RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 M0R2Z0 102 aa6.09□□□□□ -1.43
VRK3-211ENST00000596445 HBE1P02100 147 aa6.09□□□□□ -1.43
VRK3-211ENST00000596445 CT45A10P0DMU9 189 aa6.09□□□□□ -1.43
VRK3-211ENST00000596445 TSPOP30536 169 aa6.09□□□□□ -1.43
VRK3-211ENST00000596445 PPT1P50897 306 aa6.09□□□□□ -1.43
VRK3-211ENST00000596445 UBE2G2P60604 165 aa6.09□□□□□ -1.43
VRK3-211ENST00000596445 SPINK13Q1W4C9 94 aa6.09□□□□□ -1.43
VRK3-211ENST00000596445 TMEM78Q5T7P6 136 aa6.09□□□□□ -1.43
VRK3-211ENST00000596445 IGF2BP2-AS1Q96M15 143 aa6.09□□□□□ -1.43
VRK3-211ENST00000596445 VGLL1Q99990 258 aa6.09□□□□□ -1.43
VRK3-211ENST00000596445 AGPAT4-IT1Q9H0P7 198 aa6.09□□□□□ -1.43
VRK3-211ENST00000596445 DNAH7Q8WXX0 4024 aa6.08□□□□□ -1.44
VRK3-211ENST00000596445 K7EQM0 130 aa6.08□□□□□ -1.44
VRK3-211ENST00000596445 LEPP41159 167 aa6.08□□□□□ -1.44
VRK3-211ENST00000596445 CDKN1BP46527 198 aa6.08□□□□□ -1.44
VRK3-211ENST00000596445 ZNF138P52744 262 aa6.08□□□□□ -1.44
VRK3-211ENST00000596445 GNG5P63218 68 aa6.08□□□□□ -1.44
VRK3-211ENST00000596445 BLOC1S1P78537 153 aa6.08□□□□□ -1.44
VRK3-211ENST00000596445 CST9LP1Q5W188 147 aa6.08□□□□□ -1.44
VRK3-211ENST00000596445 GOLT1AQ6ZVE7 132 aa6.08□□□□□ -1.44
VRK3-211ENST00000596445 OR11H2Q8NH07 326 aa6.08□□□□□ -1.44
VRK3-211ENST00000596445 FAM19A4Q96LR4 140 aa6.08□□□□□ -1.44
VRK3-211ENST00000596445 RARRES2Q99969 163 aa6.08□□□□□ -1.44
VRK3-211ENST00000596445 ZNF492Q9P255 531 aa6.08□□□□□ -1.44
VRK3-211ENST00000596445 EPDR1Q9UM22 224 aa6.08□□□□□ -1.44
VRK3-211ENST00000596445 RPH3ALQ9UNE2 315 aa6.08□□□□□ -1.44
VRK3-211ENST00000596445 TRBV7-9A0A0J9YWB2 115 aa6.07□□□□□ -1.44
VRK3-211ENST00000596445 CRXO43186 299 aaPredicted RBP6.07□□□□□ -1.44
VRK3-211ENST00000596445 PAGE4O60829 102 aa6.07□□□□□ -1.44
VRK3-211ENST00000596445 INSP01308 110 aa6.07□□□□□ -1.44
VRK3-211ENST00000596445 IFNA7P01567 189 aa6.07□□□□□ -1.44
VRK3-211ENST00000596445 TCRAP04437 139 aa6.07□□□□□ -1.44
VRK3-211ENST00000596445 NMBP08949 121 aa6.07□□□□□ -1.44
VRK3-211ENST00000596445 CCL20P78556 96 aa6.07□□□□□ -1.44
VRK3-211ENST00000596445 PMS2P11Q13670 270 aa6.07□□□□□ -1.44
VRK3-211ENST00000596445 TEX261Q6UWH6 196 aa6.07□□□□□ -1.44
VRK3-211ENST00000596445 ZNF705AQ6ZN79 300 aaPredicted RBP6.07□□□□□ -1.44
VRK3-211ENST00000596445 CCDC28AQ8IWP9 274 aa6.07□□□□□ -1.44
VRK3-211ENST00000596445 CYB561D1Q8N8Q1 229 aa6.07□□□□□ -1.44
VRK3-211ENST00000596445 HIST1H2BAQ96A08 127 aa6.07□□□□□ -1.44
VRK3-211ENST00000596445 TCEAL7Q9BRU2 100 aa6.07□□□□□ -1.44
VRK3-211ENST00000596445 ATG101Q9BSB4 218 aa6.07□□□□□ -1.44
VRK3-211ENST00000596445 MANBALQ9NQG1 85 aa6.07□□□□□ -1.44
VRK3-211ENST00000596445 GOLT1BQ9Y3E0 138 aa6.07□□□□□ -1.44
VRK3-211ENST00000596445 LENEPQ9Y5L5 61 aa6.07□□□□□ -1.44
VRK3-211ENST00000596445 TRAV12-2A0A075B6T6 113 aa6.06□□□□□ -1.44
VRK3-211ENST00000596445 TRAV8-1A0A0A6YYK1 113 aa6.06□□□□□ -1.44
VRK3-211ENST00000596445 FBLL1A6NHQ2 334 aaKnown RBP6.06□□□□□ -1.44
VRK3-211ENST00000596445 KLLNB2CW77 178 aa6.06□□□□□ -1.44
VRK3-211ENST00000596445 F6UZH7 168 aa6.06□□□□□ -1.44
VRK3-211ENST00000596445 CRISP2P16562 243 aa6.06□□□□□ -1.44
VRK3-211ENST00000596445 C1orf158Q8N1D5 194 aa6.06□□□□□ -1.44
VRK3-211ENST00000596445 TMEM256Q8N2U0 113 aa6.06□□□□□ -1.44
VRK3-211ENST00000596445 TMEM75Q8N9X5 138 aa6.06□□□□□ -1.44
VRK3-211ENST00000596445 ZNF680Q8NEM1 530 aa6.06□□□□□ -1.44
VRK3-211ENST00000596445 Q8TAT8 98 aa6.06□□□□□ -1.44
VRK3-211ENST00000596445 NEU1Q99519 415 aa6.06□□□□□ -1.44
VRK3-211ENST00000596445 C20orf144Q9BQM9 153 aa6.06□□□□□ -1.44
VRK3-211ENST00000596445 GNG13Q9P2W3 67 aa6.06□□□□□ -1.44
VRK3-211ENST00000596445 X6R8D5 127 aa6.06□□□□□ -1.44
VRK3-211ENST00000596445 IGHV3OR16-12A0A075B7B8 117 aa6.05□□□□□ -1.44
VRK3-211ENST00000596445 C7orf71A4D174 169 aa6.05□□□□□ -1.44
VRK3-211ENST00000596445 SMIM9A6NGZ8 99 aa6.05□□□□□ -1.44
VRK3-211ENST00000596445 C11orf94C9JXX5 98 aa6.05□□□□□ -1.44
VRK3-211ENST00000596445 PEX7O00628 323 aa6.05□□□□□ -1.44
VRK3-211ENST00000596445 IFNA1P01562 189 aa6.05□□□□□ -1.44
VRK3-211ENST00000596445 IGLV2-11P01706 119 aa6.05□□□□□ -1.44
VRK3-211ENST00000596445 GPX1P07203 203 aa6.05□□□□□ -1.44
VRK3-211ENST00000596445 MIFP14174 115 aa6.05□□□□□ -1.44
VRK3-211ENST00000596445 TAGLN2P37802 199 aaKnown RBP6.05□□□□□ -1.44
VRK3-211ENST00000596445 ATP5G3P48201 142 aa6.05□□□□□ -1.44
VRK3-211ENST00000596445 KIR3DS1Q14943 382 aa6.05□□□□□ -1.44
VRK3-211ENST00000596445 GFI1BQ5VTD9 330 aa6.05□□□□□ -1.44
VRK3-211ENST00000596445 ZFAND2AQ8N6M9 145 aa6.05□□□□□ -1.44
VRK3-211ENST00000596445 Q8NAQ8 132 aa6.05□□□□□ -1.44
VRK3-211ENST00000596445 LYPD6BQ8NI32 183 aa6.05□□□□□ -1.44
VRK3-211ENST00000596445 TXNDC17Q9BRA2 123 aa6.05□□□□□ -1.44
VRK3-211ENST00000596445 TMEM208Q9BTX3 173 aa6.05□□□□□ -1.44
VRK3-211ENST00000596445 TRAV12-3A0A0B4J271 114 aa6.04□□□□□ -1.44
VRK3-211ENST00000596445 TRAV34A0A0B4J273 112 aa6.04□□□□□ -1.44
VRK3-211ENST00000596445 H7BYZ3 331 aa6.04□□□□□ -1.44
VRK3-211ENST00000596445 J3KRW8 73 aa6.04□□□□□ -1.44
VRK3-211ENST00000596445 ZNF324O75467 553 aaPredicted RBP6.04□□□□□ -1.44
VRK3-211ENST00000596445 RBMY1A1P0DJD3 496 aaKnown RBP6.04□□□□□ -1.44
VRK3-211ENST00000596445 RBMY1CP0DJD4 496 aa6.04□□□□□ -1.44
VRK3-211ENST00000596445 BCL2P10415 239 aa6.04□□□□□ -1.44
VRK3-211ENST00000596445 RNASE4P34096 147 aaKnown RBP6.04□□□□□ -1.44
VRK3-211ENST00000596445 FLI1Q01543 452 aaPredicted RBP6.04□□□□□ -1.44
VRK3-211ENST00000596445 BTN1A1Q13410 526 aa6.04□□□□□ -1.44
VRK3-211ENST00000596445 RBMY1FQ15415 496 aaKnown RBP6.04□□□□□ -1.44
VRK3-211ENST00000596445 TVP23CQ96ET8 276 aa6.04□□□□□ -1.44
VRK3-211ENST00000596445 SGK494Q96LW2 274 aa6.04□□□□□ -1.44
VRK3-211ENST00000596445 LINC00479Q96M42 142 aa6.04□□□□□ -1.44
VRK3-211ENST00000596445 LINC01587Q99440 93 aa6.04□□□□□ -1.44
VRK3-211ENST00000596445 NIPSNAP3BQ9BS92 247 aa6.04□□□□□ -1.44
VRK3-211ENST00000596445 NDFIP1Q9BT67 221 aa6.04□□□□□ -1.44
VRK3-211ENST00000596445 C11orf68Q9H3H3 251 aaKnown RBP6.04□□□□□ -1.44
VRK3-211ENST00000596445 EDA2RQ9HAV5 297 aa6.04□□□□□ -1.44
VRK3-211ENST00000596445 TREM1Q9NP99 234 aa6.04□□□□□ -1.44
VRK3-211ENST00000596445 PSG8Q9UQ74 426 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms