RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 STAG3L3P0CL85 134 aa11.4□□□□□ -0.58
USHBP1-206ENST00000596436 ARL14EPLP0DKL9 152 aa11.4□□□□□ -0.58
USHBP1-206ENST00000596436 RANP62826 216 aaKnown RBP11.4□□□□□ -0.58
USHBP1-206ENST00000596436 ERCC8Q13216 396 aa11.4□□□□□ -0.58
USHBP1-206ENST00000596436 KIR3DS1Q14943 382 aa11.4□□□□□ -0.58
USHBP1-206ENST00000596436 ZNF726P1Q15940 193 aa11.4□□□□□ -0.58
USHBP1-206ENST00000596436 PQLC2Q6ZP29 291 aa11.4□□□□□ -0.58
USHBP1-206ENST00000596436 TCTE3Q8IZS6 198 aa11.4□□□□□ -0.58
USHBP1-206ENST00000596436 Q9H3A6 140 aa11.4□□□□□ -0.58
USHBP1-206ENST00000596436 GOLT1BQ9Y3E0 138 aa11.4□□□□□ -0.58
USHBP1-206ENST00000596436 IGKV2-40A0A087WW87 121 aaPredicted RBP11.39□□□□□ -0.59
USHBP1-206ENST00000596436 INSP01308 110 aa11.39□□□□□ -0.59
USHBP1-206ENST00000596436 IGKV2D-40P01614 121 aaPredicted RBP11.39□□□□□ -0.59
USHBP1-206ENST00000596436 MBP02144 154 aa11.39□□□□□ -0.59
USHBP1-206ENST00000596436 CT45A10P0DMU9 189 aa11.39□□□□□ -0.59
USHBP1-206ENST00000596436 NEU1Q99519 415 aa11.39□□□□□ -0.59
USHBP1-206ENST00000596436 PPP1R14DQ9NXH3 145 aa11.39□□□□□ -0.59
USHBP1-206ENST00000596436 A0A0D9SG52 128 aa11.38□□□□□ -0.59
USHBP1-206ENST00000596436 BCL2L11O43521 198 aa11.38□□□□□ -0.59
USHBP1-206ENST00000596436 PLA2G2EQ9NZK7 142 aa11.38□□□□□ -0.59
USHBP1-206ENST00000596436 A0A1B0GVG6 124 aa11.37□□□□□ -0.59
USHBP1-206ENST00000596436 PRM2P04554 102 aa11.37□□□□□ -0.59
USHBP1-206ENST00000596436 MED14OSP0DP75 135 aa11.37□□□□□ -0.59
USHBP1-206ENST00000596436 GCHFRP30047 84 aa11.37□□□□□ -0.59
USHBP1-206ENST00000596436 CDKN1BP46527 198 aa11.37□□□□□ -0.59
USHBP1-206ENST00000596436 CD300CQ08708 224 aa11.37□□□□□ -0.59
USHBP1-206ENST00000596436 LYPD1Q8N2G4 141 aa11.37□□□□□ -0.59
USHBP1-206ENST00000596436 ODF3Q96PU9 254 aa11.37□□□□□ -0.59
USHBP1-206ENST00000596436 VGLL1Q99990 258 aa11.37□□□□□ -0.59
USHBP1-206ENST00000596436 ACTR3CQ9C0K3 210 aaPredicted RBP11.37□□□□□ -0.59
USHBP1-206ENST00000596436 AGPAT4-IT1Q9H0P7 198 aa11.37□□□□□ -0.59
USHBP1-206ENST00000596436 CELA1Q9UNI1 258 aa11.37□□□□□ -0.59
USHBP1-206ENST00000596436 KANTRA0A1W2PQU2 76 aa11.36□□□□□ -0.59
USHBP1-206ENST00000596436 SMIM9A6NGZ8 99 aa11.36□□□□□ -0.59
USHBP1-206ENST00000596436 GFI1BQ5VTD9 330 aa11.36□□□□□ -0.59
USHBP1-206ENST00000596436 TMUB2Q71RG4 321 aa11.36□□□□□ -0.59
USHBP1-206ENST00000596436 SUN5Q8TC36 379 aa11.36□□□□□ -0.59
USHBP1-206ENST00000596436 FAM19A4Q96LR4 140 aa11.36□□□□□ -0.59
USHBP1-206ENST00000596436 TMEM208Q9BTX3 173 aa11.36□□□□□ -0.59
USHBP1-206ENST00000596436 ZNF471Q9BX82 626 aaPredicted RBP11.36□□□□□ -0.59
USHBP1-206ENST00000596436 ZNF705GA8MUZ8 300 aaPredicted RBP11.35□□□□□ -0.59
USHBP1-206ENST00000596436 J3KRW8 73 aa11.35□□□□□ -0.59
USHBP1-206ENST00000596436 RTL8CO15255 209 aa11.35□□□□□ -0.59
USHBP1-206ENST00000596436 C1QBP02746 253 aa11.35□□□□□ -0.59
USHBP1-206ENST00000596436 C12orf74Q32Q52 190 aa11.35□□□□□ -0.59
USHBP1-206ENST00000596436 AKR1C8PQ5T2L2 129 aa11.35□□□□□ -0.59
USHBP1-206ENST00000596436 C9orf47Q6ZRZ4 202 aa11.35□□□□□ -0.59
USHBP1-206ENST00000596436 AKAP14Q86UN6 197 aa11.35□□□□□ -0.59
USHBP1-206ENST00000596436 OTORQ9NRC9 128 aa11.35□□□□□ -0.59
USHBP1-206ENST00000596436 CTXND1A0A1B0GTU2 59 aa11.34□□□□□ -0.59
USHBP1-206ENST00000596436 LOC102723971A0A1B0GUV8 181 aa11.34□□□□□ -0.59
USHBP1-206ENST00000596436 PGPA6NDG6 321 aa11.34□□□□□ -0.59
USHBP1-206ENST00000596436 CXorf1O96002 111 aa11.34□□□□□ -0.59
USHBP1-206ENST00000596436 HBE1P02100 147 aa11.34□□□□□ -0.59
USHBP1-206ENST00000596436 TSPOP30536 169 aa11.34□□□□□ -0.59
USHBP1-206ENST00000596436 LEPP41159 167 aa11.34□□□□□ -0.59
USHBP1-206ENST00000596436 LGALSLQ3ZCW2 172 aaPredicted RBP11.34□□□□□ -0.59
USHBP1-206ENST00000596436 POM121L12Q8N7R1 296 aa11.34□□□□□ -0.59
USHBP1-206ENST00000596436 Q8TAT8 98 aa11.34□□□□□ -0.59
USHBP1-206ENST00000596436 HYLS1Q96M11 299 aa11.34□□□□□ -0.59
USHBP1-206ENST00000596436 LINC00477Q96M19 166 aa11.34□□□□□ -0.59
USHBP1-206ENST00000596436 DEFB131BA0A096LNP1 70 aa11.33□□□□□ -0.6
USHBP1-206ENST00000596436 DIRC3C9JPN6 131 aa11.33□□□□□ -0.6
USHBP1-206ENST00000596436 PFDN1O60925 122 aa11.33□□□□□ -0.6
USHBP1-206ENST00000596436 P0DMU3 169 aa11.33□□□□□ -0.6
USHBP1-206ENST00000596436 FAM231AP0DMU4 169 aa11.33□□□□□ -0.6
USHBP1-206ENST00000596436 FAM231CP0DMU5 169 aa11.33□□□□□ -0.6
USHBP1-206ENST00000596436 FHITP49789 147 aa11.33□□□□□ -0.6
USHBP1-206ENST00000596436 EMP1P54849 157 aa11.33□□□□□ -0.6
USHBP1-206ENST00000596436 FGF8P55075 233 aaPredicted RBP11.33□□□□□ -0.6
USHBP1-206ENST00000596436 RRN3P1Q2M238 152 aa11.33□□□□□ -0.6
USHBP1-206ENST00000596436 ZNF767PQ75MW2 155 aa11.33□□□□□ -0.6
USHBP1-206ENST00000596436 RPH3ALQ9UNE2 315 aa11.33□□□□□ -0.6
USHBP1-206ENST00000596436 RBAKDNA6NC62 111 aa11.32□□□□□ -0.6
USHBP1-206ENST00000596436 KLLNB2CW77 178 aa11.32□□□□□ -0.6
USHBP1-206ENST00000596436 GGTLC3B5MD39 225 aa11.32□□□□□ -0.6
USHBP1-206ENST00000596436 SEC11BP0C7V7 166 aa11.32□□□□□ -0.6
USHBP1-206ENST00000596436 CRISP2P16562 243 aa11.32□□□□□ -0.6
USHBP1-206ENST00000596436 AZU1P20160 251 aa11.32□□□□□ -0.6
USHBP1-206ENST00000596436 CSN1S1P47710 185 aa11.32□□□□□ -0.6
USHBP1-206ENST00000596436 GNG5P63218 68 aa11.32□□□□□ -0.6
USHBP1-206ENST00000596436 BTN1A1Q13410 526 aa11.32□□□□□ -0.6
USHBP1-206ENST00000596436 TMEM78Q5T7P6 136 aa11.32□□□□□ -0.6
USHBP1-206ENST00000596436 PRR9Q5T870 116 aa11.32□□□□□ -0.6
USHBP1-206ENST00000596436 TMEM256Q8N2U0 113 aa11.32□□□□□ -0.6
USHBP1-206ENST00000596436 ZFAND2AQ8N6M9 145 aa11.32□□□□□ -0.6
USHBP1-206ENST00000596436 LINC01587Q99440 93 aa11.32□□□□□ -0.6
USHBP1-206ENST00000596436 TMPRSS5Q9H3S3 457 aa11.32□□□□□ -0.6
USHBP1-206ENST00000596436 TMEM167BQ9NRX6 74 aa11.32□□□□□ -0.6
USHBP1-206ENST00000596436 ZNF492Q9P255 531 aa11.32□□□□□ -0.6
USHBP1-206ENST00000596436 TRAV12-3A0A0B4J271 114 aa11.31□□□□□ -0.6
USHBP1-206ENST00000596436 PLAC8L1A1L4L8 177 aa11.31□□□□□ -0.6
USHBP1-206ENST00000596436 TMEM189A5PLL7 270 aa11.31□□□□□ -0.6
USHBP1-206ENST00000596436 PRSS29PA6NIE9 313 aa11.31□□□□□ -0.6
USHBP1-206ENST00000596436 SLC25A5P05141 298 aaKnown RBP11.31□□□□□ -0.6
USHBP1-206ENST00000596436 ZNF138P52744 262 aa11.31□□□□□ -0.6
USHBP1-206ENST00000596436 LGALS9BQ3B8N2 356 aa11.31□□□□□ -0.6
USHBP1-206ENST00000596436 IQCF2Q8IXL9 164 aa11.31□□□□□ -0.6
USHBP1-206ENST00000596436 STOML3Q8TAV4 291 aa11.31□□□□□ -0.6
USHBP1-206ENST00000596436 RXFP4Q8TDU9 374 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms