RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 NKX6-2Q9C056 277 aaPredicted RBP7.07□□□□□ -1.28
TPM4-215ENST00000592138 MAP1LC3BQ9GZQ8 125 aa7.07□□□□□ -1.28
TPM4-215ENST00000592138 C11orf68Q9H3H3 251 aaKnown RBP7.07□□□□□ -1.28
TPM4-215ENST00000592138 PPP1R14DQ9NXH3 145 aa7.07□□□□□ -1.28
TPM4-215ENST00000592138 XCL2Q9UBD3 114 aa7.07□□□□□ -1.28
TPM4-215ENST00000592138 PGPA6NDG6 321 aa7.06□□□□□ -1.28
TPM4-215ENST00000592138 SMIM9A6NGZ8 99 aa7.06□□□□□ -1.28
TPM4-215ENST00000592138 DIRC3C9JPN6 131 aa7.06□□□□□ -1.28
TPM4-215ENST00000592138 CRXO43186 299 aaPredicted RBP7.06□□□□□ -1.28
TPM4-215ENST00000592138 ATP6V1G1O75348 118 aa7.06□□□□□ -1.28
TPM4-215ENST00000592138 INSP01308 110 aa7.06□□□□□ -1.28
TPM4-215ENST00000592138 NMBP08949 121 aa7.06□□□□□ -1.28
TPM4-215ENST00000592138 FHITP49789 147 aa7.06□□□□□ -1.28
TPM4-215ENST00000592138 SPINK13Q1W4C9 94 aa7.06□□□□□ -1.28
TPM4-215ENST00000592138 TMEM256Q8N2U0 113 aa7.06□□□□□ -1.28
TPM4-215ENST00000592138 CMTM2Q8TAZ6 248 aa7.06□□□□□ -1.28
TPM4-215ENST00000592138 FAM19A4Q96LR4 140 aa7.06□□□□□ -1.28
TPM4-215ENST00000592138 TCEAL7Q9BRU2 100 aa7.06□□□□□ -1.28
TPM4-215ENST00000592138 GOLT1BQ9Y3E0 138 aa7.06□□□□□ -1.28
TPM4-215ENST00000592138 M0R2Z0 102 aa7.05□□□□□ -1.28
TPM4-215ENST00000592138 CT45A10P0DMU9 189 aa7.05□□□□□ -1.28
TPM4-215ENST00000592138 CRISP2P16562 243 aa7.05□□□□□ -1.28
TPM4-215ENST00000592138 LEPP41159 167 aa7.05□□□□□ -1.28
TPM4-215ENST00000592138 SULT1A2P50226 295 aa7.05□□□□□ -1.28
TPM4-215ENST00000592138 TMEM78Q5T7P6 136 aa7.05□□□□□ -1.28
TPM4-215ENST00000592138 Q8NAQ8 132 aa7.05□□□□□ -1.28
TPM4-215ENST00000592138 C5orf17Q8NAS9 161 aa7.05□□□□□ -1.28
TPM4-215ENST00000592138 FAM213BQ8TBF2 198 aa7.05□□□□□ -1.28
TPM4-215ENST00000592138 LENEPQ9Y5L5 61 aa7.05□□□□□ -1.28
TPM4-215ENST00000592138 X6R8D5 127 aa7.05□□□□□ -1.28
TPM4-215ENST00000592138 CSMD3Q7Z407 3707 aa7.04□□□□□ -1.28
TPM4-215ENST00000592138 IGKV2-40A0A087WW87 121 aaPredicted RBP7.04□□□□□ -1.28
TPM4-215ENST00000592138 TRAV1-1A0A0B4J248 108 aa7.04□□□□□ -1.28
TPM4-215ENST00000592138 FBLL1A6NHQ2 334 aaKnown RBP7.04□□□□□ -1.28
TPM4-215ENST00000592138 KLLNB2CW77 178 aa7.04□□□□□ -1.28
TPM4-215ENST00000592138 GGTLC3B5MD39 225 aa7.04□□□□□ -1.28
TPM4-215ENST00000592138 IGKV2D-40P01614 121 aaPredicted RBP7.04□□□□□ -1.28
TPM4-215ENST00000592138 H2AFB1P0C5Y9 115 aa7.04□□□□□ -1.28
TPM4-215ENST00000592138 PPT1P50897 306 aa7.04□□□□□ -1.28
TPM4-215ENST00000592138 ZNF138P52744 262 aa7.04□□□□□ -1.28
TPM4-215ENST00000592138 FGF8P55075 233 aaPredicted RBP7.04□□□□□ -1.28
TPM4-215ENST00000592138 FXYD7P58549 80 aa7.04□□□□□ -1.28
TPM4-215ENST00000592138 IFITM2Q01629 132 aa7.04□□□□□ -1.28
TPM4-215ENST00000592138 IQCF2Q8IXL9 164 aa7.04□□□□□ -1.28
TPM4-215ENST00000592138 C1orf158Q8N1D5 194 aa7.04□□□□□ -1.28
TPM4-215ENST00000592138 SFT2D1Q8WV19 159 aa7.04□□□□□ -1.28
TPM4-215ENST00000592138 AGPAT4-IT1Q9H0P7 198 aa7.04□□□□□ -1.28
TPM4-215ENST00000592138 ZNF492Q9P255 531 aa7.04□□□□□ -1.28
TPM4-215ENST00000592138 A0A0J9YWU9 116 aa7.03□□□□□ -1.28
TPM4-215ENST00000592138 TMEM189A5PLL7 270 aa7.03□□□□□ -1.28
TPM4-215ENST00000592138 FAM74A7A6NL05 159 aa7.03□□□□□ -1.28
TPM4-215ENST00000592138 C3orf84H3BNL1 204 aa7.03□□□□□ -1.28
TPM4-215ENST00000592138 TEX46H3BTG2 121 aa7.03□□□□□ -1.28
TPM4-215ENST00000592138 K7EQM0 130 aa7.03□□□□□ -1.28
TPM4-215ENST00000592138 HBE1P02100 147 aa7.03□□□□□ -1.28
TPM4-215ENST00000592138 TCRAP04437 139 aa7.03□□□□□ -1.28
TPM4-215ENST00000592138 ERCC8Q13216 396 aa7.03□□□□□ -1.28
TPM4-215ENST00000592138 VGLL1Q99990 258 aa7.03□□□□□ -1.28
TPM4-215ENST00000592138 ATG101Q9BSB4 218 aa7.03□□□□□ -1.28
TPM4-215ENST00000592138 KRTAP17-1Q9BYP8 105 aa7.03□□□□□ -1.28
TPM4-215ENST00000592138 EPDR1Q9UM22 224 aa7.03□□□□□ -1.28
TPM4-215ENST00000592138 TENM2Q9NT68 2774 aa7.03□□□□□ -1.28
TPM4-215ENST00000592138 TRAV12-2A0A075B6T6 113 aa7.02□□□□□ -1.29
TPM4-215ENST00000592138 IGHV4-28A0A0C4DH34 117 aa7.02□□□□□ -1.29
TPM4-215ENST00000592138 H7BYZ3 331 aa7.02□□□□□ -1.29
TPM4-215ENST00000592138 NKX2-5P52952 324 aaPredicted RBP7.02□□□□□ -1.29
TPM4-215ENST00000592138 TAS2R60P59551 318 aa7.02□□□□□ -1.29
TPM4-215ENST00000592138 SUMO1P63165 101 aaKnown RBP7.02□□□□□ -1.29
TPM4-215ENST00000592138 PMS2P11Q13670 270 aa7.02□□□□□ -1.29
TPM4-215ENST00000592138 NDUFA5Q16718 116 aa7.02□□□□□ -1.29
TPM4-215ENST00000592138 GFI1BQ5VTD9 330 aa7.02□□□□□ -1.29
TPM4-215ENST00000592138 CCDC28AQ8IWP9 274 aa7.02□□□□□ -1.29
TPM4-215ENST00000592138 CYB561D1Q8N8Q1 229 aa7.02□□□□□ -1.29
TPM4-215ENST00000592138 TMEM75Q8N9X5 138 aa7.02□□□□□ -1.29
TPM4-215ENST00000592138 HIST1H2BAQ96A08 127 aa7.02□□□□□ -1.29
TPM4-215ENST00000592138 TMEM208Q9BTX3 173 aa7.02□□□□□ -1.29
TPM4-215ENST00000592138 TMPRSS5Q9H3S3 457 aa7.02□□□□□ -1.29
TPM4-215ENST00000592138 YTHDF2Q9Y5A9 579 aaKnown RBP7.02□□□□□ -1.29
TPM4-215ENST00000592138 AGRNO00468 2067 aa7.01□□□□□ -1.29
TPM4-215ENST00000592138 C7orf71A4D174 169 aa7.01□□□□□ -1.29
TPM4-215ENST00000592138 RBMY1A1P0DJD3 496 aaKnown RBP7.01□□□□□ -1.29
TPM4-215ENST00000592138 RBMY1CP0DJD4 496 aa7.01□□□□□ -1.29
TPM4-215ENST00000592138 PRB4P10163 310 aaPredicted RBP7.01□□□□□ -1.29
TPM4-215ENST00000592138 RBMY1FQ15415 496 aaKnown RBP7.01□□□□□ -1.29
TPM4-215ENST00000592138 RRN3P1Q2M238 152 aa7.01□□□□□ -1.29
TPM4-215ENST00000592138 GOLT1AQ6ZVE7 132 aa7.01□□□□□ -1.29
TPM4-215ENST00000592138 ZFAND2AQ8N6M9 145 aa7.01□□□□□ -1.29
TPM4-215ENST00000592138 MUC7Q8TAX7 377 aa7.01□□□□□ -1.29
TPM4-215ENST00000592138 TXNDC17Q9BRA2 123 aa7.01□□□□□ -1.29
TPM4-215ENST00000592138 PYGO2Q9BRQ0 406 aa7.01□□□□□ -1.29
TPM4-215ENST00000592138 LINC00467Q9BRT7 94 aa7.01□□□□□ -1.29
TPM4-215ENST00000592138 NIPSNAP3BQ9BS92 247 aa7.01□□□□□ -1.29
TPM4-215ENST00000592138 MANBALQ9NQG1 85 aa7.01□□□□□ -1.29
TPM4-215ENST00000592138 HYDINQ4G0P3 5121 aa7.01□□□□□ -1.29
TPM4-215ENST00000592138 IGHV3OR16-12A0A075B7B8 117 aa7□□□□□ -1.29
TPM4-215ENST00000592138 TEX48A0A1B0GUV7 120 aa7□□□□□ -1.29
TPM4-215ENST00000592138 F6UZH7 168 aa7□□□□□ -1.29
TPM4-215ENST00000592138 PEX7O00628 323 aa7□□□□□ -1.29
TPM4-215ENST00000592138 ZNF324O75467 553 aaPredicted RBP7□□□□□ -1.29
TPM4-215ENST00000592138 GPX1P07203 203 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 177.8 ms