RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	TAS2R30	P59541	319 aa		12.42	□□□□□ -0.42
CIRBP-238	ENST00000592412	CD300C	Q08708	224 aa		12.42	□□□□□ -0.42
CIRBP-238	ENST00000592412	ERCC8	Q13216	396 aa		12.42	□□□□□ -0.42
CIRBP-238	ENST00000592412	IAH1	Q2TAA2	248 aa	Predicted RBP	12.42	□□□□□ -0.42
CIRBP-238	ENST00000592412	C10orf113	Q5VZT2	155 aa		12.42	□□□□□ -0.42
CIRBP-238	ENST00000592412	ZNF680	Q8NEM1	530 aa		12.42	□□□□□ -0.42
CIRBP-238	ENST00000592412	LINC00467	Q9BRT7	94 aa		12.42	□□□□□ -0.42
CIRBP-238	ENST00000592412	C7orf66	A4D0T2	115 aa		12.41	□□□□□ -0.42
CIRBP-238	ENST00000592412	C7orf71	A4D174	169 aa		12.41	□□□□□ -0.42
CIRBP-238	ENST00000592412		M0R3E3	92 aa		12.41	□□□□□ -0.42
CIRBP-238	ENST00000592412	SCGB1D2	O95969	90 aa		12.41	□□□□□ -0.42
CIRBP-238	ENST00000592412	SLC25A5	P05141	298 aa	Known RBP	12.41	□□□□□ -0.42
CIRBP-238	ENST00000592412	BTN1A1	Q13410	526 aa		12.41	□□□□□ -0.42
CIRBP-238	ENST00000592412	ANXA2R	Q3ZCQ2	193 aa		12.41	□□□□□ -0.42
CIRBP-238	ENST00000592412	NRARP	Q7Z6K4	114 aa		12.41	□□□□□ -0.42
CIRBP-238	ENST00000592412	C12orf45	Q8N5I9	185 aa	Predicted RBP	12.41	□□□□□ -0.42
CIRBP-238	ENST00000592412	FRZB	Q92765	325 aa		12.41	□□□□□ -0.42
CIRBP-238	ENST00000592412	GGACT	Q9BVM4	153 aa		12.41	□□□□□ -0.42
CIRBP-238	ENST00000592412	ICOS	Q9Y6W8	199 aa		12.41	□□□□□ -0.42
CIRBP-238	ENST00000592412	CCS	O14618	274 aa		12.4	□□□□□ -0.42
CIRBP-238	ENST00000592412	EREG	O14944	169 aa		12.4	□□□□□ -0.42
CIRBP-238	ENST00000592412	SMR3B	P02814	79 aa	Predicted RBP	12.4	□□□□□ -0.42
CIRBP-238	ENST00000592412	TCL1A	P56279	114 aa		12.4	□□□□□ -0.42
CIRBP-238	ENST00000592412		Q6ZQT7	251 aa		12.4	□□□□□ -0.42
CIRBP-238	ENST00000592412	EIF4E3	Q8N5X7	224 aa	Known RBP	12.4	□□□□□ -0.42
CIRBP-238	ENST00000592412	GSKIP	Q9P0R6	139 aa		12.4	□□□□□ -0.42
CIRBP-238	ENST00000592412	FAM25E	A8MYX2	175 aa		12.39	□□□□□ -0.43
CIRBP-238	ENST00000592412	PAX4	O43316	350 aa		12.39	□□□□□ -0.43
CIRBP-238	ENST00000592412	IGHV3-53	P01767	116 aa		12.39	□□□□□ -0.43
CIRBP-238	ENST00000592412	GUK1	Q16774	197 aa		12.39	□□□□□ -0.43
CIRBP-238	ENST00000592412	PRR9	Q5T870	116 aa		12.39	□□□□□ -0.43
CIRBP-238	ENST00000592412	MIC13	Q5XKP0	118 aa		12.39	□□□□□ -0.43
CIRBP-238	ENST00000592412	LYPD5	Q6UWN5	251 aa		12.39	□□□□□ -0.43
CIRBP-238	ENST00000592412	ST6GAL2	Q96JF0	529 aa		12.39	□□□□□ -0.43
CIRBP-238	ENST00000592412	GPN1	Q9HCN4	374 aa	Predicted RBP	12.39	□□□□□ -0.43
CIRBP-238	ENST00000592412	DNAJC4	Q9NNZ3	241 aa		12.39	□□□□□ -0.43
CIRBP-238	ENST00000592412	MDFIC	Q9P1T7	246 aa		12.39	□□□□□ -0.43
CIRBP-238	ENST00000592412	TP53TG3	Q9ULZ0	132 aa		12.39	□□□□□ -0.43
CIRBP-238	ENST00000592412	ZNF253	O75346	499 aa		12.38	□□□□□ -0.43
CIRBP-238	ENST00000592412	NDUFB4	O95168	129 aa		12.38	□□□□□ -0.43
CIRBP-238	ENST00000592412	MBP	P02686	304 aa	Predicted RBP	12.38	□□□□□ -0.43
CIRBP-238	ENST00000592412	CAMLG	P49069	296 aa		12.38	□□□□□ -0.43
CIRBP-238	ENST00000592412	ICAM4	Q14773	271 aa		12.38	□□□□□ -0.43
CIRBP-238	ENST00000592412	MRPL53	Q96EL3	112 aa	Known RBP	12.38	□□□□□ -0.43
CIRBP-238	ENST00000592412	AGPAT4-IT1	Q9H0P7	198 aa		12.38	□□□□□ -0.43
CIRBP-238	ENST00000592412	TRBV19	A0A075B6N1	114 aa		12.37	□□□□□ -0.43
CIRBP-238	ENST00000592412	C5orf51	A6NDU8	294 aa		12.37	□□□□□ -0.43
CIRBP-238	ENST00000592412	INMT-MINDY4	F8WBC2	141 aa		12.37	□□□□□ -0.43
CIRBP-238	ENST00000592412	CRYBA4	P53673	196 aa		12.37	□□□□□ -0.43
CIRBP-238	ENST00000592412	HAMP	P81172	84 aa		12.37	□□□□□ -0.43
CIRBP-238	ENST00000592412	FHL2	Q14192	279 aa		12.37	□□□□□ -0.43
CIRBP-238	ENST00000592412	NFE4	Q86UQ8	179 aa		12.37	□□□□□ -0.43
CIRBP-238	ENST00000592412	MRPL16	Q9NX20	251 aa	Known RBP	12.37	□□□□□ -0.43
CIRBP-238	ENST00000592412	PRO0255	Q9UI72	69 aa		12.37	□□□□□ -0.43
CIRBP-238	ENST00000592412	PRAF2	O60831	178 aa		12.36	□□□□□ -0.43
CIRBP-238	ENST00000592412	CRISP2	P16562	243 aa		12.36	□□□□□ -0.43
CIRBP-238	ENST00000592412	RNASE4	P34096	147 aa	Known RBP	12.36	□□□□□ -0.43
CIRBP-238	ENST00000592412	IBA57	Q5T440	356 aa	Known RBP	12.36	□□□□□ -0.43
CIRBP-238	ENST00000592412	WFDC10B	Q8IUB3	73 aa		12.36	□□□□□ -0.43
CIRBP-238	ENST00000592412	ZFAND2A	Q8N6M9	145 aa		12.36	□□□□□ -0.43
CIRBP-238	ENST00000592412	C8orf49	Q96NF6	230 aa		12.36	□□□□□ -0.43
CIRBP-238	ENST00000592412	VGLL1	Q99990	258 aa		12.36	□□□□□ -0.43
CIRBP-238	ENST00000592412	MARVELD1	Q9BSK0	173 aa		12.36	□□□□□ -0.43
CIRBP-238	ENST00000592412	IFNA5	P01569	189 aa		12.35	□□□□□ -0.43
CIRBP-238	ENST00000592412		Q6ZRG5	221 aa		12.35	□□□□□ -0.43
CIRBP-238	ENST00000592412	C2orf50	Q96LR7	162 aa		12.35	□□□□□ -0.43
CIRBP-238	ENST00000592412	LINC00477	Q96M19	166 aa		12.35	□□□□□ -0.43
CIRBP-238	ENST00000592412	C11orf1	Q9H5F2	150 aa		12.35	□□□□□ -0.43
CIRBP-238	ENST00000592412	WDR83OS	Q9Y284	106 aa		12.35	□□□□□ -0.43
CIRBP-238	ENST00000592412	MPDU1	O75352	247 aa		12.34	□□□□□ -0.43
CIRBP-238	ENST00000592412	EXOC3-AS1	Q8N2X6	119 aa		12.34	□□□□□ -0.43
CIRBP-238	ENST00000592412	OR1L4	Q8NGR5	311 aa		12.34	□□□□□ -0.43
CIRBP-238	ENST00000592412	HHLA3	Q9XRX5	114 aa		12.34	□□□□□ -0.43
CIRBP-238	ENST00000592412	LY96	Q9Y6Y9	160 aa		12.34	□□□□□ -0.43
CIRBP-238	ENST00000592412	CST7	O76096	145 aa		12.33	□□□□□ -0.44
CIRBP-238	ENST00000592412	PYY	P10082	97 aa		12.33	□□□□□ -0.44
CIRBP-238	ENST00000592412	GCSH	P23434	173 aa		12.33	□□□□□ -0.44
CIRBP-238	ENST00000592412	MRPL23	Q16540	153 aa	Known RBP	12.33	□□□□□ -0.44
CIRBP-238	ENST00000592412	VWC2	Q2TAL6	325 aa		12.33	□□□□□ -0.44
CIRBP-238	ENST00000592412	C9orf47	Q6ZRZ4	202 aa		12.33	□□□□□ -0.44
CIRBP-238	ENST00000592412	NEGR1	Q7Z3B1	354 aa		12.33	□□□□□ -0.44
CIRBP-238	ENST00000592412	MSRB1	Q9NZV6	116 aa		12.33	□□□□□ -0.44
CIRBP-238	ENST00000592412	TMEM14C	Q9P0S9	112 aa		12.33	□□□□□ -0.44
CIRBP-238	ENST00000592412	LSM5	Q9Y4Y9	91 aa	Known RBP	12.33	□□□□□ -0.44
CIRBP-238	ENST00000592412	HMCN2	Q8NDA2	5059 aa		12.33	□□□□□ -0.44
CIRBP-238	ENST00000592412	IGHV1OR15-1	A0A075B7D0	117 aa		12.32	□□□□□ -0.44
CIRBP-238	ENST00000592412	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	12.32	□□□□□ -0.44
CIRBP-238	ENST00000592412		K7EQD1	137 aa		12.32	□□□□□ -0.44
CIRBP-238	ENST00000592412		L7N2F9	121 aa		12.32	□□□□□ -0.44
CIRBP-238	ENST00000592412	IGKV2D-40	P01614	121 aa	Predicted RBP	12.32	□□□□□ -0.44
CIRBP-238	ENST00000592412	GPX1	P07203	203 aa		12.32	□□□□□ -0.44
CIRBP-238	ENST00000592412	RPL29	P47914	159 aa	Known RBP	12.32	□□□□□ -0.44
CIRBP-238	ENST00000592412	VAMP2	P63027	116 aa		12.32	□□□□□ -0.44
CIRBP-238	ENST00000592412	PFDN5	Q99471	154 aa		12.32	□□□□□ -0.44
CIRBP-238	ENST00000592412	SLC39A9	Q9NUM3	307 aa		12.32	□□□□□ -0.44
CIRBP-238	ENST00000592412	LRP1	Q07954	4544 aa	Known RBP	12.32	□□□□□ -0.44
CIRBP-238	ENST00000592412	FAM24A	A6NFZ4	105 aa		12.31	□□□□□ -0.44
CIRBP-238	ENST00000592412	NMB	P08949	121 aa		12.31	□□□□□ -0.44
CIRBP-238	ENST00000592412	HIST1H1E	P10412	219 aa	Known RBP	12.31	□□□□□ -0.44
CIRBP-238	ENST00000592412	SLA	Q13239	276 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms