RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 ODF3Q96PU9 254 aa10.84□□□□□ -0.67
DDX39A-221ENST00000593026 VGLL1Q99990 258 aa10.84□□□□□ -0.67
DDX39A-221ENST00000593026 AGPAT4-IT1Q9H0P7 198 aa10.84□□□□□ -0.67
DDX39A-221ENST00000593026 EDA2RQ9HAV5 297 aa10.84□□□□□ -0.67
DDX39A-221ENST00000593026 GOLT1BQ9Y3E0 138 aa10.84□□□□□ -0.67
DDX39A-221ENST00000593026 STAB2Q8WWQ8 2551 aa10.84□□□□□ -0.67
DDX39A-221ENST00000593026 A0A1B0GV50 99 aa10.83□□□□□ -0.68
DDX39A-221ENST00000593026 A0A1W2PRE2 83 aa10.83□□□□□ -0.68
DDX39A-221ENST00000593026 MIFP14174 115 aa10.83□□□□□ -0.68
DDX39A-221ENST00000593026 UBE2G2P60604 165 aa10.83□□□□□ -0.68
DDX39A-221ENST00000593026 SUMO1P63165 101 aaKnown RBP10.83□□□□□ -0.68
DDX39A-221ENST00000593026 GNG5P63218 68 aa10.83□□□□□ -0.68
DDX39A-221ENST00000593026 ZNF705AQ6ZN79 300 aaPredicted RBP10.83□□□□□ -0.68
DDX39A-221ENST00000593026 GOLT1AQ6ZVE7 132 aa10.83□□□□□ -0.68
DDX39A-221ENST00000593026 ARL6IP6Q8N6S5 226 aa10.83□□□□□ -0.68
DDX39A-221ENST00000593026 C5orf17Q8NAS9 161 aa10.83□□□□□ -0.68
DDX39A-221ENST00000593026 TMEM208Q9BTX3 173 aa10.83□□□□□ -0.68
DDX39A-221ENST00000593026 BOLA1Q9Y3E2 137 aa10.83□□□□□ -0.68
DDX39A-221ENST00000593026 X6R8D5 127 aa10.83□□□□□ -0.68
DDX39A-221ENST00000593026 A0A0J9YWU9 116 aa10.82□□□□□ -0.68
DDX39A-221ENST00000593026 ZNF138P52744 262 aa10.82□□□□□ -0.68
DDX39A-221ENST00000593026 C1orf158Q8N1D5 194 aa10.82□□□□□ -0.68
DDX39A-221ENST00000593026 YTHDF2Q9Y5A9 579 aaKnown RBP10.82□□□□□ -0.68
DDX39A-221ENST00000593026 IGHV4-28A0A0C4DH34 117 aa10.81□□□□□ -0.68
DDX39A-221ENST00000593026 SERTM2A0A1B0GWG4 89 aa10.81□□□□□ -0.68
DDX39A-221ENST00000593026 FAM74A7A6NL05 159 aa10.81□□□□□ -0.68
DDX39A-221ENST00000593026 J3KRW8 73 aa10.81□□□□□ -0.68
DDX39A-221ENST00000593026 Q8NAQ8 132 aa10.81□□□□□ -0.68
DDX39A-221ENST00000593026 Q8TAT8 98 aa10.81□□□□□ -0.68
DDX39A-221ENST00000593026 FAM19A4Q96LR4 140 aa10.81□□□□□ -0.68
DDX39A-221ENST00000593026 NEU1Q99519 415 aa10.81□□□□□ -0.68
DDX39A-221ENST00000593026 NKX6-2Q9C056 277 aaPredicted RBP10.81□□□□□ -0.68
DDX39A-221ENST00000593026 C11orf68Q9H3H3 251 aaKnown RBP10.81□□□□□ -0.68
DDX39A-221ENST00000593026 ZNF492Q9P255 531 aa10.81□□□□□ -0.68
DDX39A-221ENST00000593026 SMIM9A6NGZ8 99 aa10.8□□□□□ -0.68
DDX39A-221ENST00000593026 TEX46H3BTG2 121 aa10.8□□□□□ -0.68
DDX39A-221ENST00000593026 K7EQM0 130 aa10.8□□□□□ -0.68
DDX39A-221ENST00000593026 DEFB4AO15263 64 aa10.8□□□□□ -0.68
DDX39A-221ENST00000593026 IFNA7P01567 189 aa10.8□□□□□ -0.68
DDX39A-221ENST00000593026 TCRAP04437 139 aa10.8□□□□□ -0.68
DDX39A-221ENST00000593026 KIR3DS1Q14943 382 aa10.8□□□□□ -0.68
DDX39A-221ENST00000593026 GFI1BQ5VTD9 330 aa10.8□□□□□ -0.68
DDX39A-221ENST00000593026 ALKAL2Q6UX46 152 aa10.8□□□□□ -0.68
DDX39A-221ENST00000593026 EPDR1Q9UM22 224 aa10.8□□□□□ -0.68
DDX39A-221ENST00000593026 ARL2-SNX15V9GYD0 113 aa10.8□□□□□ -0.68
DDX39A-221ENST00000593026 TRAV1-1A0A0B4J248 108 aa10.79□□□□□ -0.68
DDX39A-221ENST00000593026 TRBV7-9A0A0J9YWB2 115 aa10.79□□□□□ -0.68
DDX39A-221ENST00000593026 HBE1P02100 147 aa10.79□□□□□ -0.68
DDX39A-221ENST00000593026 NMBP08949 121 aa10.79□□□□□ -0.68
DDX39A-221ENST00000593026 RBMY1A1P0DJD3 496 aaKnown RBP10.79□□□□□ -0.68
DDX39A-221ENST00000593026 RBMY1CP0DJD4 496 aa10.79□□□□□ -0.68
DDX39A-221ENST00000593026 CRISP2P16562 243 aa10.79□□□□□ -0.68
DDX39A-221ENST00000593026 RBMY1FQ15415 496 aaKnown RBP10.79□□□□□ -0.68
DDX39A-221ENST00000593026 CST9LP1Q5W188 147 aa10.79□□□□□ -0.68
DDX39A-221ENST00000593026 TMEM256Q8N2U0 113 aa10.79□□□□□ -0.68
DDX39A-221ENST00000593026 C20orf144Q9BQM9 153 aa10.79□□□□□ -0.68
DDX39A-221ENST00000593026 ATG101Q9BSB4 218 aa10.79□□□□□ -0.68
DDX39A-221ENST00000593026 TRAV8-1A0A0A6YYK1 113 aa10.78□□□□□ -0.68
DDX39A-221ENST00000593026 KLLNB2CW77 178 aa10.78□□□□□ -0.68
DDX39A-221ENST00000593026 PAGE4O60829 102 aa10.78□□□□□ -0.68
DDX39A-221ENST00000593026 GPX1P07203 203 aa10.78□□□□□ -0.68
DDX39A-221ENST00000593026 PPT1P50897 306 aa10.78□□□□□ -0.68
DDX39A-221ENST00000593026 RRN3P1Q2M238 152 aa10.78□□□□□ -0.68
DDX39A-221ENST00000593026 ZFAND2AQ8N6M9 145 aa10.78□□□□□ -0.68
DDX39A-221ENST00000593026 CYB561D1Q8N8Q1 229 aa10.78□□□□□ -0.68
DDX39A-221ENST00000593026 LINC01587Q99440 93 aa10.78□□□□□ -0.68
DDX39A-221ENST00000593026 LENEPQ9Y5L5 61 aa10.78□□□□□ -0.68
DDX39A-221ENST00000593026 TRAV12-3A0A0B4J271 114 aa10.77□□□□□ -0.69
DDX39A-221ENST00000593026 C7orf71A4D174 169 aa10.77□□□□□ -0.69
DDX39A-221ENST00000593026 H7BYZ3 331 aa10.77□□□□□ -0.69
DDX39A-221ENST00000593026 PEX7O00628 323 aa10.77□□□□□ -0.69
DDX39A-221ENST00000593026 RNASE4P34096 147 aaKnown RBP10.77□□□□□ -0.69
DDX39A-221ENST00000593026 ATP5G3P48201 142 aa10.77□□□□□ -0.69
DDX39A-221ENST00000593026 BTN1A1Q13410 526 aa10.77□□□□□ -0.69
DDX39A-221ENST00000593026 MUC7Q8TAX7 377 aa10.77□□□□□ -0.69
DDX39A-221ENST00000593026 TCEAL7Q9BRU2 100 aa10.77□□□□□ -0.69
DDX39A-221ENST00000593026 NIPSNAP3BQ9BS92 247 aa10.77□□□□□ -0.69
DDX39A-221ENST00000593026 TMEM189A5PLL7 270 aa10.76□□□□□ -0.69
DDX39A-221ENST00000593026 ZNF705GA8MUZ8 300 aaPredicted RBP10.76□□□□□ -0.69
DDX39A-221ENST00000593026 F6UZH7 168 aa10.76□□□□□ -0.69
DDX39A-221ENST00000593026 TAS2R60P59551 318 aa10.76□□□□□ -0.69
DDX39A-221ENST00000593026 CCL20P78556 96 aa10.76□□□□□ -0.69
DDX39A-221ENST00000593026 TMEM75Q8N9X5 138 aa10.76□□□□□ -0.69
DDX39A-221ENST00000593026 IL17DQ8TAD2 202 aa10.76□□□□□ -0.69
DDX39A-221ENST00000593026 HIST1H2BAQ96A08 127 aa10.76□□□□□ -0.69
DDX39A-221ENST00000593026 SGK494Q96LW2 274 aa10.76□□□□□ -0.69
DDX39A-221ENST00000593026 NDFIP1Q9BT67 221 aa10.76□□□□□ -0.69
DDX39A-221ENST00000593026 MANBALQ9NQG1 85 aa10.76□□□□□ -0.69
DDX39A-221ENST00000593026 GNG13Q9P2W3 67 aa10.76□□□□□ -0.69
DDX39A-221ENST00000593026 LOC102723971A0A1B0GUV8 181 aa10.75□□□□□ -0.69
DDX39A-221ENST00000593026 FBLL1A6NHQ2 334 aaKnown RBP10.75□□□□□ -0.69
DDX39A-221ENST00000593026 HTN1P15515 57 aa10.75□□□□□ -0.69
DDX39A-221ENST00000593026 FLI1Q01543 452 aaPredicted RBP10.75□□□□□ -0.69
DDX39A-221ENST00000593026 PRR9Q5T870 116 aa10.75□□□□□ -0.69
DDX39A-221ENST00000593026 CCDC28AQ8IWP9 274 aa10.75□□□□□ -0.69
DDX39A-221ENST00000593026 TREM1Q9NP99 234 aa10.75□□□□□ -0.69
DDX39A-221ENST00000593026 PSG8Q9UQ74 426 aa10.75□□□□□ -0.69
DDX39A-221ENST00000593026 IGLV2-11P01706 119 aa10.74□□□□□ -0.69
DDX39A-221ENST00000593026 EMP1P54849 157 aa10.74□□□□□ -0.69
DDX39A-221ENST00000593026 BLOC1S1P78537 153 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms