RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 GPR82Q96P67 336 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 NAT8BQ9UHF3 227 aa10.1□□□□□ -0.79
VRK3-205ENST00000593919 IZUMO1RA6ND01 250 aa10.09□□□□□ -0.79
VRK3-205ENST00000593919 HAX1O00165 279 aa10.09□□□□□ -0.79
VRK3-205ENST00000593919 PRB4P10163 310 aaPredicted RBP10.09□□□□□ -0.79
VRK3-205ENST00000593919 CRISP2P16562 243 aa10.09□□□□□ -0.79
VRK3-205ENST00000593919 DEFB136Q30KP8 78 aa10.09□□□□□ -0.79
VRK3-205ENST00000593919 TMEM136Q6ZRR5 245 aa10.09□□□□□ -0.79
VRK3-205ENST00000593919 GPHB5Q86YW7 130 aa10.09□□□□□ -0.79
VRK3-205ENST00000593919 C11orf44Q8N8P7 122 aa10.09□□□□□ -0.79
VRK3-205ENST00000593919 C4orf3Q8WVX3 66 aa10.09□□□□□ -0.79
VRK3-205ENST00000593919 C14orf144Q96I85 54 aa10.09□□□□□ -0.79
VRK3-205ENST00000593919 RNF24Q9Y225 148 aa10.09□□□□□ -0.79
VRK3-205ENST00000593919 RNF114Q9Y508 228 aa10.09□□□□□ -0.79
VRK3-205ENST00000593919 U3KQE9 123 aa10.09□□□□□ -0.79
VRK3-205ENST00000593919 TRBV19A0A075B6N1 114 aa10.08□□□□□ -0.8
VRK3-205ENST00000593919 TRAV8-1A0A0A6YYK1 113 aa10.08□□□□□ -0.8
VRK3-205ENST00000593919 A0A1B0GV90 55 aa10.08□□□□□ -0.8
VRK3-205ENST00000593919 NUPR1O60356 82 aa10.08□□□□□ -0.8
VRK3-205ENST00000593919 RPL7P18124 248 aaKnown RBP10.08□□□□□ -0.8
VRK3-205ENST00000593919 FAM106AQ4KMX7 169 aa10.08□□□□□ -0.8
VRK3-205ENST00000593919 GOLT1AQ6ZVE7 132 aa10.08□□□□□ -0.8
VRK3-205ENST00000593919 LTAP01374 205 aa10.08□□□□□ -0.8
VRK3-205ENST00000593919 CD28P10747 220 aa10.08□□□□□ -0.8
VRK3-205ENST00000593919 KIAA1644Q3SXP7 199 aa10.08□□□□□ -0.8
VRK3-205ENST00000593919 KLHL30-AS1Q8NEE0 82 aa10.08□□□□□ -0.8
VRK3-205ENST00000593919 SMIM12Q96EX1 92 aa10.08□□□□□ -0.8
VRK3-205ENST00000593919 DAZ1Q9NQZ3 744 aaKnown RBP10.08□□□□□ -0.8
VRK3-205ENST00000593919 MT-ND6P03923 174 aa10.07□□□□□ -0.8
VRK3-205ENST00000593919 HOXD3P31249 432 aaPredicted RBP10.07□□□□□ -0.8
VRK3-205ENST00000593919 PROK1P58294 105 aa10.07□□□□□ -0.8
VRK3-205ENST00000593919 JOSD1Q15040 202 aaPredicted RBP10.07□□□□□ -0.8
VRK3-205ENST00000593919 C1orf194Q5T5A4 169 aa10.07□□□□□ -0.8
VRK3-205ENST00000593919 LINC00322Q6ZN03 302 aaPredicted RBP10.07□□□□□ -0.8
VRK3-205ENST00000593919 Q86TA4 180 aa10.07□□□□□ -0.8
VRK3-205ENST00000593919 MLST8Q9BVC4 326 aa10.07□□□□□ -0.8
VRK3-205ENST00000593919 ZNF331Q9NQX6 463 aaPredicted RBP10.07□□□□□ -0.8
VRK3-205ENST00000593919 TP53TG3Q9ULZ0 132 aa10.07□□□□□ -0.8
VRK3-205ENST00000593919 SMAD5-AS1Q9Y6J3 95 aa10.07□□□□□ -0.8
VRK3-205ENST00000593919 TENM1Q9UKZ4 2725 aa10.06□□□□□ -0.8
VRK3-205ENST00000593919 F2Z2F3 143 aa10.06□□□□□ -0.8
VRK3-205ENST00000593919 GZMBP10144 247 aa10.06□□□□□ -0.8
VRK3-205ENST00000593919 COX19Q49B96 90 aa10.06□□□□□ -0.8
VRK3-205ENST00000593919 PRNTQ86SH4 94 aa10.06□□□□□ -0.8
VRK3-205ENST00000593919 NUP35Q8NFH5 326 aa10.06□□□□□ -0.8
VRK3-205ENST00000593919 ATRQ13535 2644 aa10.06□□□□□ -0.8
VRK3-205ENST00000593919 SERF1AO75920 110 aa10.06□□□□□ -0.8
VRK3-205ENST00000593919 ZNF124Q15973 351 aa10.06□□□□□ -0.8
VRK3-205ENST00000593919 SIGLEC15Q6ZMC9 328 aa10.06□□□□□ -0.8
VRK3-205ENST00000593919 BAGE3Q86Y29 109 aa10.06□□□□□ -0.8
VRK3-205ENST00000593919 OR11H1Q8NG94 326 aa10.06□□□□□ -0.8
VRK3-205ENST00000593919 TSKUQ8WUA8 353 aa10.06□□□□□ -0.8
VRK3-205ENST00000593919 NEU1Q99519 415 aa10.06□□□□□ -0.8
VRK3-205ENST00000593919 CITED2Q99967 270 aaPredicted RBP10.06□□□□□ -0.8
VRK3-205ENST00000593919 HIGD1CA8MV81 97 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 P01737 135 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 HLA-DQA1P01909 254 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 EDN2P20800 178 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 SYNJ2BPP57105 145 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 PDE6HQ13956 83 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 DNLZQ5SXM8 178 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 C8orf86Q6ZUL3 223 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 TCF24Q7RTU0 167 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 GLMPQ8WWB7 406 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 WFDC12Q8WWY7 111 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 DUX3Q96PT4 197 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 ASCL2Q99929 193 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 RPP21Q9H633 154 aaKnown RBP10.05□□□□□ -0.8
VRK3-205ENST00000593919 IGHV7-4-1A0A0J9YVY3 117 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 A0A1W2PRX2 142 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 LINC01619G3V211 115 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 K7EMT4 169 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 IGLV2-11P01706 119 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 SLURP1P55000 103 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 LINC00310P59036 64 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 DAZAP1Q96EP5 407 aaKnown RBP10.05□□□□□ -0.8
VRK3-205ENST00000593919 ZNF492Q9P255 531 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 UFC1Q9Y3C8 167 aa10.05□□□□□ -0.8
VRK3-205ENST00000593919 TMEM213A2RRL7 107 aa10.04□□□□□ -0.8
VRK3-205ENST00000593919 C19orf71A6NCJ1 209 aa10.04□□□□□ -0.8
VRK3-205ENST00000593919 A8MWP6 167 aa10.04□□□□□ -0.8
VRK3-205ENST00000593919 APCSP02743 223 aa10.04□□□□□ -0.8
VRK3-205ENST00000593919 TSSC4Q9Y5U2 329 aaPredicted RBP10.04□□□□□ -0.8
VRK3-205ENST00000593919 A0A087X0K7 114 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 A0A1W2PS18 150 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 ZNF785A8K8V0 405 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 M0R3E3 92 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 LGALS9O00182 355 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 SRIP30626 198 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 KLF5Q13887 457 aaPredicted RBP10.03□□□□□ -0.8
VRK3-205ENST00000593919 LYPD1Q8N2G4 141 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 OR1N2Q8NGR9 330 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 DPF1Q92782 380 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 RHPN1-AS1Q9BWJ2 59 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 PRO1933Q9H354 126 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 K7EQM0 130 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 CHEK1O14757 476 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 SCGB1D1O95968 90 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 Q0VG73 95 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 SLAQ13239 276 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms