■□□□□ 0.16
CHMP2A-204ENST00000597848 TMEM256Q8N2U0 113 aa16.03■□□□□ 0.16
CHMP2A-204ENST00000597848 TVP23CQ96ET8 276 aa16.03■□□□□ 0.16
CHMP2A-204ENST00000597848 C20orf144Q9BQM9 153 aa16.03■□□□□ 0.16
CHMP2A-204ENST00000597848 NIPSNAP3BQ9BS92 247 aa16.03■□□□□ 0.16
CHMP2A-204ENST00000597848 X6R8D5 127 aa16.03■□□□□ 0.16
CHMP2A-204ENST00000597848 RAB14P61106 215 aa16.02■□□□□ 0.16
CHMP2A-204ENST00000597848 SAPCD1Q5SSQ6 148 aa16.02■□□□□ 0.16
CHMP2A-204ENST00000597848 PRR9Q5T870 116 aa16.02■□□□□ 0.16
CHMP2A-204ENST00000597848 FMC1Q96HJ9 113 aa16.02■□□□□ 0.16
CHMP2A-204ENST00000597848 PDE6DO43924 150 aa16.01■□□□□ 0.15
CHMP2A-204ENST00000597848 HTN1P15515 57 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms