RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 UQCC1Q9NVA1 299 aa11.18□□□□□ -0.62
LIG1-205ENST00000593425 TNFRSF18Q9Y5U5 241 aa11.18□□□□□ -0.62
LIG1-205ENST00000593425 HERC1Q15751 4861 aa11.18□□□□□ -0.62
LIG1-205ENST00000593425 CENPXA8MT69 81 aa11.17□□□□□ -0.62
LIG1-205ENST00000593425 FAM25EA8MYX2 175 aa11.17□□□□□ -0.62
LIG1-205ENST00000593425 EPM2AB3EWF7 344 aa11.17□□□□□ -0.62
LIG1-205ENST00000593425 IGHV3-53P01767 116 aa11.17□□□□□ -0.62
LIG1-205ENST00000593425 PYYP10082 97 aa11.17□□□□□ -0.62
LIG1-205ENST00000593425 RPL29P47914 159 aaKnown RBP11.17□□□□□ -0.62
LIG1-205ENST00000593425 ZNF846Q147U1 533 aa11.17□□□□□ -0.62
LIG1-205ENST00000593425 PRR9Q5T870 116 aa11.17□□□□□ -0.62
LIG1-205ENST00000593425 Q6ZQT7 251 aa11.17□□□□□ -0.62
LIG1-205ENST00000593425 EXOC3-AS1Q8N2X6 119 aa11.17□□□□□ -0.62
LIG1-205ENST00000593425 TP53TG3Q9ULZ0 132 aa11.17□□□□□ -0.62
LIG1-205ENST00000593425 ICOSQ9Y6W8 199 aa11.17□□□□□ -0.62
LIG1-205ENST00000593425 PAX4O43316 350 aa11.16□□□□□ -0.62
LIG1-205ENST00000593425 IL7P13232 177 aa11.16□□□□□ -0.62
LIG1-205ENST00000593425 RNASE4P34096 147 aaKnown RBP11.16□□□□□ -0.62
LIG1-205ENST00000593425 BAXQ07812 192 aa11.16□□□□□ -0.62
LIG1-205ENST00000593425 ST6GAL2Q96JF0 529 aa11.16□□□□□ -0.62
LIG1-205ENST00000593425 LINC00477Q96M19 166 aa11.16□□□□□ -0.62
LIG1-205ENST00000593425 MRPL16Q9NX20 251 aaKnown RBP11.16□□□□□ -0.62
LIG1-205ENST00000593425 TMEM14CQ9P0S9 112 aa11.16□□□□□ -0.62
LIG1-205ENST00000593425 IGKV2-40A0A087WW87 121 aaPredicted RBP11.15□□□□□ -0.62
LIG1-205ENST00000593425 IGSF23A1L1A6 192 aa11.15□□□□□ -0.62
LIG1-205ENST00000593425 MPDU1O75352 247 aa11.15□□□□□ -0.62
LIG1-205ENST00000593425 IGKV2D-40P01614 121 aaPredicted RBP11.15□□□□□ -0.62
LIG1-205ENST00000593425 HIST1H1EP10412 219 aaKnown RBP11.15□□□□□ -0.62
LIG1-205ENST00000593425 CRISP2P16562 243 aa11.15□□□□□ -0.62
LIG1-205ENST00000593425 XGP55808 180 aa11.15□□□□□ -0.62
LIG1-205ENST00000593425 IBA57Q5T440 356 aaKnown RBP11.15□□□□□ -0.62
LIG1-205ENST00000593425 C12orf45Q8N5I9 185 aaPredicted RBP11.15□□□□□ -0.62
LIG1-205ENST00000593425 ZFAND2AQ8N6M9 145 aa11.15□□□□□ -0.62
LIG1-205ENST00000593425 BLNKQ8WV28 456 aa11.15□□□□□ -0.62
LIG1-205ENST00000593425 PRELID1Q9Y255 219 aa11.15□□□□□ -0.62
LIG1-205ENST00000593425 TIMM9Q9Y5J7 89 aa11.15□□□□□ -0.62
LIG1-205ENST00000593425 FAT1Q14517 4588 aa11.15□□□□□ -0.62
LIG1-205ENST00000593425 C5orf51A6NDU8 294 aa11.14□□□□□ -0.63
LIG1-205ENST00000593425 PLA2G10O15496 165 aa11.14□□□□□ -0.63
LIG1-205ENST00000593425 GPX1P07203 203 aa11.14□□□□□ -0.63
LIG1-205ENST00000593425 DNAH10OSP0CZ25 163 aa11.14□□□□□ -0.63
LIG1-205ENST00000593425 SULT1A1P50225 295 aa11.14□□□□□ -0.63
LIG1-205ENST00000593425 ERVFC1-1P60608 527 aa11.14□□□□□ -0.63
LIG1-205ENST00000593425 PDE6HQ13956 83 aa11.14□□□□□ -0.63
LIG1-205ENST00000593425 GCSAMLQ5JQS6 135 aa11.14□□□□□ -0.63
LIG1-205ENST00000593425 C9orf47Q6ZRZ4 202 aa11.14□□□□□ -0.63
LIG1-205ENST00000593425 LYPD1Q8N2G4 141 aa11.14□□□□□ -0.63
LIG1-205ENST00000593425 SEC22CQ9BRL7 303 aa11.14□□□□□ -0.63
LIG1-205ENST00000593425 LYRM2Q9NU23 88 aaPredicted RBP11.14□□□□□ -0.63
LIG1-205ENST00000593425 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
LIG1-205ENST00000593425 TRAV6A0A075B6T7 132 aa11.13□□□□□ -0.63
LIG1-205ENST00000593425 FGF7P21781 194 aa11.13□□□□□ -0.63
LIG1-205ENST00000593425 CRYBA4P53673 196 aa11.13□□□□□ -0.63
LIG1-205ENST00000593425 S100A10P60903 97 aa11.13□□□□□ -0.63
LIG1-205ENST00000593425 ICAM4Q14773 271 aa11.13□□□□□ -0.63
LIG1-205ENST00000593425 CNPY1Q3B7I2 92 aa11.13□□□□□ -0.63
LIG1-205ENST00000593425 LYPD5Q6UWN5 251 aa11.13□□□□□ -0.63
LIG1-205ENST00000593425 TMEM252Q8N6L7 170 aa11.13□□□□□ -0.63
LIG1-205ENST00000593425 CHAC2Q8WUX2 184 aa11.13□□□□□ -0.63
LIG1-205ENST00000593425 VGLL1Q99990 258 aa11.13□□□□□ -0.63
LIG1-205ENST00000593425 SLC25A2Q9BXI2 301 aa11.13□□□□□ -0.63
LIG1-205ENST00000593425 PRO0255Q9UI72 69 aa11.13□□□□□ -0.63
LIG1-205ENST00000593425 IGHV1OR15-1A0A075B7D0 117 aa11.12□□□□□ -0.63
LIG1-205ENST00000593425 RGS13O14921 159 aa11.12□□□□□ -0.63
LIG1-205ENST00000593425 EREGO14944 169 aa11.12□□□□□ -0.63
LIG1-205ENST00000593425 PVALBP20472 110 aaPredicted RBP11.12□□□□□ -0.63
LIG1-205ENST00000593425 S100A11P31949 105 aa11.12□□□□□ -0.63
LIG1-205ENST00000593425 FHL2Q14192 279 aa11.12□□□□□ -0.63
LIG1-205ENST00000593425 CDPF1Q6NVV7 123 aa11.12□□□□□ -0.63
LIG1-205ENST00000593425 FAM122CQ6P4D5 195 aa11.12□□□□□ -0.63
LIG1-205ENST00000593425 C2orf50Q96LR7 162 aa11.12□□□□□ -0.63
LIG1-205ENST00000593425 C8orf49Q96NF6 230 aa11.12□□□□□ -0.63
LIG1-205ENST00000593425 ZNF492Q9P255 531 aa11.12□□□□□ -0.63
LIG1-205ENST00000593425 A0A087WTM6 91 aa11.11□□□□□ -0.63
LIG1-205ENST00000593425 LYRM1O43325 122 aa11.11□□□□□ -0.63
LIG1-205ENST00000593425 PRAF2O60831 178 aa11.11□□□□□ -0.63
LIG1-205ENST00000593425 TCRBP04435 133 aa11.11□□□□□ -0.63
LIG1-205ENST00000593425 NMBP08949 121 aa11.11□□□□□ -0.63
LIG1-205ENST00000593425 INAFM2P0DMQ5 153 aa11.11□□□□□ -0.63
LIG1-205ENST00000593425 KRTAP10-1P60331 282 aa11.11□□□□□ -0.63
LIG1-205ENST00000593425 IL15RAQ13261 267 aa11.11□□□□□ -0.63
LIG1-205ENST00000593425 RAB32Q13637 225 aa11.11□□□□□ -0.63
LIG1-205ENST00000593425 TMEM78Q5T7P6 136 aa11.11□□□□□ -0.63
LIG1-205ENST00000593425 STX12Q86Y82 276 aa11.11□□□□□ -0.63
LIG1-205ENST00000593425 FAM167A-AS1Q96KT0 104 aa11.11□□□□□ -0.63
LIG1-205ENST00000593425 ARPC5LQ9BPX5 153 aa11.11□□□□□ -0.63
LIG1-205ENST00000593425 AAMDCQ9H7C9 122 aa11.11□□□□□ -0.63
LIG1-205ENST00000593425 PTTG2Q9NZH5 202 aa11.11□□□□□ -0.63
LIG1-205ENST00000593425 HHLA3Q9XRX5 114 aa11.11□□□□□ -0.63
LIG1-205ENST00000593425 HBG1P69891 147 aa11.1□□□□□ -0.63
LIG1-205ENST00000593425 HBG2P69892 147 aa11.1□□□□□ -0.63
LIG1-205ENST00000593425 MRPL23Q16540 153 aaKnown RBP11.1□□□□□ -0.63
LIG1-205ENST00000593425 Q5VSD8 79 aa11.1□□□□□ -0.63
LIG1-205ENST00000593425 MIR17HGQ75NE6 70 aa11.1□□□□□ -0.63
LIG1-205ENST00000593425 Q8TAT8 98 aa11.1□□□□□ -0.63
LIG1-205ENST00000593425 NPCDR1Q9BY65 106 aa11.1□□□□□ -0.63
LIG1-205ENST00000593425 NUDT15Q9NV35 164 aa11.1□□□□□ -0.63
LIG1-205ENST00000593425 ZNF415Q09FC8 603 aa11.09□□□□□ -0.63
LIG1-205ENST00000593425 NEGR1Q7Z3B1 354 aa11.09□□□□□ -0.63
LIG1-205ENST00000593425 NFE4Q86UQ8 179 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms