RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 WNK1Q9H4A3 2382 aa11.45□□□□□ -0.58
VRK3-207ENST00000594092 IGKV2-40A0A087WW87 121 aaPredicted RBP11.44□□□□□ -0.58
VRK3-207ENST00000594092 A0A1W2PPQ1 181 aa11.44□□□□□ -0.58
VRK3-207ENST00000594092 IGKV2D-40P01614 121 aaPredicted RBP11.44□□□□□ -0.58
VRK3-207ENST00000594092 GBGT1Q8N5D6 347 aa11.44□□□□□ -0.58
VRK3-207ENST00000594092 BTF3L4Q96K17 158 aa11.44□□□□□ -0.58
VRK3-207ENST00000594092 C20orf173Q96LM9 149 aa11.44□□□□□ -0.58
VRK3-207ENST00000594092 ZNF705GA8MUZ8 300 aaPredicted RBP11.44□□□□□ -0.58
VRK3-207ENST00000594092 OVOL1O14753 267 aa11.44□□□□□ -0.58
VRK3-207ENST00000594092 RPS10P46783 165 aaKnown RBP11.44□□□□□ -0.58
VRK3-207ENST00000594092 SMUG1Q53HV7 270 aa11.44□□□□□ -0.58
VRK3-207ENST00000594092 DCANP1Q8TF63 244 aa11.44□□□□□ -0.58
VRK3-207ENST00000594092 PYGO2Q9BRQ0 406 aa11.44□□□□□ -0.58
VRK3-207ENST00000594092 MS4A6AQ9H2W1 248 aa11.44□□□□□ -0.58
VRK3-207ENST00000594092 PRAC2D3DTV9 90 aa11.43□□□□□ -0.58
VRK3-207ENST00000594092 GATCO43716 136 aaKnown RBP11.43□□□□□ -0.58
VRK3-207ENST00000594092 FAM3BP58499 235 aaPredicted RBP11.43□□□□□ -0.58
VRK3-207ENST00000594092 KRTAP24-1Q3LI83 254 aa11.43□□□□□ -0.58
VRK3-207ENST00000594092 ZNF492Q9P255 531 aa11.43□□□□□ -0.58
VRK3-207ENST00000594092 ATRQ13535 2644 aa11.43□□□□□ -0.58
VRK3-207ENST00000594092 TENM1Q9UKZ4 2725 aa11.42□□□□□ -0.58
VRK3-207ENST00000594092 RBAKDNA6NC62 111 aa11.42□□□□□ -0.58
VRK3-207ENST00000594092 C1orf196B1AJZ1 125 aa11.42□□□□□ -0.58
VRK3-207ENST00000594092 PRIMA1Q86XR5 153 aa11.42□□□□□ -0.58
VRK3-207ENST00000594092 WFDC3Q8IUB2 231 aa11.42□□□□□ -0.58
VRK3-207ENST00000594092 NUDT10Q8NFP7 164 aa11.42□□□□□ -0.58
VRK3-207ENST00000594092 DAZAP1Q96EP5 407 aaKnown RBP11.42□□□□□ -0.58
VRK3-207ENST00000594092 NUDT11Q96G61 164 aa11.42□□□□□ -0.58
VRK3-207ENST00000594092 CITED1Q99966 193 aa11.42□□□□□ -0.58
VRK3-207ENST00000594092 SAPCD1Q5SSQ6 148 aa11.42□□□□□ -0.58
VRK3-207ENST00000594092 SAMD13Q5VXD3 122 aa11.42□□□□□ -0.58
VRK3-207ENST00000594092 TRAV9-1A0A075B6T8 112 aa11.41□□□□□ -0.58
VRK3-207ENST00000594092 TFPI2P48307 235 aa11.41□□□□□ -0.58
VRK3-207ENST00000594092 RAB5BP61020 215 aa11.41□□□□□ -0.58
VRK3-207ENST00000594092 DYNLRB2Q8TF09 96 aa11.41□□□□□ -0.58
VRK3-207ENST00000594092 VGLL1Q99990 258 aa11.41□□□□□ -0.58
VRK3-207ENST00000594092 C19orf71A6NCJ1 209 aa11.4□□□□□ -0.58
VRK3-207ENST00000594092 K7EQG2 157 aa11.4□□□□□ -0.58
VRK3-207ENST00000594092 P01737 135 aa11.4□□□□□ -0.58
VRK3-207ENST00000594092 ID1P41134 155 aa11.4□□□□□ -0.58
VRK3-207ENST00000594092 DEFB114Q30KQ6 69 aa11.4□□□□□ -0.58
VRK3-207ENST00000594092 ZNF738Q8NE65 137 aa11.4□□□□□ -0.58
VRK3-207ENST00000594092 NDFIP1Q9BT67 221 aa11.4□□□□□ -0.58
VRK3-207ENST00000594092 SIGLEC8Q9NYZ4 499 aa11.4□□□□□ -0.58
VRK3-207ENST00000594092 CT45A10P0DMU9 189 aa11.39□□□□□ -0.59
VRK3-207ENST00000594092 LINC00322Q6ZN03 302 aaPredicted RBP11.39□□□□□ -0.59
VRK3-207ENST00000594092 TMEM61Q8N0U2 210 aa11.39□□□□□ -0.59
VRK3-207ENST00000594092 ZC2HC1AQ96GY0 325 aa11.39□□□□□ -0.59
VRK3-207ENST00000594092 ASCL2Q99929 193 aa11.39□□□□□ -0.59
VRK3-207ENST00000594092 RPP21Q9H633 154 aaKnown RBP11.39□□□□□ -0.59
VRK3-207ENST00000594092 SRD5A3Q9H8P0 318 aa11.39□□□□□ -0.59
VRK3-207ENST00000594092 PF4P02776 101 aa11.39□□□□□ -0.59
VRK3-207ENST00000594092 TYMSP04818 313 aa11.39□□□□□ -0.59
VRK3-207ENST00000594092 PAFAH1B2P68402 229 aa11.39□□□□□ -0.59
VRK3-207ENST00000594092 ERCC8Q13216 396 aa11.39□□□□□ -0.59
VRK3-207ENST00000594092 RBPMS2Q6ZRY4 209 aaKnown RBP11.39□□□□□ -0.59
VRK3-207ENST00000594092 PRR25Q96S07 402 aa11.39□□□□□ -0.59
VRK3-207ENST00000594092 SMIM27A0A1W2PRY6 76 aa11.38□□□□□ -0.59
VRK3-207ENST00000594092 CA1P00915 261 aaPredicted RBP11.38□□□□□ -0.59
VRK3-207ENST00000594092 RPL19P84098 196 aaKnown RBP11.38□□□□□ -0.59
VRK3-207ENST00000594092 CD300EQ496F6 205 aaPredicted RBP11.38□□□□□ -0.59
VRK3-207ENST00000594092 ZFP82Q8N141 532 aa11.38□□□□□ -0.59
VRK3-207ENST00000594092 Q8TAT8 98 aa11.38□□□□□ -0.59
VRK3-207ENST00000594092 C8orf49Q96NF6 230 aa11.38□□□□□ -0.59
VRK3-207ENST00000594092 DEFB1P60022 68 aa11.37□□□□□ -0.59
VRK3-207ENST00000594092 CT83Q5H943 113 aa11.37□□□□□ -0.59
VRK3-207ENST00000594092 TMEM78Q5T7P6 136 aa11.37□□□□□ -0.59
VRK3-207ENST00000594092 COX8CQ7Z4L0 72 aa11.37□□□□□ -0.59
VRK3-207ENST00000594092 LINC00482Q8N8I6 264 aa11.37□□□□□ -0.59
VRK3-207ENST00000594092 OR4B1Q8NGF8 309 aa11.37□□□□□ -0.59
VRK3-207ENST00000594092 TSKUQ8WUA8 353 aa11.37□□□□□ -0.59
VRK3-207ENST00000594092 AGPAT4-IT1Q9H0P7 198 aa11.37□□□□□ -0.59
VRK3-207ENST00000594092 ZNF688P0C7X2 276 aa11.37□□□□□ -0.59
VRK3-207ENST00000594092 TCL1AP56279 114 aa11.37□□□□□ -0.59
VRK3-207ENST00000594092 SNRPD3P62318 126 aaKnown RBP11.37□□□□□ -0.59
VRK3-207ENST00000594092 C9orf47Q6ZRZ4 202 aa11.37□□□□□ -0.59
VRK3-207ENST00000594092 FBN1P35555 2871 aaKnown RBP11.36□□□□□ -0.59
VRK3-207ENST00000594092 TRAV2A0A0B4J234 112 aa11.36□□□□□ -0.59
VRK3-207ENST00000594092 A8MWL6 223 aa11.36□□□□□ -0.59
VRK3-207ENST00000594092 NPIPB6E9PJ23 425 aa11.36□□□□□ -0.59
VRK3-207ENST00000594092 TRGC2P03986 189 aa11.36□□□□□ -0.59
VRK3-207ENST00000594092 ZNF705DP0CH99 300 aaPredicted RBP11.36□□□□□ -0.59
VRK3-207ENST00000594092 ZNF705BP0CI00 300 aaPredicted RBP11.36□□□□□ -0.59
VRK3-207ENST00000594092 GPR61Q9BZJ8 451 aa11.36□□□□□ -0.59
VRK3-207ENST00000594092 NAT8BQ9UHF3 227 aa11.36□□□□□ -0.59
VRK3-207ENST00000594092 F6UB75 175 aa11.35□□□□□ -0.59
VRK3-207ENST00000594092 SAP30O75446 220 aa11.35□□□□□ -0.59
VRK3-207ENST00000594092 ZNF138P52744 262 aa11.35□□□□□ -0.59
VRK3-207ENST00000594092 PSMG4Q5JS54 123 aa11.35□□□□□ -0.59
VRK3-207ENST00000594092 FAM162BQ5T6X4 162 aa11.35□□□□□ -0.59
VRK3-207ENST00000594092 OR10J6PQ8NGY7 276 aa11.35□□□□□ -0.59
VRK3-207ENST00000594092 TRAV25A0A0B4J276 109 aa11.35□□□□□ -0.59
VRK3-207ENST00000594092 IZUMO1RA6ND01 250 aa11.35□□□□□ -0.59
VRK3-207ENST00000594092 CRIP1P50238 77 aa11.35□□□□□ -0.59
VRK3-207ENST00000594092 OR8A1Q8NGG7 326 aa11.35□□□□□ -0.59
VRK3-207ENST00000594092 OR2D3Q8NGH3 330 aa11.35□□□□□ -0.59
VRK3-207ENST00000594092 NEU1Q99519 415 aa11.34□□□□□ -0.59
VRK3-207ENST00000594092 SPAG8Q99932 426 aaPredicted RBP11.34□□□□□ -0.59
VRK3-207ENST00000594092 GFRA4Q9GZZ7 299 aa11.34□□□□□ -0.59
VRK3-207ENST00000594092 PPP1R14DQ9NXH3 145 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms