RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 UBE2L6O14933 153 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 IGLV2-23P01705 113 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 SCGB1C2P0DMR2 95 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 NFYBP25208 207 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 SDC2P34741 201 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 POLR2IP36954 125 aaKnown RBP4.21□□□□□ -1.74
VMP1-215ENST00000592619 INSL3P51460 131 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 CRISP3P54108 245 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 LINC00313P59037 77 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 TMEM258P61165 79 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 RBMY1FQ15415 496 aaKnown RBP4.21□□□□□ -1.74
VMP1-215ENST00000592619 TMEM183BQ1AE95 376 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 RRN3P1Q2M238 152 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 SLC48A1Q6P1K1 146 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 IGFL3Q6UXB1 125 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 LINC00596Q86U02 117 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 TMEM183AQ8IXX5 376 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 ZNF709Q8N972 641 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 APCDD1LQ8NCL9 501 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 SCGB1C1Q8TD33 95 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 DPH3Q96FX2 82 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 ZNF436Q9C0F3 470 aaPredicted RBP4.21□□□□□ -1.74
VMP1-215ENST00000592619 PARP12Q9H0J9 701 aaKnown RBP4.21□□□□□ -1.74
VMP1-215ENST00000592619 TUBA4BQ9H853 241 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 ZNF586Q9NXT0 402 aa4.21□□□□□ -1.74
VMP1-215ENST00000592619 ZNF443Q9Y2A4 671 aaPredicted RBP4.21□□□□□ -1.74
VMP1-215ENST00000592619 TPRP12270 2363 aaKnown RBP4.2□□□□□ -1.74
VMP1-215ENST00000592619 DYSFO75923 2080 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 IGSF10Q6WRI0 2623 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 TRAV27A0A087WT01 109 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 ZNF727A8MUV8 499 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 G3V3Q6 166 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 M0R1X1 148 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 HLA-DQB1P01920 261 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 PMP2P02689 132 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 IGKV3-11P04433 115 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 IFI6P09912 130 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 LINC00032P0C843 101 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 IGLC1P0CG04 106 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 CA7P43166 264 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 RPL38P63173 70 aaKnown RBP4.2□□□□□ -1.74
VMP1-215ENST00000592619 NOXRED1Q6NXP6 359 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 MORN3Q6PF18 240 aaPredicted RBP4.2□□□□□ -1.74
VMP1-215ENST00000592619 SLC25A34Q6PIV7 304 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 LCA10Q71F78 164 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 SVBPQ8N300 66 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 ZFP62Q8NB50 900 aaPredicted RBP4.2□□□□□ -1.74
VMP1-215ENST00000592619 PSMF1Q92530 271 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 CKLFQ9UBR5 152 aa4.2□□□□□ -1.74
VMP1-215ENST00000592619 TNRC6AQ8NDV7 1962 aaKnown RBP4.2□□□□□ -1.74
VMP1-215ENST00000592619 TRAV41A0A0B4J266 112 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 IGHV3-64DA0A0J9YX35 117 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 FAM236AA0A1B0GUQ0 79 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 FAM236BA0A1B0GV22 79 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 TCRBV3S1A0A5B6 114 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 B4DEV8 164 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 COX7A2LO14548 114 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 CD5LO43866 347 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 IFITM1P13164 125 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 IL3RAP26951 378 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 GABARAPL2P60520 117 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 RPL23P62829 140 aaKnown RBP4.19□□□□□ -1.74
VMP1-215ENST00000592619 KLRD1Q13241 179 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 Q6ZS92 163 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 LINC00305Q7Z4B0 112 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 KCNRGQ8N5I3 272 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 RPP25LQ8N5L8 163 aaKnown RBP4.19□□□□□ -1.74
VMP1-215ENST00000592619 OR4K13Q8NH42 304 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 CIB3Q96Q77 187 aaPredicted RBP4.19□□□□□ -1.74
VMP1-215ENST00000592619 S100A13Q99584 98 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 BANF2Q9H503 90 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 BET1LQ9NYM9 111 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 MARCOQ9UEW3 520 aaPredicted RBP4.19□□□□□ -1.74
VMP1-215ENST00000592619 SCN2AQ99250 2005 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 SEC16AO15027 2179 aa4.19□□□□□ -1.74
VMP1-215ENST00000592619 TRAV17A0A0B4J275 112 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 PINLYPA6NC86 204 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 A6NDX4 124 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 COLCA2A8K830 154 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 IGLL5B9A064 214 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 K7EM74 188 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 TAX1BP3O14907 124 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 RER1O15258 196 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 NAPSAO96009 420 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 CLPSP04118 112 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 LINC00869P0C866 280 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 CRYBB3P26998 211 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 CXCL5P42830 114 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 NUDT2P50583 147 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 HES1Q14469 280 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 PEA15Q15121 130 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 IQCJQ1A5X6 159 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 RSPO1Q2MKA7 263 aaPredicted RBP4.18□□□□□ -1.74
VMP1-215ENST00000592619 SP6Q3SY56 376 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 EBLN2Q6P2I7 272 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 TRAPPC6BQ86SZ2 158 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 Q8N9W7 124 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 HYLS1Q96M11 299 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 SLC25A2Q9BXI2 301 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms