RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 Q9H3A6 140 aa7.81□□□□□ -1.16
SHKBP1-206ENST00000595523 DNAH10Q8IVF4 4471 aa7.81□□□□□ -1.16
SHKBP1-206ENST00000595523 IGHV4-4A0A075B6R2 117 aa7.8□□□□□ -1.16
SHKBP1-206ENST00000595523 TEX48A0A1B0GUV7 120 aa7.8□□□□□ -1.16
SHKBP1-206ENST00000595523 KLLNB2CW77 178 aa7.8□□□□□ -1.16
SHKBP1-206ENST00000595523 HMGB3O15347 200 aaKnown RBP7.8□□□□□ -1.16
SHKBP1-206ENST00000595523 LEPP41159 167 aa7.8□□□□□ -1.16
SHKBP1-206ENST00000595523 TAS2R45P59539 299 aa7.8□□□□□ -1.16
SHKBP1-206ENST00000595523 RANP62826 216 aaKnown RBP7.8□□□□□ -1.16
SHKBP1-206ENST00000595523 LYPD1Q8N2G4 141 aa7.8□□□□□ -1.16
SHKBP1-206ENST00000595523 RNASE8Q8TDE3 154 aaKnown RBP7.8□□□□□ -1.16
SHKBP1-206ENST00000595523 C20orf144Q9BQM9 153 aa7.8□□□□□ -1.16
SHKBP1-206ENST00000595523 NACAE9PAV3 2078 aa7.8□□□□□ -1.16
SHKBP1-206ENST00000595523 TRAV12-3A0A0B4J271 114 aa7.79□□□□□ -1.16
SHKBP1-206ENST00000595523 H7BYZ3 331 aa7.79□□□□□ -1.16
SHKBP1-206ENST00000595523 ARPC5O15511 151 aa7.79□□□□□ -1.16
SHKBP1-206ENST00000595523 HTN1P15515 57 aa7.79□□□□□ -1.16
SHKBP1-206ENST00000595523 CRISP2P16562 243 aa7.79□□□□□ -1.16
SHKBP1-206ENST00000595523 CDC34P49427 236 aaPredicted RBP7.79□□□□□ -1.16
SHKBP1-206ENST00000595523 TCTAP57738 103 aa7.79□□□□□ -1.16
SHKBP1-206ENST00000595523 CD300CQ08708 224 aa7.79□□□□□ -1.16
SHKBP1-206ENST00000595523 PRR9Q5T870 116 aa7.79□□□□□ -1.16
SHKBP1-206ENST00000595523 LGALS9CQ6DKI2 356 aa7.79□□□□□ -1.16
SHKBP1-206ENST00000595523 PQLC2Q6ZP29 291 aa7.79□□□□□ -1.16
SHKBP1-206ENST00000595523 SSX7Q7RTT5 188 aa7.79□□□□□ -1.16
SHKBP1-206ENST00000595523 ZFAND2AQ8N6M9 145 aa7.79□□□□□ -1.16
SHKBP1-206ENST00000595523 Q8TAT8 98 aa7.79□□□□□ -1.16
SHKBP1-206ENST00000595523 LINC00477Q96M19 166 aa7.79□□□□□ -1.16
SHKBP1-206ENST00000595523 CYTL1Q9NRR1 136 aa7.79□□□□□ -1.16
SHKBP1-206ENST00000595523 ZNF492Q9P255 531 aa7.79□□□□□ -1.16
SHKBP1-206ENST00000595523 MUC4Q99102 2169 aa7.78□□□□□ -1.16
SHKBP1-206ENST00000595523 A0A1W2PPV4 95 aa7.78□□□□□ -1.16
SHKBP1-206ENST00000595523 C7orf71A4D174 169 aa7.78□□□□□ -1.16
SHKBP1-206ENST00000595523 LYRM9A8MSI8 78 aa7.78□□□□□ -1.16
SHKBP1-206ENST00000595523 ZNF324O75467 553 aaPredicted RBP7.78□□□□□ -1.16
SHKBP1-206ENST00000595523 SLC25A5P05141 298 aaKnown RBP7.78□□□□□ -1.16
SHKBP1-206ENST00000595523 STAG3L2P0CL84 134 aa7.78□□□□□ -1.16
SHKBP1-206ENST00000595523 STAG3L3P0CL85 134 aa7.78□□□□□ -1.16
SHKBP1-206ENST00000595523 ARL14EPLP0DKL9 152 aa7.78□□□□□ -1.16
SHKBP1-206ENST00000595523 SERF2P84101 59 aa7.78□□□□□ -1.16
SHKBP1-206ENST00000595523 BTN1A1Q13410 526 aa7.78□□□□□ -1.16
SHKBP1-206ENST00000595523 Q6ZQT7 251 aa7.78□□□□□ -1.16
SHKBP1-206ENST00000595523 OR11H4Q8NGC9 324 aa7.78□□□□□ -1.16
SHKBP1-206ENST00000595523 TMEM263Q8WUH6 116 aaKnown RBP7.78□□□□□ -1.16
SHKBP1-206ENST00000595523 RAB24Q969Q5 203 aa7.78□□□□□ -1.16
SHKBP1-206ENST00000595523 C16orf74Q96GX8 76 aa7.78□□□□□ -1.16
SHKBP1-206ENST00000595523 RBAKDNA6NC62 111 aa7.77□□□□□ -1.17
SHKBP1-206ENST00000595523 DIRC3C9JPN6 131 aa7.77□□□□□ -1.17
SHKBP1-206ENST00000595523 DAD1P61803 113 aa7.77□□□□□ -1.17
SHKBP1-206ENST00000595523 ZNF726P1Q15940 193 aa7.77□□□□□ -1.17
SHKBP1-206ENST00000595523 TMEM78Q5T7P6 136 aa7.77□□□□□ -1.17
SHKBP1-206ENST00000595523 ZNF493Q6ZR52 646 aa7.77□□□□□ -1.17
SHKBP1-206ENST00000595523 SUN5Q8TC36 379 aa7.77□□□□□ -1.17
SHKBP1-206ENST00000595523 OTORQ9NRC9 128 aa7.77□□□□□ -1.17
SHKBP1-206ENST00000595523 BORCS7-ASMTA0A0B4J1R7 106 aa7.76□□□□□ -1.17
SHKBP1-206ENST00000595523 PGPA6NDG6 321 aa7.76□□□□□ -1.17
SHKBP1-206ENST00000595523 MBP02144 154 aa7.76□□□□□ -1.17
SHKBP1-206ENST00000595523 NMBP08949 121 aa7.76□□□□□ -1.17
SHKBP1-206ENST00000595523 DEFB130BP0DP73 79 aa7.76□□□□□ -1.17
SHKBP1-206ENST00000595523 DEFB130AP0DP74 79 aa7.76□□□□□ -1.17
SHKBP1-206ENST00000595523 RNASE4P34096 147 aaKnown RBP7.76□□□□□ -1.17
SHKBP1-206ENST00000595523 CSN1S1P47710 185 aa7.76□□□□□ -1.17
SHKBP1-206ENST00000595523 ZNF138P52744 262 aa7.76□□□□□ -1.17
SHKBP1-206ENST00000595523 LINC00612Q8N6U2 182 aa7.76□□□□□ -1.17
SHKBP1-206ENST00000595523 GNPNAT1Q96EK6 184 aaPredicted RBP7.76□□□□□ -1.17
SHKBP1-206ENST00000595523 HYLS1Q96M11 299 aa7.76□□□□□ -1.17
SHKBP1-206ENST00000595523 PYGO2Q9BRQ0 406 aa7.76□□□□□ -1.17
SHKBP1-206ENST00000595523 NOP10Q9NPE3 64 aaKnown RBP7.76□□□□□ -1.17
SHKBP1-206ENST00000595523 TIMM8BQ9Y5J9 83 aaPredicted RBP7.76□□□□□ -1.17
SHKBP1-206ENST00000595523 DNAH2Q9P225 4427 aa7.76□□□□□ -1.17
SHKBP1-206ENST00000595523 BIRC6Q9NR09 4857 aa7.75□□□□□ -1.17
SHKBP1-206ENST00000595523 TRBV7-9A0A0J9YWB2 115 aa7.75□□□□□ -1.17
SHKBP1-206ENST00000595523 GPX1P07203 203 aa7.75□□□□□ -1.17
SHKBP1-206ENST00000595523 HTN3P15516 51 aa7.75□□□□□ -1.17
SHKBP1-206ENST00000595523 GCHFRP30047 84 aa7.75□□□□□ -1.17
SHKBP1-206ENST00000595523 GNG5P63218 68 aa7.75□□□□□ -1.17
SHKBP1-206ENST00000595523 ZNF345Q14585 488 aa7.75□□□□□ -1.17
SHKBP1-206ENST00000595523 KCNRGQ8N5I3 272 aa7.75□□□□□ -1.17
SHKBP1-206ENST00000595523 C11orf72Q8NBR9 251 aa7.75□□□□□ -1.17
SHKBP1-206ENST00000595523 RXFP4Q8TDU9 374 aa7.75□□□□□ -1.17
SHKBP1-206ENST00000595523 LINC00467Q9BRT7 94 aa7.75□□□□□ -1.17
SHKBP1-206ENST00000595523 NDUFAF3Q9BU61 184 aa7.75□□□□□ -1.17
SHKBP1-206ENST00000595523 GGTLC3B5MD39 225 aa7.74□□□□□ -1.17
SHKBP1-206ENST00000595523 TAAR5O14804 337 aa7.74□□□□□ -1.17
SHKBP1-206ENST00000595523 TMEM88Q6PEY1 159 aa7.74□□□□□ -1.17
SHKBP1-206ENST00000595523 GOLT1AQ6ZVE7 132 aa7.74□□□□□ -1.17
SHKBP1-206ENST00000595523 ARL6IP6Q8N6S5 226 aa7.74□□□□□ -1.17
SHKBP1-206ENST00000595523 TVP23CQ96ET8 276 aa7.74□□□□□ -1.17
SHKBP1-206ENST00000595523 ACTR3CQ9C0K3 210 aaPredicted RBP7.74□□□□□ -1.17
SHKBP1-206ENST00000595523 TP53TG3Q9ULZ0 132 aa7.74□□□□□ -1.17
SHKBP1-206ENST00000595523 RPH3ALQ9UNE2 315 aa7.74□□□□□ -1.17
SHKBP1-206ENST00000595523 TRAV8-1A0A0A6YYK1 113 aa7.73□□□□□ -1.17
SHKBP1-206ENST00000595523 HMSDA8MTL9 139 aa7.73□□□□□ -1.17
SHKBP1-206ENST00000595523 CXorf1O96002 111 aa7.73□□□□□ -1.17
SHKBP1-206ENST00000595523 ANXA2RQ3ZCQ2 193 aa7.73□□□□□ -1.17
SHKBP1-206ENST00000595523 FAM74A1Q5RGS3 127 aa7.73□□□□□ -1.17
SHKBP1-206ENST00000595523 CCDC28AQ8IWP9 274 aa7.73□□□□□ -1.17
SHKBP1-206ENST00000595523 EIF4E3Q8N5X7 224 aaKnown RBP7.73□□□□□ -1.17
SHKBP1-206ENST00000595523 CMTM2Q8TAZ6 248 aa7.73□□□□□ -1.17
SHKBP1-206ENST00000595523 TMED6Q8WW62 240 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms