RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 M0QZ24 198 aa12.08□□□□□ -0.48
MBD1-227ENST00000592060 M0R2Z0 102 aa12.08□□□□□ -0.48
MBD1-227ENST00000592060 BMI1P35226 326 aa12.08□□□□□ -0.48
MBD1-227ENST00000592060 LYZL1Q6UWQ5 148 aa12.08□□□□□ -0.48
MBD1-227ENST00000592060 ZNF493Q6ZR52 646 aa12.08□□□□□ -0.48
MBD1-227ENST00000592060 C8orf86Q6ZUL3 223 aa12.08□□□□□ -0.48
MBD1-227ENST00000592060 ZNF575Q86XF7 245 aa12.08□□□□□ -0.48
MBD1-227ENST00000592060 ZNF843Q8N446 348 aa12.08□□□□□ -0.48
MBD1-227ENST00000592060 CHCHD1Q96BP2 118 aaKnown RBP12.08□□□□□ -0.48
MBD1-227ENST00000592060 USMG5Q96IX5 58 aa12.08□□□□□ -0.48
MBD1-227ENST00000592060 FAM181BA6NEQ2 426 aa12.07□□□□□ -0.48
MBD1-227ENST00000592060 COX6B1P14854 86 aa12.07□□□□□ -0.48
MBD1-227ENST00000592060 CTRLP40313 264 aa12.07□□□□□ -0.48
MBD1-227ENST00000592060 RPS20P60866 119 aaKnown RBP12.07□□□□□ -0.48
MBD1-227ENST00000592060 LINC01356Q8N9X3 169 aa12.07□□□□□ -0.48
MBD1-227ENST00000592060 BORCS7Q96B45 105 aa12.07□□□□□ -0.48
MBD1-227ENST00000592060 VAMP8Q9BV40 100 aa12.07□□□□□ -0.48
MBD1-227ENST00000592060 TPPP3Q9BW30 176 aa12.07□□□□□ -0.48
MBD1-227ENST00000592060 NDUFA4O00483 81 aa12.07□□□□□ -0.48
MBD1-227ENST00000592060 CFHR3Q02985 330 aa12.07□□□□□ -0.48
MBD1-227ENST00000592060 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.06□□□□□ -0.482e-7■■■■□ 21.5
MBD1-227ENST00000592060 IGLV1-40P01703 118 aa12.06□□□□□ -0.48
MBD1-227ENST00000592060 IGLC6P0CF74 106 aa12.06□□□□□ -0.48
MBD1-227ENST00000592060 DMRTA1Q5VZB9 504 aa12.06□□□□□ -0.48
MBD1-227ENST00000592060 EBLN2Q6P2I7 272 aa12.06□□□□□ -0.48
MBD1-227ENST00000592060 UNQ9165/PRO28630Q6UXU0 137 aa12.06□□□□□ -0.48
MBD1-227ENST00000592060 KLK15Q9H2R5 256 aa12.06□□□□□ -0.48
MBD1-227ENST00000592060 PAM16Q9Y3D7 125 aa12.06□□□□□ -0.48
MBD1-227ENST00000592060 ZFHX3Q15911 3703 aa12.06□□□□□ -0.48
MBD1-227ENST00000592060 C2orf70A6NJV1 201 aa12.05□□□□□ -0.48
MBD1-227ENST00000592060 ZNF580Q9UK33 172 aa12.05□□□□□ -0.48
MBD1-227ENST00000592060 IGHV1-24A0A0C4DH33 117 aa12.05□□□□□ -0.48
MBD1-227ENST00000592060 TMEM213A2RRL7 107 aa12.05□□□□□ -0.48
MBD1-227ENST00000592060 IL17RELQ6ZVW7 336 aa12.05□□□□□ -0.48
MBD1-227ENST00000592060 AGPAT4-IT1Q9H0P7 198 aa12.05□□□□□ -0.48
MBD1-227ENST00000592060 SMAD7O15105 426 aaKnown RBP12.04□□□□□ -0.48
MBD1-227ENST00000592060 LINC01559Q495D7 138 aa12.04□□□□□ -0.48
MBD1-227ENST00000592060 FER1L6-AS1Q8NA97 138 aa12.04□□□□□ -0.48
MBD1-227ENST00000592060 FABP5P3A8MUU1 101 aa12.03□□□□□ -0.48
MBD1-227ENST00000592060 IGHV3-11P01762 117 aa12.03□□□□□ -0.48
MBD1-227ENST00000592060 LINC00614P0C842 121 aa12.03□□□□□ -0.48
MBD1-227ENST00000592060 PF4V1P10720 104 aa12.03□□□□□ -0.48
MBD1-227ENST00000592060 PLA2G2AP14555 144 aa12.03□□□□□ -0.48
MBD1-227ENST00000592060 DEFB112Q30KQ8 113 aa12.03□□□□□ -0.48
MBD1-227ENST00000592060 GPHB5Q86YW7 130 aa12.03□□□□□ -0.48
MBD1-227ENST00000592060 LURAP1LQ8IV03 231 aa12.03□□□□□ -0.48
MBD1-227ENST00000592060 CLEC5AQ9NY25 188 aa12.03□□□□□ -0.48
MBD1-227ENST00000592060 U3KQK5 164 aa12.03□□□□□ -0.48
MBD1-227ENST00000592060 SPG11Q96JI7 2443 aa12.03□□□□□ -0.48
MBD1-227ENST00000592060 A1L4Q6 167 aa12.03□□□□□ -0.48
MBD1-227ENST00000592060 J3QLI3 93 aa12.03□□□□□ -0.48
MBD1-227ENST00000592060 PMCHL1Q16048 86 aa12.03□□□□□ -0.48
MBD1-227ENST00000592060 C9orf47Q6ZRZ4 202 aa12.03□□□□□ -0.48
MBD1-227ENST00000592060 C9orf139Q6ZV77 190 aa12.03□□□□□ -0.48
MBD1-227ENST00000592060 BTF3P20290 206 aaKnown RBP12.02□□□□□ -0.49
MBD1-227ENST00000592060 ZNF138P52744 262 aa12.02□□□□□ -0.49
MBD1-227ENST00000592060 FAM104BQ5XKR9 115 aa12.02□□□□□ -0.49
MBD1-227ENST00000592060 LCNL1Q6ZST4 164 aa12.02□□□□□ -0.49
MBD1-227ENST00000592060 OR4X2Q8NGF9 303 aa12.02□□□□□ -0.49
MBD1-227ENST00000592060 PPP1R14DQ9NXH3 145 aa12.02□□□□□ -0.49
MBD1-227ENST00000592060 SOCS3O14543 225 aa12.01□□□□□ -0.49
MBD1-227ENST00000592060 EREGO14944 169 aa12.01□□□□□ -0.49
MBD1-227ENST00000592060 IGHV4-59P01825 116 aa12.01□□□□□ -0.49
MBD1-227ENST00000592060 RAB4AP20338 218 aa12.01□□□□□ -0.49
MBD1-227ENST00000592060 CYB5R2Q6BCY4 276 aa12.01□□□□□ -0.49
MBD1-227ENST00000592060 SPATA12Q7Z6I5 190 aa12.01□□□□□ -0.49
MBD1-227ENST00000592060 C20orf173Q96LM9 149 aa12.01□□□□□ -0.49
MBD1-227ENST00000592060 MIEN1Q9BRT3 115 aa12.01□□□□□ -0.49
MBD1-227ENST00000592060 C2orf88Q9BSF0 95 aa12.01□□□□□ -0.49
MBD1-227ENST00000592060 CNFNQ9BYD5 112 aa12.01□□□□□ -0.49
MBD1-227ENST00000592060 CELSR1Q9NYQ6 3014 aa12.01□□□□□ -0.49
MBD1-227ENST00000592060 ORM1P02763 201 aa12.01□□□□□ -0.49
MBD1-227ENST00000592060 TMEM95Q3KNT9 176 aa12.01□□□□□ -0.49
MBD1-227ENST00000592060 LBHQ53QV2 105 aaPredicted RBP12.01□□□□□ -0.49
MBD1-227ENST00000592060 TMEM78Q5T7P6 136 aa12.01□□□□□ -0.49
MBD1-227ENST00000592060 C16orf92Q96LL3 132 aa12.01□□□□□ -0.49
MBD1-227ENST00000592060 CR1P17927 2039 aa12□□□□□ -0.49
MBD1-227ENST00000592060 MYO18BQ8IUG5 2567 aa12□□□□□ -0.49
MBD1-227ENST00000592060 MUC21A0A0G2JKD1 596 aa12□□□□□ -0.49
MBD1-227ENST00000592060 A0A0G2JLM5 398 aa12□□□□□ -0.49
MBD1-227ENST00000592060 MUC21A0A140T8X8 626 aa12□□□□□ -0.49
MBD1-227ENST00000592060 HIST1H1AQ02539 215 aaPredicted RBP12□□□□□ -0.49
MBD1-227ENST00000592060 LOXL1Q08397 574 aaPredicted RBP12□□□□□ -0.49
MBD1-227ENST00000592060 MUC21Q5SSG8 566 aa12□□□□□ -0.49
MBD1-227ENST00000592060 LINC00173Q6ZV60 143 aa12□□□□□ -0.49
MBD1-227ENST00000592060 AMN1Q8IY45 258 aa12□□□□□ -0.49
MBD1-227ENST00000592060 NPFFR1Q9GZQ6 430 aa12□□□□□ -0.49
MBD1-227ENST00000592060 C11orf21Q9P2W6 132 aa12□□□□□ -0.49
MBD1-227ENST00000592060 FSHBP01225 129 aa11.99□□□□□ -0.49
MBD1-227ENST00000592060 CSN3P07498 182 aa11.99□□□□□ -0.49
MBD1-227ENST00000592060 SPATA45Q537H7 98 aa11.99□□□□□ -0.49
MBD1-227ENST00000592060 MAPK1IP1LQ8NDC0 245 aa11.99□□□□□ -0.49
MBD1-227ENST00000592060 HECTD1Q9ULT8 2610 aa11.99□□□□□ -0.49
MBD1-227ENST00000592060 IGKV3D-20A0A0C4DH25 116 aa11.99□□□□□ -0.49
MBD1-227ENST00000592060 D6R8Y8 96 aa11.99□□□□□ -0.49
MBD1-227ENST00000592060 TGFAP01135 160 aa11.99□□□□□ -0.49
MBD1-227ENST00000592060 KRTAP10-9P60411 292 aa11.99□□□□□ -0.49
MBD1-227ENST00000592060 MRPL51Q4U2R6 128 aaKnown RBP11.99□□□□□ -0.49
MBD1-227ENST00000592060 TMEM70Q9BUB7 260 aa11.99□□□□□ -0.49
MBD1-227ENST00000592060 SNHG12Q9BXW3 62 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms