RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 PRM2P04554 102 aa10.71□□□□□ -0.69
LIG1-214ENST00000597146 DEFB130BP0DP73 79 aa10.71□□□□□ -0.69
LIG1-214ENST00000597146 DEFB130AP0DP74 79 aa10.71□□□□□ -0.69
LIG1-214ENST00000597146 RPL12P30050 165 aaKnown RBP10.71□□□□□ -0.69
LIG1-214ENST00000597146 AMTNQ6UX39 209 aa10.71□□□□□ -0.69
LIG1-214ENST00000597146 BLNKQ8WV28 456 aa10.71□□□□□ -0.69
LIG1-214ENST00000597146 SMIM3Q9BZL3 60 aa10.71□□□□□ -0.69
LIG1-214ENST00000597146 MED28Q9H204 178 aa10.71□□□□□ -0.69
LIG1-214ENST00000597146 PGPEP1Q9NXJ5 209 aa10.71□□□□□ -0.69
LIG1-214ENST00000597146 ZNF586Q9NXT0 402 aa10.71□□□□□ -0.69
LIG1-214ENST00000597146 MRPS12O15235 138 aaKnown RBP10.7□□□□□ -0.7
LIG1-214ENST00000597146 HIST1H1EP10412 219 aaKnown RBP10.7□□□□□ -0.7
LIG1-214ENST00000597146 LINC00315P59091 139 aa10.7□□□□□ -0.7
LIG1-214ENST00000597146 ICAM4Q14773 271 aa10.7□□□□□ -0.7
LIG1-214ENST00000597146 Q6ZRN7 208 aaPredicted RBP10.7□□□□□ -0.7
LIG1-214ENST00000597146 AAMDCQ9H7C9 122 aa10.7□□□□□ -0.7
LIG1-214ENST00000597146 FAM229AH3BQW9 127 aa10.69□□□□□ -0.7
LIG1-214ENST00000597146 IGLC2P0DOY2 106 aa10.69□□□□□ -0.7
LIG1-214ENST00000597146 CCDC28AQ8IWP9 274 aa10.69□□□□□ -0.7
LIG1-214ENST00000597146 BAP18Q8IXM2 172 aa10.69□□□□□ -0.7
LIG1-214ENST00000597146 TMEM256Q8N2U0 113 aa10.69□□□□□ -0.7
LIG1-214ENST00000597146 ZNF503Q96F45 646 aa10.69□□□□□ -0.7
LIG1-214ENST00000597146 ATP5SQ99766 215 aa10.69□□□□□ -0.7
LIG1-214ENST00000597146 WDR61Q9GZS3 305 aaKnown RBP10.69□□□□□ -0.7
LIG1-214ENST00000597146 PRELID1Q9Y255 219 aa10.69□□□□□ -0.7
LIG1-214ENST00000597146 HSPB11Q9Y547 144 aa10.69□□□□□ -0.7
LIG1-214ENST00000597146 ALG5Q9Y673 324 aa10.69□□□□□ -0.7
LIG1-214ENST00000597146 A8MTW9 85 aa10.68□□□□□ -0.7
LIG1-214ENST00000597146 J3KRW8 73 aa10.68□□□□□ -0.7
LIG1-214ENST00000597146 SLC17A3O00476 420 aa10.68□□□□□ -0.7
LIG1-214ENST00000597146 PTTG1O95997 202 aa10.68□□□□□ -0.7
LIG1-214ENST00000597146 CDKN1BP46527 198 aa10.68□□□□□ -0.7
LIG1-214ENST00000597146 FCN2Q15485 313 aa10.68□□□□□ -0.7
LIG1-214ENST00000597146 GCSAMLQ5JQS6 135 aa10.68□□□□□ -0.7
LIG1-214ENST00000597146 CDPF1Q6NVV7 123 aa10.68□□□□□ -0.7
LIG1-214ENST00000597146 SAT2Q96F10 170 aaPredicted RBP10.68□□□□□ -0.7
LIG1-214ENST00000597146 TMEM14CQ9P0S9 112 aa10.68□□□□□ -0.7
LIG1-214ENST00000597146 MBD2Q9UBB5 411 aa10.68□□□□□ -0.7
LIG1-214ENST00000597146 TRBV19A0A075B6N1 114 aa10.67□□□□□ -0.7
LIG1-214ENST00000597146 A0A1W2PPQ1 181 aa10.67□□□□□ -0.7
LIG1-214ENST00000597146 LYRM9A8MSI8 78 aa10.67□□□□□ -0.7
LIG1-214ENST00000597146 LEPP41159 167 aa10.67□□□□□ -0.7
LIG1-214ENST00000597146 FFAR4Q5NUL3 377 aa10.67□□□□□ -0.7
LIG1-214ENST00000597146 MIR17HGQ75NE6 70 aa10.67□□□□□ -0.7
LIG1-214ENST00000597146 OR51M1Q9H341 326 aa10.67□□□□□ -0.7
LIG1-214ENST00000597146 KRTAP29-1A8MX34 341 aaPredicted RBP10.66□□□□□ -0.7
LIG1-214ENST00000597146 PRAC2D3DTV9 90 aa10.66□□□□□ -0.7
LIG1-214ENST00000597146 OR7C2O60412 319 aa10.66□□□□□ -0.7
LIG1-214ENST00000597146 ZNF253O75346 499 aa10.66□□□□□ -0.7
LIG1-214ENST00000597146 ATP5G1P05496 136 aa10.66□□□□□ -0.7
LIG1-214ENST00000597146 NBEAP1P0C6P0 100 aa10.66□□□□□ -0.7
LIG1-214ENST00000597146 DNAH10OSP0CZ25 163 aa10.66□□□□□ -0.7
LIG1-214ENST00000597146 PYYP10082 97 aa10.66□□□□□ -0.7
LIG1-214ENST00000597146 ATP5G3P48201 142 aa10.66□□□□□ -0.7
LIG1-214ENST00000597146 TAS2R60P59551 318 aa10.66□□□□□ -0.7
LIG1-214ENST00000597146 SERTAD4-AS1Q5TG53 156 aa10.66□□□□□ -0.7
LIG1-214ENST00000597146 SYT8Q8NBV8 401 aa10.66□□□□□ -0.7
LIG1-214ENST00000597146 PAXXQ9BUH6 204 aa10.66□□□□□ -0.7
LIG1-214ENST00000597146 MRPL32Q9BYC8 188 aaKnown RBP10.66□□□□□ -0.7
LIG1-214ENST00000597146 A0A1W2PPV4 95 aa10.65□□□□□ -0.7
LIG1-214ENST00000597146 CRXO43186 299 aaPredicted RBP10.65□□□□□ -0.7
LIG1-214ENST00000597146 CSN1S1P47710 185 aa10.65□□□□□ -0.7
LIG1-214ENST00000597146 ERVFC1-1P60608 527 aa10.65□□□□□ -0.7
LIG1-214ENST00000597146 UPK3BQ9BT76 320 aa10.65□□□□□ -0.7
LIG1-214ENST00000597146 FUT9Q9Y231 359 aa10.65□□□□□ -0.7
LIG1-214ENST00000597146 FAT3Q8TDW7 4589 aa10.65□□□□□ -0.71
LIG1-214ENST00000597146 PLAC8L1A1L4L8 177 aa10.64□□□□□ -0.71
LIG1-214ENST00000597146 H7BYZ3 331 aa10.64□□□□□ -0.71
LIG1-214ENST00000597146 EREGO14944 169 aa10.64□□□□□ -0.71
LIG1-214ENST00000597146 OR10J4P0C629 311 aa10.64□□□□□ -0.71
LIG1-214ENST00000597146 TAS2R45P59539 299 aa10.64□□□□□ -0.71
LIG1-214ENST00000597146 PDE6HQ13956 83 aa10.64□□□□□ -0.71
LIG1-214ENST00000597146 FAM122CQ6P4D5 195 aa10.64□□□□□ -0.71
LIG1-214ENST00000597146 EXOC3-AS1Q8N2X6 119 aa10.64□□□□□ -0.71
LIG1-214ENST00000597146 MRPL53Q96EL3 112 aaKnown RBP10.64□□□□□ -0.71
LIG1-214ENST00000597146 LINC00477Q96M19 166 aa10.64□□□□□ -0.71
LIG1-214ENST00000597146 C20orf144Q9BQM9 153 aa10.64□□□□□ -0.71
LIG1-214ENST00000597146 SLC25A2Q9BXI2 301 aa10.64□□□□□ -0.71
LIG1-214ENST00000597146 DNAH8Q96JB1 4490 aa10.64□□□□□ -0.71
LIG1-214ENST00000597146 TRAV12-3A0A0B4J271 114 aa10.63□□□□□ -0.71
LIG1-214ENST00000597146 AZU1P20160 251 aa10.63□□□□□ -0.71
LIG1-214ENST00000597146 ESRGQ1W209 222 aa10.63□□□□□ -0.71
LIG1-214ENST00000597146 ACOT6Q3I5F7 207 aaPredicted RBP10.63□□□□□ -0.71
LIG1-214ENST00000597146 TMEM78Q5T7P6 136 aa10.63□□□□□ -0.71
LIG1-214ENST00000597146 ZNF493Q6ZR52 646 aa10.63□□□□□ -0.71
LIG1-214ENST00000597146 C16orf74Q96GX8 76 aa10.63□□□□□ -0.71
LIG1-214ENST00000597146 PARD6GQ9BYG4 376 aaPredicted RBP10.63□□□□□ -0.71
LIG1-214ENST00000597146 PLA2G2DQ9UNK4 145 aa10.63□□□□□ -0.71
LIG1-214ENST00000597146 TIMM8BQ9Y5J9 83 aaPredicted RBP10.63□□□□□ -0.71
LIG1-214ENST00000597146 M0R3E3 92 aa10.62□□□□□ -0.71
LIG1-214ENST00000597146 CT45A10P0DMU9 189 aa10.62□□□□□ -0.71
LIG1-214ENST00000597146 RANP62826 216 aaKnown RBP10.62□□□□□ -0.71
LIG1-214ENST00000597146 ERCC8Q13216 396 aa10.62□□□□□ -0.71
LIG1-214ENST00000597146 INO80EQ8NBZ0 244 aaPredicted RBP10.62□□□□□ -0.71
LIG1-214ENST00000597146 MRPS16Q9Y3D3 137 aaKnown RBP10.62□□□□□ -0.71
LIG1-214ENST00000597146 RNF213Q63HN8 5207 aa10.62□□□□□ -0.71
LIG1-214ENST00000597146 CBY3A6NI87 242 aa10.61□□□□□ -0.71
LIG1-214ENST00000597146 NPIPB6E9PJ23 425 aa10.61□□□□□ -0.71
LIG1-214ENST00000597146 NDUFB4O95168 129 aa10.61□□□□□ -0.71
LIG1-214ENST00000597146 GPX1P07203 203 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms