RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 HLA-DRB4P13762 266 aa14.2□□□□□ -0.14
PNKP-207ENST00000596014 PNRC1Q12796 327 aaPredicted RBP14.2□□□□□ -0.14
PNKP-207ENST00000596014 PDE6HQ13956 83 aa14.2□□□□□ -0.14
PNKP-207ENST00000596014 CSTL1Q9H114 145 aa14.2□□□□□ -0.14
PNKP-207ENST00000596014 HLA-DRB4X5D2U9 266 aa14.2□□□□□ -0.14
PNKP-207ENST00000596014 GCHFRP30047 84 aa14.19□□□□□ -0.14
PNKP-207ENST00000596014 EBLN2Q6P2I7 272 aa14.19□□□□□ -0.14
PNKP-207ENST00000596014 ZNF738Q8NE65 137 aa14.19□□□□□ -0.14
PNKP-207ENST00000596014 CLEC5AQ9NY25 188 aa14.19□□□□□ -0.14
PNKP-207ENST00000596014 A0A087WWC5 75 aa14.18□□□□□ -0.14
PNKP-207ENST00000596014 A0A0J9YX75 114 aa14.18□□□□□ -0.14
PNKP-207ENST00000596014 ZNF727A8MUV8 499 aa14.18□□□□□ -0.14
PNKP-207ENST00000596014 C11orf94C9JXX5 98 aa14.18□□□□□ -0.14
PNKP-207ENST00000596014 UBE2CO00762 179 aa14.18□□□□□ -0.14
PNKP-207ENST00000596014 UBE2G2P60604 165 aa14.18□□□□□ -0.14
PNKP-207ENST00000596014 UBE2L3P68036 154 aaKnown RBP14.18□□□□□ -0.14
PNKP-207ENST00000596014 PQLC2Q6ZP29 291 aa14.18□□□□□ -0.14
PNKP-207ENST00000596014 ZMAT4Q9H898 229 aa14.18□□□□□ -0.14
PNKP-207ENST00000596014 COLCA2A8K830 154 aa14.17□□□□□ -0.14
PNKP-207ENST00000596014 PSG9Q00887 426 aa14.17□□□□□ -0.14
PNKP-207ENST00000596014 RPUSD4Q96CM3 377 aaKnown RBP14.17□□□□□ -0.14
PNKP-207ENST00000596014 SMIM7Q9BQ49 75 aa14.17□□□□□ -0.14
PNKP-207ENST00000596014 SPATA25Q9BR10 227 aa14.17□□□□□ -0.14
PNKP-207ENST00000596014 PARLQ9H300 379 aa14.17□□□□□ -0.14
PNKP-207ENST00000596014 STAB2Q8WWQ8 2551 aa14.17□□□□□ -0.14
PNKP-207ENST00000596014 ZNF705FA8MVS1 300 aaPredicted RBP14.17□□□□□ -0.14
PNKP-207ENST00000596014 ATP5G3P48201 142 aa14.17□□□□□ -0.14
PNKP-207ENST00000596014 ZNF674Q2M3X9 581 aa14.17□□□□□ -0.14
PNKP-207ENST00000596014 Q6ZWC4 215 aa14.17□□□□□ -0.14
PNKP-207ENST00000596014 SDF2L1Q9HCN8 221 aa14.17□□□□□ -0.14
PNKP-207ENST00000596014 NAT8Q9UHE5 227 aa14.17□□□□□ -0.14
PNKP-207ENST00000596014 B4DEV8 164 aa14.16□□□□□ -0.14
PNKP-207ENST00000596014 F6UZH7 168 aa14.16□□□□□ -0.14
PNKP-207ENST00000596014 IGKV3-20P01619 116 aa14.16□□□□□ -0.14
PNKP-207ENST00000596014 MORN3Q6PF18 240 aaPredicted RBP14.16□□□□□ -0.14
PNKP-207ENST00000596014 OR4B1Q8NGF8 309 aa14.16□□□□□ -0.14
PNKP-207ENST00000596014 HIST1H2BAQ96A08 127 aa14.16□□□□□ -0.14
PNKP-207ENST00000596014 ISOC2Q96AB3 205 aa14.16□□□□□ -0.14
PNKP-207ENST00000596014 CLUHP3Q96NS8 147 aa14.16□□□□□ -0.14
PNKP-207ENST00000596014 TXNDC17Q9BRA2 123 aa14.16□□□□□ -0.14
PNKP-207ENST00000596014 PDE6DO43924 150 aa14.15□□□□□ -0.14
PNKP-207ENST00000596014 ZNF705DP0CH99 300 aaPredicted RBP14.15□□□□□ -0.14
PNKP-207ENST00000596014 ZNF705BP0CI00 300 aaPredicted RBP14.15□□□□□ -0.14
PNKP-207ENST00000596014 PRB4P10163 310 aaPredicted RBP14.15□□□□□ -0.14
PNKP-207ENST00000596014 EXOC3-AS1Q8N2X6 119 aa14.15□□□□□ -0.14
PNKP-207ENST00000596014 OR8A1Q8NGG7 326 aa14.15□□□□□ -0.14
PNKP-207ENST00000596014 RETNQ9HD89 108 aa14.15□□□□□ -0.14
PNKP-207ENST00000596014 CA1P00915 261 aaPredicted RBP14.14□□□□□ -0.15
PNKP-207ENST00000596014 GIG44P09565 113 aaPredicted RBP14.14□□□□□ -0.15
PNKP-207ENST00000596014 CNN1P51911 297 aaKnown RBP14.14□□□□□ -0.15
PNKP-207ENST00000596014 RANP62826 216 aaKnown RBP14.14□□□□□ -0.15
PNKP-207ENST00000596014 DEFB135Q30KP9 77 aa14.14□□□□□ -0.15
PNKP-207ENST00000596014 CST9LP1Q5W188 147 aa14.14□□□□□ -0.15
PNKP-207ENST00000596014 AAMDCQ9H7C9 122 aa14.14□□□□□ -0.15
PNKP-207ENST00000596014 ARL2-SNX15V9GYD0 113 aa14.14□□□□□ -0.15
PNKP-207ENST00000596014 PRAC2D3DTV9 90 aa14.14□□□□□ -0.15
PNKP-207ENST00000596014 M0R3E3 92 aa14.14□□□□□ -0.15
PNKP-207ENST00000596014 DUSP14O95147 198 aaKnown RBP14.14□□□□□ -0.15
PNKP-207ENST00000596014 NUTF2P61970 127 aaKnown RBP14.14□□□□□ -0.15
PNKP-207ENST00000596014 YPEL4Q96NS1 127 aa14.14□□□□□ -0.15
PNKP-207ENST00000596014 PRELID1Q9Y255 219 aa14.14□□□□□ -0.15
PNKP-207ENST00000596014 YTHDF2Q9Y5A9 579 aaKnown RBP14.14□□□□□ -0.15
PNKP-207ENST00000596014 U3KQK5 164 aa14.14□□□□□ -0.15
PNKP-207ENST00000596014 A8MTW9 85 aa14.13□□□□□ -0.15
PNKP-207ENST00000596014 LYPD1Q8N2G4 141 aa14.13□□□□□ -0.15
PNKP-207ENST00000596014 MRPL53Q96EL3 112 aaKnown RBP14.13□□□□□ -0.15
PNKP-207ENST00000596014 RCHY1Q96PM5 261 aa14.13□□□□□ -0.15
PNKP-207ENST00000596014 TMEM167BQ9NRX6 74 aa14.13□□□□□ -0.15
PNKP-207ENST00000596014 MT-ND4LP03901 98 aa14.12□□□□□ -0.15
PNKP-207ENST00000596014 HIST1H1AQ02539 215 aaPredicted RBP14.12□□□□□ -0.15
PNKP-207ENST00000596014 RNF183Q96D59 192 aa14.12□□□□□ -0.15
PNKP-207ENST00000596014 OVOL2Q9BRP0 275 aa14.12□□□□□ -0.15
PNKP-207ENST00000596014 FLI1Q01543 452 aaPredicted RBP14.11□□□□□ -0.15
PNKP-207ENST00000596014 ADIRFQ15847 76 aa14.11□□□□□ -0.15
PNKP-207ENST00000596014 TMEM241Q24JQ0 296 aa14.11□□□□□ -0.15
PNKP-207ENST00000596014 Q9H3A6 140 aa14.11□□□□□ -0.15
PNKP-207ENST00000596014 TP53TG1Q9Y2A0 90 aa14.11□□□□□ -0.15
PNKP-207ENST00000596014 SPRY2O43597 315 aa14.1□□□□□ -0.15
PNKP-207ENST00000596014 RPL23P62829 140 aaKnown RBP14.1□□□□□ -0.15
PNKP-207ENST00000596014 AMTNQ6UX39 209 aa14.1□□□□□ -0.15
PNKP-207ENST00000596014 XCL2Q9UBD3 114 aa14.1□□□□□ -0.15
PNKP-207ENST00000596014 SCO2A0A1W2PP80 73 aa14.1□□□□□ -0.15
PNKP-207ENST00000596014 CXorf65A6NEN9 183 aa14.1□□□□□ -0.15
PNKP-207ENST00000596014 FXYD7P58549 80 aa14.1□□□□□ -0.15
PNKP-207ENST00000596014 OR10J6PQ8NGY7 276 aa14.1□□□□□ -0.15
PNKP-207ENST00000596014 RNF212Q495C1 297 aa14.09□□□□□ -0.15
PNKP-207ENST00000596014 CSNK1G2-AS1Q8NCQ2 148 aa14.09□□□□□ -0.15
PNKP-207ENST00000596014 C11orf52Q96A22 123 aa14.09□□□□□ -0.15
PNKP-207ENST00000596014 C1QTNF4Q9BXJ3 329 aa14.09□□□□□ -0.15
PNKP-207ENST00000596014 OTORQ9NRC9 128 aa14.09□□□□□ -0.15
PNKP-207ENST00000596014 RAB5AP20339 215 aa14.08□□□□□ -0.16
PNKP-207ENST00000596014 CTDSP1Q9GZU7 261 aa14.08□□□□□ -0.16
PNKP-207ENST00000596014 PGPA6NDG6 321 aa14.07□□□□□ -0.16
PNKP-207ENST00000596014 TMEM242Q9NWH2 141 aa14.07□□□□□ -0.16
PNKP-207ENST00000596014 DERL1Q9BUN8 251 aa14.07□□□□□ -0.16
PNKP-207ENST00000596014 PPP1R14DQ9NXH3 145 aa14.07□□□□□ -0.16
PNKP-207ENST00000596014 NPIPB6E9PJ23 425 aa14.06□□□□□ -0.16
PNKP-207ENST00000596014 CSN1S1P47710 185 aa14.06□□□□□ -0.16
PNKP-207ENST00000596014 ELOBQ15370 118 aa14.06□□□□□ -0.16
PNKP-207ENST00000596014 M0R2Z0 102 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms