RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 IGLV2-8P01709 118 aa13.52□□□□□ -0.25
SMARCA4-215ENST00000590574 COX6CP09669 75 aa13.52□□□□□ -0.25
SMARCA4-215ENST00000590574 LINC00477Q96M19 166 aa13.52□□□□□ -0.25
SMARCA4-215ENST00000590574 DPH3P1Q9H4G8 78 aa13.52□□□□□ -0.25
SMARCA4-215ENST00000590574 MALRD1Q5VYJ5 2156 aa13.52□□□□□ -0.25
SMARCA4-215ENST00000590574 PLNP26678 52 aa13.52□□□□□ -0.25
SMARCA4-215ENST00000590574 HLA-DMBP28068 263 aa13.51□□□□□ -0.25
SMARCA4-215ENST00000590574 TNFRSF18Q9Y5U5 241 aa13.51□□□□□ -0.25
SMARCA4-215ENST00000590574 H7C1H1 209 aa13.51□□□□□ -0.25
SMARCA4-215ENST00000590574 IGKV1-17P01599 117 aa13.51□□□□□ -0.25
SMARCA4-215ENST00000590574 UBE2E1P51965 193 aa13.51□□□□□ -0.25
SMARCA4-215ENST00000590574 ABCA1O95477 2261 aa13.51□□□□□ -0.25
SMARCA4-215ENST00000590574 GRNP28799 593 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-215ENST00000590574 LGALS9BQ3B8N2 356 aa13.51□□□□□ -0.25
SMARCA4-215ENST00000590574 LGALS9CQ6DKI2 356 aa13.51□□□□□ -0.25
SMARCA4-215ENST00000590574 ZNF747Q9BV97 191 aa13.51□□□□□ -0.25
SMARCA4-215ENST00000590574 TMEM8BA6NDV4 472 aa13.5□□□□□ -0.25
SMARCA4-215ENST00000590574 K7EIM0 57 aa13.5□□□□□ -0.25
SMARCA4-215ENST00000590574 IGKV1D-37A0A075B6S9 117 aa13.5□□□□□ -0.25
SMARCA4-215ENST00000590574 FAM223BA6NKX1 122 aa13.5□□□□□ -0.25
SMARCA4-215ENST00000590574 SAMD13Q5VXD3 122 aa13.5□□□□□ -0.25
SMARCA4-215ENST00000590574 RUSC1-AS1Q66K80 236 aa13.5□□□□□ -0.25
SMARCA4-215ENST00000590574 FAM223AQ8IWN6 122 aa13.5□□□□□ -0.25
SMARCA4-215ENST00000590574 GEMIN7Q9H840 131 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-215ENST00000590574 KLF12Q9Y4X4 402 aa13.5□□□□□ -0.25
SMARCA4-215ENST00000590574 TRAV26-2A0A0B4J265 109 aa13.5□□□□□ -0.25
SMARCA4-215ENST00000590574 H3BUX3 64 aa13.5□□□□□ -0.25
SMARCA4-215ENST00000590574 CST9LQ9H4G1 147 aa13.5□□□□□ -0.25
SMARCA4-215ENST00000590574 DUX3Q96PT4 197 aa13.49□□□□□ -0.25
SMARCA4-215ENST00000590574 PRR14LQ5THK1 2151 aa13.49□□□□□ -0.25
SMARCA4-215ENST00000590574 TEX22C9J3V5 150 aa13.49□□□□□ -0.25
SMARCA4-215ENST00000590574 EGR2P11161 476 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-215ENST00000590574 IGF2-ASQ6U949 168 aa13.49□□□□□ -0.25
SMARCA4-215ENST00000590574 Q8N8P6 123 aa13.48□□□□□ -0.25
SMARCA4-215ENST00000590574 C8orf86Q6ZUL3 223 aa13.48□□□□□ -0.25
SMARCA4-215ENST00000590574 PRO3102Q9H379 93 aa13.48□□□□□ -0.25
SMARCA4-215ENST00000590574 CSTL1Q9H114 145 aa13.48□□□□□ -0.25
SMARCA4-215ENST00000590574 WNK2Q9Y3S1 2297 aa13.48□□□□□ -0.25
SMARCA4-215ENST00000590574 LINC00574Q9H8X3 128 aa13.48□□□□□ -0.25
SMARCA4-215ENST00000590574 H3BRM9 83 aa13.48□□□□□ -0.25
SMARCA4-215ENST00000590574 OCIAD2Q56VL3 154 aa13.48□□□□□ -0.25
SMARCA4-215ENST00000590574 TP53TG3Q9ULZ0 132 aa13.48□□□□□ -0.25
SMARCA4-215ENST00000590574 C22orf34Q6ZV56 151 aa13.47□□□□□ -0.25
SMARCA4-215ENST00000590574 EXPH5Q8NEV8 1989 aa13.47□□□□□ -0.25
SMARCA4-215ENST00000590574 ZGRF1Q86YA3 2104 aa13.47□□□□□ -0.25
SMARCA4-215ENST00000590574 FCN3O75636 299 aa13.47□□□□□ -0.25
SMARCA4-215ENST00000590574 NBASA2RRP1 2371 aa13.47□□□□□ -0.25
SMARCA4-215ENST00000590574 COL6A6A6NMZ7 2263 aa13.47□□□□□ -0.25
SMARCA4-215ENST00000590574 TRAV12-3A0A0B4J271 114 aa13.47□□□□□ -0.25
SMARCA4-215ENST00000590574 IGHV2-70DA0A0C4DH43 119 aa13.47□□□□□ -0.25
SMARCA4-215ENST00000590574 DTX2Q86UW9 622 aa13.47□□□□□ -0.25
SMARCA4-215ENST00000590574 RHPN1-AS1Q9BWJ2 59 aa13.46□□□□□ -0.25
SMARCA4-215ENST00000590574 VCX2Q9H322 139 aa13.46□□□□□ -0.25
SMARCA4-215ENST00000590574 DYNAPQ8N1N2 210 aa13.46□□□□□ -0.25
SMARCA4-215ENST00000590574 C9orf118A6NHY6 69 aa13.46□□□□□ -0.26
SMARCA4-215ENST00000590574 UBE2L6O14933 153 aa13.46□□□□□ -0.26
SMARCA4-215ENST00000590574 CCL25O15444 150 aa13.46□□□□□ -0.26
SMARCA4-215ENST00000590574 GAGE13Q4V321 117 aa13.46□□□□□ -0.26
SMARCA4-215ENST00000590574 DKK2Q9UBU2 259 aa13.46□□□□□ -0.26
SMARCA4-215ENST00000590574 NDUFS7O75251 213 aa13.46□□□□□ -0.26
SMARCA4-215ENST00000590574 OR11H6Q8NGC7 330 aa13.46□□□□□ -0.26
SMARCA4-215ENST00000590574 AKAP6Q13023 2319 aa13.45□□□□□ -0.26
SMARCA4-215ENST00000590574 Q8N7P7 452 aa13.45□□□□□ -0.26
SMARCA4-215ENST00000590574 IGHV3-64A0A075B6Q5 118 aa13.45□□□□□ -0.26
SMARCA4-215ENST00000590574 IGLV1-47P01700 117 aa13.45□□□□□ -0.26
SMARCA4-215ENST00000590574 GDF5OSQ5U4N7 250 aa13.45□□□□□ -0.26
SMARCA4-215ENST00000590574 USMG5Q96IX5 58 aa13.45□□□□□ -0.26
SMARCA4-215ENST00000590574 SPOCK3Q9BQ16 436 aa13.45□□□□□ -0.26
SMARCA4-215ENST00000590574 ZNF688P0C7X2 276 aa13.44□□□□□ -0.26
SMARCA4-215ENST00000590574 GNLYP22749 145 aa13.44□□□□□ -0.26
SMARCA4-215ENST00000590574 ITLN2Q8WWU7 325 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-215ENST00000590574 CIRBPQ14011 172 aaKnown RBP13.44□□□□□ -0.26
SMARCA4-215ENST00000590574 PSMB11A5LHX3 300 aa13.44□□□□□ -0.26
SMARCA4-215ENST00000590574 CRYGCP07315 174 aa13.44□□□□□ -0.26
SMARCA4-215ENST00000590574 HOXB4P17483 251 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-215ENST00000590574 C19orf54Q5BKX5 351 aa13.44□□□□□ -0.26
SMARCA4-215ENST00000590574 NPBQ8NG41 125 aa13.44□□□□□ -0.26
SMARCA4-215ENST00000590574 MRAP2Q96G30 205 aa13.44□□□□□ -0.26
SMARCA4-215ENST00000590574 A0A087WWL8 130 aa13.43□□□□□ -0.26
SMARCA4-215ENST00000590574 SMAGPQ0VAQ4 97 aa13.43□□□□□ -0.26
SMARCA4-215ENST00000590574 LINC00322Q6ZN03 302 aaPredicted RBP13.43□□□□□ -0.26
SMARCA4-215ENST00000590574 OVOL3O00110 214 aa13.43□□□□□ -0.26
SMARCA4-215ENST00000590574 C19orf71A6NCJ1 209 aa13.43□□□□□ -0.26
SMARCA4-215ENST00000590574 LINC01587Q99440 93 aa13.43□□□□□ -0.26
SMARCA4-215ENST00000590574 TRAV2A0A0B4J234 112 aa13.43□□□□□ -0.26
SMARCA4-215ENST00000590574 DUSP14O95147 198 aaKnown RBP13.43□□□□□ -0.26
SMARCA4-215ENST00000590574 IGLV11-55A0A075B6I3 123 aa13.42□□□□□ -0.26
SMARCA4-215ENST00000590574 EMP1P54849 157 aa13.42□□□□□ -0.26
SMARCA4-215ENST00000590574 SCRT2Q9NQ03 307 aa13.42□□□□□ -0.26
SMARCA4-215ENST00000590574 DYSFO75923 2080 aa13.42□□□□□ -0.26
SMARCA4-215ENST00000590574 MSRB2Q9Y3D2 182 aa13.42□□□□□ -0.26
SMARCA4-215ENST00000590574 PLCE1Q9P212 2302 aa13.42□□□□□ -0.26
SMARCA4-215ENST00000590574 CFHR4Q92496 578 aa13.42□□□□□ -0.26
SMARCA4-215ENST00000590574 RRN3P1Q2M238 152 aa13.41□□□□□ -0.26
SMARCA4-215ENST00000590574 MEIG1Q5JSS6 88 aa13.41□□□□□ -0.26
SMARCA4-215ENST00000590574 LINC01545Q5VT33 79 aa13.41□□□□□ -0.26
SMARCA4-215ENST00000590574 SNCGO76070 127 aa13.41□□□□□ -0.26
SMARCA4-215ENST00000590574 SUMO2P61956 95 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-215ENST00000590574 A0A1B0GXF2 115 aa13.41□□□□□ -0.26
SMARCA4-215ENST00000590574 VCYO14598 125 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms