RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 C16orf90A8MZG2 172 aa13.09□□□□□ -0.31
CCDC43-205ENST00000592333 CRISP2P16562 243 aa13.09□□□□□ -0.31
CCDC43-205ENST00000592333 HOXA5P20719 270 aa13.09□□□□□ -0.31
CCDC43-205ENST00000592333 S100A10P60903 97 aa13.09□□□□□ -0.31
CCDC43-205ENST00000592333 RAB32Q13637 225 aa13.09□□□□□ -0.31
CCDC43-205ENST00000592333 C9orf47Q6ZRZ4 202 aa13.09□□□□□ -0.31
CCDC43-205ENST00000592333 AAMDCQ9H7C9 122 aa13.09□□□□□ -0.31
CCDC43-205ENST00000592333 TIMM9Q9Y5J7 89 aa13.09□□□□□ -0.31
CCDC43-205ENST00000592333 FAM240BA0A1B0GVZ2 78 aa13.08□□□□□ -0.32
CCDC43-205ENST00000592333 ZNF324O75467 553 aaPredicted RBP13.08□□□□□ -0.32
CCDC43-205ENST00000592333 NDUFB4O95168 129 aa13.08□□□□□ -0.32
CCDC43-205ENST00000592333 PRB4P10163 310 aaPredicted RBP13.08□□□□□ -0.32
CCDC43-205ENST00000592333 FGF7P21781 194 aa13.08□□□□□ -0.32
CCDC43-205ENST00000592333 MZT2BQ6NZ67 158 aa13.08□□□□□ -0.32
CCDC43-205ENST00000592333 NPCDR1Q9BY65 106 aa13.08□□□□□ -0.32
CCDC43-205ENST00000592333 MRPS16Q9Y3D3 137 aaKnown RBP13.08□□□□□ -0.32
CCDC43-205ENST00000592333 RYR1P21817 5038 aa13.08□□□□□ -0.32
CCDC43-205ENST00000592333 TRBV7-9A0A0J9YWB2 115 aa13.07□□□□□ -0.32
CCDC43-205ENST00000592333 ESRGQ1W209 222 aa13.07□□□□□ -0.32
CCDC43-205ENST00000592333 IBA57Q5T440 356 aaKnown RBP13.07□□□□□ -0.32
CCDC43-205ENST00000592333 EIF4E3Q8N5X7 224 aaKnown RBP13.07□□□□□ -0.32
CCDC43-205ENST00000592333 C11orf72Q8NBR9 251 aa13.07□□□□□ -0.32
CCDC43-205ENST00000592333 KCNIP2Q9NS61 270 aa13.07□□□□□ -0.32
CCDC43-205ENST00000592333 J3KRW8 73 aa13.06□□□□□ -0.32
CCDC43-205ENST00000592333 M0R3E3 92 aa13.06□□□□□ -0.32
CCDC43-205ENST00000592333 Q6ZTI0 123 aa13.06□□□□□ -0.32
CCDC43-205ENST00000592333 SLC25A31Q9H0C2 315 aa13.06□□□□□ -0.32
CCDC43-205ENST00000592333 AGPAT4-IT1Q9H0P7 198 aa13.06□□□□□ -0.32
CCDC43-205ENST00000592333 GPN1Q9HCN4 374 aaPredicted RBP13.06□□□□□ -0.32
CCDC43-205ENST00000592333 TRGV2A0A075B6R0 118 aa13.05□□□□□ -0.32
CCDC43-205ENST00000592333 A0A0J9YY99 117 aa13.05□□□□□ -0.32
CCDC43-205ENST00000592333 TMPRSS5Q9H3S3 457 aa13.05□□□□□ -0.32
CCDC43-205ENST00000592333 GSN-AS1Q9NRJ2 163 aa13.05□□□□□ -0.32
CCDC43-205ENST00000592333 GPX1P07203 203 aa13.04□□□□□ -0.32
CCDC43-205ENST00000592333 TCL1AP56279 114 aa13.04□□□□□ -0.32
CCDC43-205ENST00000592333 SLAQ13239 276 aa13.04□□□□□ -0.32
CCDC43-205ENST00000592333 ASAH1Q13510 395 aa13.04□□□□□ -0.32
CCDC43-205ENST00000592333 TMEM78Q5T7P6 136 aa13.04□□□□□ -0.32
CCDC43-205ENST00000592333 S100ZQ8WXG8 99 aa13.04□□□□□ -0.32
CCDC43-205ENST00000592333 MRPL32Q9BYC8 188 aaKnown RBP13.04□□□□□ -0.32
CCDC43-205ENST00000592333 NMES1Q9C002 83 aa13.04□□□□□ -0.32
CCDC43-205ENST00000592333 E5RGE8 158 aa13.03□□□□□ -0.32
CCDC43-205ENST00000592333 SPINK4O60575 86 aa13.03□□□□□ -0.32
CCDC43-205ENST00000592333 NBEAP1P0C6P0 100 aa13.03□□□□□ -0.32
CCDC43-205ENST00000592333 PYYP10082 97 aa13.03□□□□□ -0.32
CCDC43-205ENST00000592333 CYCSP99999 105 aaKnown RBP13.03□□□□□ -0.32
CCDC43-205ENST00000592333 ERCC8Q13216 396 aa13.03□□□□□ -0.32
CCDC43-205ENST00000592333 VSIG2Q96IQ7 327 aa13.03□□□□□ -0.32
CCDC43-205ENST00000592333 SLC25A2Q9BXI2 301 aa13.03□□□□□ -0.32
CCDC43-205ENST00000592333 FUT9Q9Y231 359 aa13.03□□□□□ -0.32
CCDC43-205ENST00000592333 A0A096LPF7 62 aa13.02□□□□□ -0.33
CCDC43-205ENST00000592333 CD300CQ08708 224 aa13.02□□□□□ -0.33
CCDC43-205ENST00000592333 ICAM4Q14773 271 aa13.02□□□□□ -0.33
CCDC43-205ENST00000592333 LYPD1Q8N2G4 141 aa13.02□□□□□ -0.33
CCDC43-205ENST00000592333 EXOC3-AS1Q8N2X6 119 aa13.02□□□□□ -0.33
CCDC43-205ENST00000592333 OR5C1Q8NGR4 320 aa13.02□□□□□ -0.33
CCDC43-205ENST00000592333 BLNKQ8WV28 456 aa13.02□□□□□ -0.33
CCDC43-205ENST00000592333 ST6GAL2Q96JF0 529 aa13.02□□□□□ -0.33
CCDC43-205ENST00000592333 FAM167A-AS1Q96KT0 104 aa13.02□□□□□ -0.33
CCDC43-205ENST00000592333 OR51M1Q9H341 326 aa13.02□□□□□ -0.33
CCDC43-205ENST00000592333 ZNF492Q9P255 531 aa13.02□□□□□ -0.33
CCDC43-205ENST00000592333 TRGV1A0A0A0MS02 117 aa13.01□□□□□ -0.33
CCDC43-205ENST00000592333 RBAKDNA6NC62 111 aa13.01□□□□□ -0.33
CCDC43-205ENST00000592333 RNASE4P34096 147 aaKnown RBP13.01□□□□□ -0.33
CCDC43-205ENST00000592333 NHLH2Q02577 135 aa13.01□□□□□ -0.33
CCDC43-205ENST00000592333 BTN1A1Q13410 526 aa13.01□□□□□ -0.33
CCDC43-205ENST00000592333 ZFAND2AQ8N6M9 145 aa13.01□□□□□ -0.33
CCDC43-205ENST00000592333 KRTAP1-5Q9BYS1 174 aa13.01□□□□□ -0.33
CCDC43-205ENST00000592333 C17orf112F2Z3M2 114 aa13□□□□□ -0.33
CCDC43-205ENST00000592333 RGS13O14921 159 aa13□□□□□ -0.33
CCDC43-205ENST00000592333 GCSAMLQ5JQS6 135 aa13□□□□□ -0.33
CCDC43-205ENST00000592333 WDR61Q9GZS3 305 aaKnown RBP13□□□□□ -0.33
CCDC43-205ENST00000592333 IGHV1OR15-1A0A075B7D0 117 aa12.99□□□□□ -0.33
CCDC43-205ENST00000592333 PRAF2O60831 178 aa12.99□□□□□ -0.33
CCDC43-205ENST00000592333 ZNF138P52744 262 aa12.99□□□□□ -0.33
CCDC43-205ENST00000592333 SPATA12Q7Z6I5 190 aa12.99□□□□□ -0.33
CCDC43-205ENST00000592333 THAP6Q8TBB0 222 aa12.99□□□□□ -0.33
CCDC43-205ENST00000592333 VGLL1Q99990 258 aa12.99□□□□□ -0.33
CCDC43-205ENST00000592333 PAXXQ9BUH6 204 aa12.99□□□□□ -0.33
CCDC43-205ENST00000592333 PRO0255Q9UI72 69 aa12.99□□□□□ -0.33
CCDC43-205ENST00000592333 KLF12Q9Y4X4 402 aa12.99□□□□□ -0.33
CCDC43-205ENST00000592333 ABCA13Q86UQ4 5058 aa12.99□□□□□ -0.33
CCDC43-205ENST00000592333 CSN1S1P47710 185 aa12.98□□□□□ -0.33
CCDC43-205ENST00000592333 FAM122CQ6P4D5 195 aa12.98□□□□□ -0.33
CCDC43-205ENST00000592333 MIR17HGQ75NE6 70 aa12.98□□□□□ -0.33
CCDC43-205ENST00000592333 ENKURQ8TC29 256 aa12.98□□□□□ -0.33
CCDC43-205ENST00000592333 FXYD5Q96DB9 178 aa12.98□□□□□ -0.33
CCDC43-205ENST00000592333 ARPC5LQ9BPX5 153 aa12.98□□□□□ -0.33
CCDC43-205ENST00000592333 LENEPQ9Y5L5 61 aa12.98□□□□□ -0.33
CCDC43-205ENST00000592333 ICOSQ9Y6W8 199 aa12.98□□□□□ -0.33
CCDC43-205ENST00000592333 HSPG2P98160 4391 aa12.97□□□□□ -0.33
CCDC43-205ENST00000592333 K7EP13 123 aa12.97□□□□□ -0.33
CCDC43-205ENST00000592333 SIVA1O15304 175 aa12.97□□□□□ -0.33
CCDC43-205ENST00000592333 PAX4O43316 350 aa12.97□□□□□ -0.33
CCDC43-205ENST00000592333 KRTAP4-5Q9BYR2 181 aa12.97□□□□□ -0.33
CCDC43-205ENST00000592333 LRP1BQ9NZR2 4599 aa12.96□□□□□ -0.33
CCDC43-205ENST00000592333 IGKV2-40A0A087WW87 121 aaPredicted RBP12.96□□□□□ -0.33
CCDC43-205ENST00000592333 IGKV2D-40P01614 121 aaPredicted RBP12.96□□□□□ -0.33
CCDC43-205ENST00000592333 ZNF415Q09FC8 603 aa12.96□□□□□ -0.33
CCDC43-205ENST00000592333 ZNF266Q14584 549 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms