RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 RBMY1A1P0DJD3 496 aaKnown RBP16.56■□□□□ 0.24
PNKP-205ENST00000595081 RBMY1CP0DJD4 496 aa16.56■□□□□ 0.24
PNKP-205ENST00000595081 GNG5P63218 68 aa16.56■□□□□ 0.24
PNKP-205ENST00000595081 RBMY1FQ15415 496 aaKnown RBP16.56■□□□□ 0.24
PNKP-205ENST00000595081 RXFP4Q8TDU9 374 aa16.56■□□□□ 0.24
PNKP-205ENST00000595081 LINC00477Q96M19 166 aa16.56■□□□□ 0.24
PNKP-205ENST00000595081 ODF3Q96PU9 254 aa16.56■□□□□ 0.24
PNKP-205ENST00000595081 GGTLC3B5MD39 225 aa16.55■□□□□ 0.24
PNKP-205ENST00000595081 SLC25A5P05141 298 aaKnown RBP16.55■□□□□ 0.24
PNKP-205ENST00000595081 TSPOP30536 169 aa16.55■□□□□ 0.24
PNKP-205ENST00000595081 UBE2G2P60604 165 aa16.55■□□□□ 0.24
PNKP-205ENST00000595081 EIF5AL1Q6IS14 154 aaKnown RBP16.55■□□□□ 0.24
PNKP-205ENST00000595081 DPPA3Q6W0C5 159 aa16.55■□□□□ 0.24
PNKP-205ENST00000595081 SFT2D1Q8WV19 159 aa16.55■□□□□ 0.24
PNKP-205ENST00000595081 YTHDF2Q9Y5A9 579 aaKnown RBP16.55■□□□□ 0.24
PNKP-205ENST00000595081 A0A1B0GV50 99 aa16.54■□□□□ 0.24
PNKP-205ENST00000595081 MIFP14174 115 aa16.54■□□□□ 0.24
PNKP-205ENST00000595081 LEPP41159 167 aa16.54■□□□□ 0.24
PNKP-205ENST00000595081 TMEM78Q5T7P6 136 aa16.54■□□□□ 0.24
PNKP-205ENST00000595081 Q8TAT8 98 aa16.54■□□□□ 0.24
PNKP-205ENST00000595081 TMEM208Q9BTX3 173 aa16.54■□□□□ 0.24
PNKP-205ENST00000595081 BOLA1Q9Y3E2 137 aa16.54■□□□□ 0.24
PNKP-205ENST00000595081 RBAKDNA6NC62 111 aa16.53■□□□□ 0.24
PNKP-205ENST00000595081 SUMO1P63165 101 aaKnown RBP16.53■□□□□ 0.24
PNKP-205ENST00000595081 GFI1BQ5VTD9 330 aa16.53■□□□□ 0.24
PNKP-205ENST00000595081 GOLT1AQ6ZVE7 132 aa16.53■□□□□ 0.24
PNKP-205ENST00000595081 MBD3L1Q8WWY6 194 aa16.53■□□□□ 0.24
PNKP-205ENST00000595081 FAM19A4Q96LR4 140 aa16.53■□□□□ 0.24
PNKP-205ENST00000595081 C11orf68Q9H3H3 251 aaKnown RBP16.53■□□□□ 0.24
PNKP-205ENST00000595081 A0A1W2PRE2 83 aa16.52■□□□□ 0.24
PNKP-205ENST00000595081 ZNF138P52744 262 aa16.52■□□□□ 0.24
PNKP-205ENST00000595081 C5orf17Q8NAS9 161 aa16.52■□□□□ 0.24
PNKP-205ENST00000595081 ZNF492Q9P255 531 aa16.52■□□□□ 0.24
PNKP-205ENST00000595081 PRM2P04554 102 aa16.51■□□□□ 0.23
PNKP-205ENST00000595081 H2AFB1P0C5Y9 115 aa16.51■□□□□ 0.23
PNKP-205ENST00000595081 ARL6IP6Q8N6S5 226 aa16.51■□□□□ 0.23
PNKP-205ENST00000595081 MUC7Q8TAX7 377 aa16.51■□□□□ 0.23
PNKP-205ENST00000595081 NEU1Q99519 415 aa16.51■□□□□ 0.23
PNKP-205ENST00000595081 FAM74A7A6NL05 159 aa16.5■□□□□ 0.23
PNKP-205ENST00000595081 SULT1A2P50226 295 aa16.5■□□□□ 0.23
PNKP-205ENST00000595081 RAB5CP51148 216 aa16.5■□□□□ 0.23
PNKP-205ENST00000595081 TRAV8-1A0A0A6YYK1 113 aa16.49■□□□□ 0.23
PNKP-205ENST00000595081 ZNF705GA8MUZ8 300 aaPredicted RBP16.49■□□□□ 0.23
PNKP-205ENST00000595081 HBE1P02100 147 aa16.49■□□□□ 0.23
PNKP-205ENST00000595081 ZFAND2AQ8N6M9 145 aa16.49■□□□□ 0.23
PNKP-205ENST00000595081 IL17DQ8TAD2 202 aa16.49■□□□□ 0.23
PNKP-205ENST00000595081 LINC01587Q99440 93 aa16.49■□□□□ 0.23
PNKP-205ENST00000595081 TRAV12-3A0A0B4J271 114 aa16.48■□□□□ 0.23
PNKP-205ENST00000595081 SMIM9A6NGZ8 99 aa16.48■□□□□ 0.23
PNKP-205ENST00000595081 KLLNB2CW77 178 aa16.48■□□□□ 0.23
PNKP-205ENST00000595081 TCRAP04437 139 aa16.48■□□□□ 0.23
PNKP-205ENST00000595081 CRISP2P16562 243 aa16.48■□□□□ 0.23
PNKP-205ENST00000595081 BTN1A1Q13410 526 aa16.48■□□□□ 0.23
PNKP-205ENST00000595081 PRR9Q5T870 116 aa16.48■□□□□ 0.23
PNKP-205ENST00000595081 SGK494Q96LW2 274 aa16.48■□□□□ 0.23
PNKP-205ENST00000595081 EPDR1Q9UM22 224 aa16.48■□□□□ 0.23
PNKP-205ENST00000595081 C7orf71A4D174 169 aa16.47■□□□□ 0.23
PNKP-205ENST00000595081 RNASE4P34096 147 aaKnown RBP16.47■□□□□ 0.23
PNKP-205ENST00000595081 RRN3P1Q2M238 152 aa16.47■□□□□ 0.23
PNKP-205ENST00000595081 ZFAND6Q6FIF0 208 aa16.47■□□□□ 0.23
PNKP-205ENST00000595081 TMEM256Q8N2U0 113 aa16.47■□□□□ 0.23
PNKP-205ENST00000595081 LOC102723971A0A1B0GUV8 181 aa16.46■□□□□ 0.23
PNKP-205ENST00000595081 IFNA7P01567 189 aa16.46■□□□□ 0.23
PNKP-205ENST00000595081 GPX1P07203 203 aa16.46■□□□□ 0.23
PNKP-205ENST00000595081 EMP1P54849 157 aa16.46■□□□□ 0.23
PNKP-205ENST00000595081 ALKAL2Q6UX46 152 aa16.46■□□□□ 0.23
PNKP-205ENST00000595081 C20orf144Q9BQM9 153 aa16.46■□□□□ 0.23
PNKP-205ENST00000595081 PAGE4O60829 102 aa16.45■□□□□ 0.22
PNKP-205ENST00000595081 NMBP08949 121 aa16.45■□□□□ 0.22
PNKP-205ENST00000595081 HTN1P15515 57 aa16.45■□□□□ 0.22
PNKP-205ENST00000595081 CCL20P78556 96 aa16.45■□□□□ 0.22
PNKP-205ENST00000595081 CST9LP1Q5W188 147 aa16.45■□□□□ 0.22
PNKP-205ENST00000595081 ATG101Q9BSB4 218 aa16.45■□□□□ 0.22
PNKP-205ENST00000595081 TRBV7-9A0A0J9YWB2 115 aa16.44■□□□□ 0.22
PNKP-205ENST00000595081 SERTM2A0A1B0GWG4 89 aa16.44■□□□□ 0.22
PNKP-205ENST00000595081 H7BYZ3 331 aa16.44■□□□□ 0.22
PNKP-205ENST00000595081 AZU1P20160 251 aa16.44■□□□□ 0.22
PNKP-205ENST00000595081 ATP5G3P48201 142 aa16.44■□□□□ 0.22
PNKP-205ENST00000595081 TAS2R60P59551 318 aa16.44■□□□□ 0.22
PNKP-205ENST00000595081 NANOS2P60321 138 aaKnown RBP16.44■□□□□ 0.22
PNKP-205ENST00000595081 CYB561D1Q8N8Q1 229 aa16.44■□□□□ 0.22
PNKP-205ENST00000595081 C11orf45Q8TAV5 145 aa16.44■□□□□ 0.22
PNKP-205ENST00000595081 NIPSNAP3BQ9BS92 247 aa16.44■□□□□ 0.22
PNKP-205ENST00000595081 NKX6-2Q9C056 277 aaPredicted RBP16.44■□□□□ 0.22
PNKP-205ENST00000595081 CELA1Q9UNI1 258 aa16.44■□□□□ 0.22
PNKP-205ENST00000595081 TRAV1-1A0A0B4J248 108 aa16.43■□□□□ 0.22
PNKP-205ENST00000595081 C3orf84H3BNL1 204 aa16.43■□□□□ 0.22
PNKP-205ENST00000595081 K7EQM0 130 aa16.43■□□□□ 0.22
PNKP-205ENST00000595081 PMS2P11Q13670 270 aa16.43■□□□□ 0.22
PNKP-205ENST00000595081 Q6ZQT7 251 aa16.43■□□□□ 0.22
PNKP-205ENST00000595081 CCDC28AQ8IWP9 274 aa16.43■□□□□ 0.22
PNKP-205ENST00000595081 TVP23CQ96ET8 276 aa16.43■□□□□ 0.22
PNKP-205ENST00000595081 LINC00479Q96M42 142 aa16.43■□□□□ 0.22
PNKP-205ENST00000595081 LENEPQ9Y5L5 61 aa16.43■□□□□ 0.22
PNKP-205ENST00000595081 ARL2-SNX15V9GYD0 113 aa16.43■□□□□ 0.22
PNKP-205ENST00000595081 PEX7O00628 323 aa16.42■□□□□ 0.22
PNKP-205ENST00000595081 ZNF324O75467 553 aaPredicted RBP16.42■□□□□ 0.22
PNKP-205ENST00000595081 IGLV2-11P01706 119 aa16.42■□□□□ 0.22
PNKP-205ENST00000595081 TRAV34A0A0B4J273 112 aa16.41■□□□□ 0.22
PNKP-205ENST00000595081 TMEM189A5PLL7 270 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms