RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 SIVA1O15304 175 aa8.47□□□□□ -1.05
VPS4B-206ENST00000591475 CKS2P33552 79 aa8.47□□□□□ -1.05
VPS4B-206ENST00000591475 HSD52Q0P140 79 aa8.47□□□□□ -1.05
VPS4B-206ENST00000591475 KLF17Q5JT82 389 aaPredicted RBP8.47□□□□□ -1.05
VPS4B-206ENST00000591475 GTF2H5Q6ZYL4 71 aa8.47□□□□□ -1.05
VPS4B-206ENST00000591475 SMIM15Q7Z3B0 74 aa8.47□□□□□ -1.05
VPS4B-206ENST00000591475 UBTD1Q9HAC8 227 aa8.47□□□□□ -1.05
VPS4B-206ENST00000591475 S4R3C0 116 aa8.47□□□□□ -1.05
VPS4B-206ENST00000591475 IGKV2-40A0A087WW87 121 aaPredicted RBP8.46□□□□□ -1.05
VPS4B-206ENST00000591475 C9orf118A6NHY6 69 aa8.46□□□□□ -1.05
VPS4B-206ENST00000591475 K7ERU9 68 aa8.46□□□□□ -1.05
VPS4B-206ENST00000591475 NDUFA3O95167 84 aa8.46□□□□□ -1.05
VPS4B-206ENST00000591475 IGKV2D-40P01614 121 aaPredicted RBP8.46□□□□□ -1.05
VPS4B-206ENST00000591475 PAX8Q06710 450 aa8.46□□□□□ -1.05
VPS4B-206ENST00000591475 BCL6BQ8N143 479 aaPredicted RBP8.46□□□□□ -1.05
VPS4B-206ENST00000591475 FER1L6-AS1Q8NA97 138 aa8.46□□□□□ -1.05
VPS4B-206ENST00000591475 NPBQ8NG41 125 aa8.46□□□□□ -1.05
VPS4B-206ENST00000591475 OR4X2Q8NGF9 303 aa8.46□□□□□ -1.05
VPS4B-206ENST00000591475 IFI27L1Q96BM0 104 aa8.46□□□□□ -1.05
VPS4B-206ENST00000591475 PRR25Q96S07 402 aa8.46□□□□□ -1.05
VPS4B-206ENST00000591475 DPM3Q9P2X0 92 aa8.46□□□□□ -1.05
VPS4B-206ENST00000591475 TENM4Q6N022 2769 aa8.46□□□□□ -1.06
VPS4B-206ENST00000591475 IGLV11-55A0A075B6I3 123 aa8.46□□□□□ -1.06
VPS4B-206ENST00000591475 NPIPB5A8MRT5 1133 aa8.46□□□□□ -1.06
VPS4B-206ENST00000591475 COX6B1P14854 86 aa8.46□□□□□ -1.06
VPS4B-206ENST00000591475 RPL7P18124 248 aaKnown RBP8.46□□□□□ -1.06
VPS4B-206ENST00000591475 BMI1P35226 326 aa8.46□□□□□ -1.06
VPS4B-206ENST00000591475 CEACAM3P40198 252 aa8.46□□□□□ -1.06
VPS4B-206ENST00000591475 TWIST1Q15672 202 aa8.46□□□□□ -1.06
VPS4B-206ENST00000591475 CFHR4Q92496 578 aa8.46□□□□□ -1.06
VPS4B-206ENST00000591475 NPFFR1Q9GZQ6 430 aa8.46□□□□□ -1.06
VPS4B-206ENST00000591475 THYN1Q9P016 225 aa8.46□□□□□ -1.06
VPS4B-206ENST00000591475 HILPDAQ9Y5L2 63 aa8.46□□□□□ -1.06
VPS4B-206ENST00000591475 NPYP01303 97 aa8.45□□□□□ -1.06
VPS4B-206ENST00000591475 EGR2P11161 476 aaPredicted RBP8.45□□□□□ -1.06
VPS4B-206ENST00000591475 FANCD2OSQ96PS1 177 aa8.45□□□□□ -1.06
VPS4B-206ENST00000591475 CRYBG3Q68DQ2 2970 aa8.45□□□□□ -1.06
VPS4B-206ENST00000591475 SMKR1H3BMG3 65 aa8.44□□□□□ -1.06
VPS4B-206ENST00000591475 FXYD7P58549 80 aa8.44□□□□□ -1.06
VPS4B-206ENST00000591475 C5orf64Q2M2E5 130 aa8.44□□□□□ -1.06
VPS4B-206ENST00000591475 UFSP1Q6NVU6 142 aa8.44□□□□□ -1.06
VPS4B-206ENST00000591475 LY6G5BQ8NDX9 201 aa8.44□□□□□ -1.06
VPS4B-206ENST00000591475 OR11H6Q8NGC7 330 aa8.44□□□□□ -1.06
VPS4B-206ENST00000591475 C21orf62Q9NYP8 219 aa8.44□□□□□ -1.06
VPS4B-206ENST00000591475 ABCA1O95477 2261 aa8.44□□□□□ -1.06
VPS4B-206ENST00000591475 HELZ2Q9BYK8 2649 aaKnown RBP8.44□□□□□ -1.06
VPS4B-206ENST00000591475 TACC2O95359 2948 aa8.44□□□□□ -1.06
VPS4B-206ENST00000591475 USP9YO00507 2555 aaPredicted RBP8.44□□□□□ -1.06
VPS4B-206ENST00000591475 NDUFS7O75251 213 aa8.44□□□□□ -1.06
VPS4B-206ENST00000591475 SCGB2A1O75556 95 aa8.44□□□□□ -1.06
VPS4B-206ENST00000591475 IGLC6P0CF74 106 aa8.44□□□□□ -1.06
VPS4B-206ENST00000591475 SRSF2Q01130 221 aaKnown RBP8.44□□□□□ -1.06
VPS4B-206ENST00000591475 HES1Q14469 280 aa8.44□□□□□ -1.06
VPS4B-206ENST00000591475 KIR3DS1Q14943 382 aa8.44□□□□□ -1.06
VPS4B-206ENST00000591475 ARPC1AQ92747 370 aa8.44□□□□□ -1.06
VPS4B-206ENST00000591475 MAP1LC3AQ9H492 121 aa8.44□□□□□ -1.06
VPS4B-206ENST00000591475 F8W735 103 aaPredicted RBP8.43□□□□□ -1.06
VPS4B-206ENST00000591475 H3BUT2 72 aa8.43□□□□□ -1.06
VPS4B-206ENST00000591475 NMUP48645 174 aa8.43□□□□□ -1.06
VPS4B-206ENST00000591475 ZNF80P51504 273 aaPredicted RBP8.43□□□□□ -1.06
VPS4B-206ENST00000591475 TCTAP57738 103 aa8.43□□□□□ -1.06
VPS4B-206ENST00000591475 PSMG4Q5JS54 123 aa8.43□□□□□ -1.06
VPS4B-206ENST00000591475 ADAMTSL5Q6ZMM2 481 aa8.43□□□□□ -1.06
VPS4B-206ENST00000591475 TTC9CQ8N5M4 171 aa8.43□□□□□ -1.06
VPS4B-206ENST00000591475 A0A0G2JLM5 398 aa8.42□□□□□ -1.06
VPS4B-206ENST00000591475 A0A1W2PRD5 423 aa8.42□□□□□ -1.06
VPS4B-206ENST00000591475 A0A1W2PRF3 423 aa8.42□□□□□ -1.06
VPS4B-206ENST00000591475 A0A1W2PRM7 423 aa8.42□□□□□ -1.06
VPS4B-206ENST00000591475 K7EP34 96 aa8.42□□□□□ -1.06
VPS4B-206ENST00000591475 S100A7P31151 101 aa8.42□□□□□ -1.06
VPS4B-206ENST00000591475 ZNF562Q6V9R5 426 aa8.42□□□□□ -1.06
VPS4B-206ENST00000591475 Q8TAT8 98 aa8.42□□□□□ -1.06
VPS4B-206ENST00000591475 IGFBPL1Q8WX77 278 aa8.42□□□□□ -1.06
VPS4B-206ENST00000591475 JMJD8Q96S16 334 aa8.42□□□□□ -1.06
VPS4B-206ENST00000591475 VGLL1Q99990 258 aa8.42□□□□□ -1.06
VPS4B-206ENST00000591475 LINC01546A6NGU7 62 aa8.42□□□□□ -1.06
VPS4B-206ENST00000591475 PIFOQ8TCI5 191 aa8.42□□□□□ -1.06
VPS4B-206ENST00000591475 DKK2Q9UBU2 259 aa8.42□□□□□ -1.06
VPS4B-206ENST00000591475 IGHV3-23P01764 117 aa8.41□□□□□ -1.06
VPS4B-206ENST00000591475 ORM1P02763 201 aa8.41□□□□□ -1.06
VPS4B-206ENST00000591475 KLRD1Q13241 179 aa8.41□□□□□ -1.06
VPS4B-206ENST00000591475 PCP2Q8IVA1 136 aa8.41□□□□□ -1.06
VPS4B-206ENST00000591475 RNF185Q96GF1 192 aa8.41□□□□□ -1.06
VPS4B-206ENST00000591475 CNFNQ9BYD5 112 aa8.41□□□□□ -1.06
VPS4B-206ENST00000591475 SMAD5-AS1Q9Y6J3 95 aa8.41□□□□□ -1.06
VPS4B-206ENST00000591475 FABP5P3A8MUU1 101 aa8.41□□□□□ -1.06
VPS4B-206ENST00000591475 ODF3BA8MYP8 253 aa8.41□□□□□ -1.06
VPS4B-206ENST00000591475 M0R1W7 72 aa8.41□□□□□ -1.06
VPS4B-206ENST00000591475 FCER1GP30273 86 aa8.41□□□□□ -1.06
VPS4B-206ENST00000591475 EFNA4P52798 201 aa8.41□□□□□ -1.06
VPS4B-206ENST00000591475 PRSS57Q6UWY2 283 aa8.41□□□□□ -1.06
VPS4B-206ENST00000591475 WFDC3Q8IUB2 231 aa8.41□□□□□ -1.06
VPS4B-206ENST00000591475 OR2K2Q8NGT1 345 aa8.41□□□□□ -1.06
VPS4B-206ENST00000591475 C18orf15Q96N68 181 aa8.41□□□□□ -1.06
VPS4B-206ENST00000591475 MEGF9Q9H1U4 602 aa8.41□□□□□ -1.06
VPS4B-206ENST00000591475 NXT2Q9NPJ8 142 aaKnown RBP8.41□□□□□ -1.06
VPS4B-206ENST00000591475 NCBP2LA6PVI3 153 aaKnown RBP8.4□□□□□ -1.06
VPS4B-206ENST00000591475 IGHG4P01861 327 aa8.4□□□□□ -1.06
VPS4B-206ENST00000591475 HLA-DMBP28068 263 aa8.4□□□□□ -1.06
VPS4B-206ENST00000591475 LEPP41159 167 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms