RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 LYZP61626 148 aa13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 ZNF562Q6V9R5 426 aa13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 Q8N6K4 173 aa13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 BLNKQ8WV28 456 aa13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 FXYD5Q96DB9 178 aa13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 KLF12Q9Y4X4 402 aa13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 SAMD5Q5TGI4 173 aa13.37□□□□□ -0.27
SHKBP1-205ENST00000594973 THYN1Q9P016 225 aa13.37□□□□□ -0.27
SHKBP1-205ENST00000594973 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.36□□□□□ -0.27
SHKBP1-205ENST00000594973 FAM106CPP0CH98 169 aa13.36□□□□□ -0.27
SHKBP1-205ENST00000594973 GTSF1Q8WW33 167 aa13.36□□□□□ -0.27
SHKBP1-205ENST00000594973 AJUBAQ96IF1 538 aa13.36□□□□□ -0.27
SHKBP1-205ENST00000594973 GPR82Q96P67 336 aa13.36□□□□□ -0.27
SHKBP1-205ENST00000594973 NAA38Q9BRA0 125 aaKnown RBP13.36□□□□□ -0.27
SHKBP1-205ENST00000594973 MLST8Q9BVC4 326 aa13.36□□□□□ -0.27
SHKBP1-205ENST00000594973 AP5S1Q9NUS5 200 aa13.36□□□□□ -0.27
SHKBP1-205ENST00000594973 IGHV3OR16-10A0A075B7F0 116 aa13.36□□□□□ -0.27
SHKBP1-205ENST00000594973 RAB9AP51151 201 aa13.36□□□□□ -0.27
SHKBP1-205ENST00000594973 PIP4P2Q8N4L2 257 aa13.36□□□□□ -0.27
SHKBP1-205ENST00000594973 PIMREGQ9BSJ6 248 aa13.36□□□□□ -0.27
SHKBP1-205ENST00000594973 IGHV4-61A0A0C4DH41 118 aa13.35□□□□□ -0.27
SHKBP1-205ENST00000594973 H3BTX0 84 aa13.35□□□□□ -0.27
SHKBP1-205ENST00000594973 HAX1O00165 279 aa13.35□□□□□ -0.27
SHKBP1-205ENST00000594973 ZNF207O43670 478 aaKnown RBP13.35□□□□□ -0.27
SHKBP1-205ENST00000594973 IGKV1-17P01599 117 aa13.35□□□□□ -0.27
SHKBP1-205ENST00000594973 EBI3Q14213 229 aa13.35□□□□□ -0.27
SHKBP1-205ENST00000594973 LGALS9BQ3B8N2 356 aa13.35□□□□□ -0.27
SHKBP1-205ENST00000594973 LGALS9CQ6DKI2 356 aa13.35□□□□□ -0.27
SHKBP1-205ENST00000594973 RAB37Q96AX2 223 aa13.35□□□□□ -0.27
SHKBP1-205ENST00000594973 PGLYRP4Q96LB8 373 aa13.35□□□□□ -0.27
SHKBP1-205ENST00000594973 BBC3Q96PG8 261 aaPredicted RBP13.35□□□□□ -0.27
SHKBP1-205ENST00000594973 ABCA2Q9BZC7 2435 aa13.35□□□□□ -0.27
SHKBP1-205ENST00000594973 C19orf71A6NCJ1 209 aa13.35□□□□□ -0.27
SHKBP1-205ENST00000594973 SMIM13P0DJ93 91 aa13.35□□□□□ -0.27
SHKBP1-205ENST00000594973 MYCNOSP40205 109 aa13.35□□□□□ -0.27
SHKBP1-205ENST00000594973 ATP5J2P56134 94 aa13.35□□□□□ -0.27
SHKBP1-205ENST00000594973 CKS1BP61024 79 aa13.35□□□□□ -0.27
SHKBP1-205ENST00000594973 P01737 135 aa13.34□□□□□ -0.27
SHKBP1-205ENST00000594973 ZNF48Q96MX3 618 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-205ENST00000594973 SIGLEC8Q9NYZ4 499 aa13.34□□□□□ -0.27
SHKBP1-205ENST00000594973 HIGD1AQ9Y241 93 aa13.34□□□□□ -0.27
SHKBP1-205ENST00000594973 TSSC4Q9Y5U2 329 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-205ENST00000594973 SELENOKQ9Y6D0 94 aa13.34□□□□□ -0.27
SHKBP1-205ENST00000594973 ZNF138P52744 262 aa13.34□□□□□ -0.27
SHKBP1-205ENST00000594973 MTURNQ8N3F0 131 aa13.34□□□□□ -0.27
SHKBP1-205ENST00000594973 STXBP6Q8NFX7 210 aa13.34□□□□□ -0.27
SHKBP1-205ENST00000594973 NRGNQ92686 78 aa13.34□□□□□ -0.27
SHKBP1-205ENST00000594973 EPDR1Q9UM22 224 aa13.34□□□□□ -0.27
SHKBP1-205ENST00000594973 CENPVL3A0A0U1RRI6 287 aa13.33□□□□□ -0.28
SHKBP1-205ENST00000594973 NPFFO15130 113 aa13.33□□□□□ -0.28
SHKBP1-205ENST00000594973 NCR2O95944 276 aa13.33□□□□□ -0.28
SHKBP1-205ENST00000594973 Q8N9W7 124 aa13.33□□□□□ -0.28
SHKBP1-205ENST00000594973 FANCD2OSQ96PS1 177 aa13.33□□□□□ -0.28
SHKBP1-205ENST00000594973 VGLL1Q99990 258 aa13.33□□□□□ -0.28
SHKBP1-205ENST00000594973 IGHV7-81A0A0B4J1V7 117 aa13.33□□□□□ -0.28
SHKBP1-205ENST00000594973 GNG5P63218 68 aa13.33□□□□□ -0.28
SHKBP1-205ENST00000594973 POLQO75417 2590 aa13.32□□□□□ -0.28
SHKBP1-205ENST00000594973 NPIPB5A8MRT5 1133 aa13.32□□□□□ -0.28
SHKBP1-205ENST00000594973 F8W1H4 67 aa13.32□□□□□ -0.28
SHKBP1-205ENST00000594973 IGHV3-23P01764 117 aa13.32□□□□□ -0.28
SHKBP1-205ENST00000594973 APOHP02749 345 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-205ENST00000594973 C10orf105Q8TEF2 133 aa13.32□□□□□ -0.28
SHKBP1-205ENST00000594973 SLC25A39Q9BZJ4 359 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-205ENST00000594973 IGLV11-55A0A075B6I3 123 aa13.31□□□□□ -0.28
SHKBP1-205ENST00000594973 GP9P14770 177 aa13.31□□□□□ -0.28
SHKBP1-205ENST00000594973 GATD1Q8NB37 220 aa13.31□□□□□ -0.28
SHKBP1-205ENST00000594973 UBR5O95071 2799 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-205ENST00000594973 IGHV4-30-2A0A087WSY4 118 aa13.31□□□□□ -0.28
SHKBP1-205ENST00000594973 NPIPB6E9PJ23 425 aa13.31□□□□□ -0.28
SHKBP1-205ENST00000594973 PSMG4Q5JS54 123 aa13.31□□□□□ -0.28
SHKBP1-205ENST00000594973 PRR31Q5SQ13 230 aa13.31□□□□□ -0.28
SHKBP1-205ENST00000594973 TTC9CQ8N5M4 171 aa13.31□□□□□ -0.28
SHKBP1-205ENST00000594973 DAZAP1Q96EP5 407 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-205ENST00000594973 MRAP2Q96G30 205 aa13.31□□□□□ -0.28
SHKBP1-205ENST00000594973 FMC1Q96HJ9 113 aa13.31□□□□□ -0.28
SHKBP1-205ENST00000594973 SGK494Q96LW2 274 aa13.31□□□□□ -0.28
SHKBP1-205ENST00000594973 SPANXB1Q9NS25 103 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-205ENST00000594973 PGPA6NDG6 321 aa13.3□□□□□ -0.28
SHKBP1-205ENST00000594973 EGR2P11161 476 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-205ENST00000594973 BRD3OSQ6XYD6 125 aa13.3□□□□□ -0.28
SHKBP1-205ENST00000594973 LINC00322Q6ZN03 302 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-205ENST00000594973 LTAP01374 205 aa13.3□□□□□ -0.28
SHKBP1-205ENST00000594973 IL4P05112 153 aa13.3□□□□□ -0.28
SHKBP1-205ENST00000594973 SLC25A5P05141 298 aaKnown RBP13.3□□□□□ -0.28
SHKBP1-205ENST00000594973 FBN2P35556 2912 aa13.29□□□□□ -0.28
SHKBP1-205ENST00000594973 TRAV26-1A0A087WT03 109 aa13.29□□□□□ -0.28
SHKBP1-205ENST00000594973 CSN3P07498 182 aa13.29□□□□□ -0.28
SHKBP1-205ENST00000594973 CT45A10P0DMU9 189 aa13.29□□□□□ -0.28
SHKBP1-205ENST00000594973 PAX8Q06710 450 aa13.29□□□□□ -0.28
SHKBP1-205ENST00000594973 ECSCRQ19T08 205 aa13.29□□□□□ -0.28
SHKBP1-205ENST00000594973 CRYBA4P53673 196 aa13.29□□□□□ -0.28
SHKBP1-205ENST00000594973 PRSS3P2Q8NHM4 247 aa13.29□□□□□ -0.28
SHKBP1-205ENST00000594973 HIGD1BQ9P298 99 aa13.29□□□□□ -0.28
SHKBP1-205ENST00000594973 TIMM8BQ9Y5J9 83 aaPredicted RBP13.29□□□□□ -0.28
SHKBP1-205ENST00000594973 TRAV40A0A0B4J280 105 aa13.28□□□□□ -0.28
SHKBP1-205ENST00000594973 A0A1B0GW15 77 aa13.28□□□□□ -0.28
SHKBP1-205ENST00000594973 MFAP4P55083 255 aa13.28□□□□□ -0.28
SHKBP1-205ENST00000594973 TMEM219Q86XT9 240 aa13.28□□□□□ -0.28
SHKBP1-205ENST00000594973 ZNF491Q8N8L2 437 aa13.28□□□□□ -0.28
SHKBP1-205ENST00000594973 PIFOQ8TCI5 191 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms