RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 PLAC8L1A1L4L8 177 aa7.98□□□□□ -1.13
SMAD4-211ENST00000590499 IFNA5P01569 189 aa7.98□□□□□ -1.13
SMAD4-211ENST00000590499 PRM2P04554 102 aa7.98□□□□□ -1.13
SMAD4-211ENST00000590499 GIPP09681 153 aaPredicted RBP7.98□□□□□ -1.13
SMAD4-211ENST00000590499 SPART-AS1P0CW21 52 aa7.98□□□□□ -1.13
SMAD4-211ENST00000590499 TSPOP30536 169 aa7.98□□□□□ -1.13
SMAD4-211ENST00000590499 CDKN1BP46527 198 aa7.98□□□□□ -1.13
SMAD4-211ENST00000590499 EMP1P54849 157 aa7.98□□□□□ -1.13
SMAD4-211ENST00000590499 RGS21Q2M5E4 152 aa7.98□□□□□ -1.13
SMAD4-211ENST00000590499 FFAR4Q5NUL3 377 aa7.98□□□□□ -1.13
SMAD4-211ENST00000590499 FAM222AQ5U5X8 452 aa7.98□□□□□ -1.13
SMAD4-211ENST00000590499 RPP25LQ8N5L8 163 aaKnown RBP7.98□□□□□ -1.13
SMAD4-211ENST00000590499 OR10J6PQ8NGY7 276 aa7.98□□□□□ -1.13
SMAD4-211ENST00000590499 ZNF503Q96F45 646 aa7.98□□□□□ -1.13
SMAD4-211ENST00000590499 AQP10Q96PS8 301 aa7.98□□□□□ -1.13
SMAD4-211ENST00000590499 ODF3Q96PU9 254 aa7.98□□□□□ -1.13
SMAD4-211ENST00000590499 TMEM208Q9BTX3 173 aa7.98□□□□□ -1.13
SMAD4-211ENST00000590499 APLNQ9ULZ1 77 aa7.98□□□□□ -1.13
SMAD4-211ENST00000590499 YTHDF2Q9Y5A9 579 aaKnown RBP7.98□□□□□ -1.13
SMAD4-211ENST00000590499 DEFB131BA0A096LNP1 70 aa7.97□□□□□ -1.13
SMAD4-211ENST00000590499 TEX48A0A1B0GUV7 120 aa7.97□□□□□ -1.13
SMAD4-211ENST00000590499 ZNF705GA8MUZ8 300 aaPredicted RBP7.97□□□□□ -1.13
SMAD4-211ENST00000590499 LY6G6CO95867 125 aa7.97□□□□□ -1.13
SMAD4-211ENST00000590499 CT45A10P0DMU9 189 aa7.97□□□□□ -1.13
SMAD4-211ENST00000590499 LGALS9CQ6DKI2 356 aa7.97□□□□□ -1.13
SMAD4-211ENST00000590499 TMEM256Q8N2U0 113 aa7.97□□□□□ -1.13
SMAD4-211ENST00000590499 EXOC3-AS1Q8N2X6 119 aa7.97□□□□□ -1.13
SMAD4-211ENST00000590499 SCGB1C1Q8TD33 95 aa7.97□□□□□ -1.13
SMAD4-211ENST00000590499 BLNKQ8WV28 456 aa7.97□□□□□ -1.13
SMAD4-211ENST00000590499 C20orf144Q9BQM9 153 aa7.97□□□□□ -1.13
SMAD4-211ENST00000590499 PAXXQ9BUH6 204 aa7.97□□□□□ -1.13
SMAD4-211ENST00000590499 OR51M1Q9H341 326 aa7.97□□□□□ -1.13
SMAD4-211ENST00000590499 PPP1R14DQ9NXH3 145 aa7.97□□□□□ -1.13
SMAD4-211ENST00000590499 PRELID1Q9Y255 219 aa7.97□□□□□ -1.13
SMAD4-211ENST00000590499 TIMM9Q9Y5J7 89 aa7.97□□□□□ -1.13
SMAD4-211ENST00000590499 DNAH2Q9P225 4427 aa7.96□□□□□ -1.13
SMAD4-211ENST00000590499 IGHV4-4A0A075B6R2 117 aa7.96□□□□□ -1.14
SMAD4-211ENST00000590499 C9orf118A6NHY6 69 aa7.96□□□□□ -1.14
SMAD4-211ENST00000590499 IGLL5B9A064 214 aa7.96□□□□□ -1.14
SMAD4-211ENST00000590499 G3V3Q6 166 aa7.96□□□□□ -1.14
SMAD4-211ENST00000590499 OR10J4P0C629 311 aa7.96□□□□□ -1.14
SMAD4-211ENST00000590499 NBEAP1P0C6P0 100 aa7.96□□□□□ -1.14
SMAD4-211ENST00000590499 AZU1P20160 251 aa7.96□□□□□ -1.14
SMAD4-211ENST00000590499 TAS2R60P59551 318 aa7.96□□□□□ -1.14
SMAD4-211ENST00000590499 GFI1BQ5VTD9 330 aa7.96□□□□□ -1.14
SMAD4-211ENST00000590499 PHYHIPLQ96FC7 376 aa7.96□□□□□ -1.14
SMAD4-211ENST00000590499 FAM19A4Q96LR4 140 aa7.96□□□□□ -1.14
SMAD4-211ENST00000590499 NIPSNAP3BQ9BS92 247 aa7.96□□□□□ -1.14
SMAD4-211ENST00000590499 RNF222A6NCQ9 220 aa7.95□□□□□ -1.14
SMAD4-211ENST00000590499 ERCC8Q13216 396 aa7.95□□□□□ -1.14
SMAD4-211ENST00000590499 ICAM4Q14773 271 aa7.95□□□□□ -1.14
SMAD4-211ENST00000590499 C9orf47Q6ZRZ4 202 aa7.95□□□□□ -1.14
SMAD4-211ENST00000590499 LINC01587Q99440 93 aa7.95□□□□□ -1.14
SMAD4-211ENST00000590499 hCG_2014768A0A024R1R8 64 aa7.94□□□□□ -1.14
SMAD4-211ENST00000590499 KLLNB2CW77 178 aa7.94□□□□□ -1.14
SMAD4-211ENST00000590499 H7BYZ3 331 aa7.94□□□□□ -1.14
SMAD4-211ENST00000590499 OR7C2O60412 319 aa7.94□□□□□ -1.14
SMAD4-211ENST00000590499 EIF3GO75821 320 aaKnown RBP eCLIP7.94□□□□□ -1.14
SMAD4-211ENST00000590499 M6PRP20645 277 aa7.94□□□□□ -1.14
SMAD4-211ENST00000590499 LEPP41159 167 aa7.94□□□□□ -1.14
SMAD4-211ENST00000590499 RAB2AP61019 212 aa7.94□□□□□ -1.14
SMAD4-211ENST00000590499 UBE2L3P68036 154 aaKnown RBP7.94□□□□□ -1.14
SMAD4-211ENST00000590499 ZNF266Q14584 549 aa7.94□□□□□ -1.14
SMAD4-211ENST00000590499 KHDC3LQ587J8 217 aa7.94□□□□□ -1.14
SMAD4-211ENST00000590499 OR2T35Q8NGX2 323 aa7.94□□□□□ -1.14
SMAD4-211ENST00000590499 OR2G3Q8NGZ4 309 aa7.94□□□□□ -1.14
SMAD4-211ENST00000590499 RNASE8Q8TDE3 154 aaKnown RBP7.94□□□□□ -1.14
SMAD4-211ENST00000590499 C8orf49Q96NF6 230 aa7.94□□□□□ -1.14
SMAD4-211ENST00000590499 AGPAT4-IT1Q9H0P7 198 aa7.94□□□□□ -1.14
SMAD4-211ENST00000590499 AAMDCQ9H7C9 122 aa7.94□□□□□ -1.14
SMAD4-211ENST00000590499 TNFSF18Q9UNG2 199 aa7.94□□□□□ -1.14
SMAD4-211ENST00000590499 IGKV2-40A0A087WW87 121 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-211ENST00000590499 LYRM9A8MSI8 78 aa7.93□□□□□ -1.14
SMAD4-211ENST00000590499 IGKV2D-40P01614 121 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-211ENST00000590499 CRISP2P16562 243 aa7.93□□□□□ -1.14
SMAD4-211ENST00000590499 TAS2R45P59539 299 aa7.93□□□□□ -1.14
SMAD4-211ENST00000590499 ACOT6Q3I5F7 207 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-211ENST00000590499 FAM122CQ6P4D5 195 aa7.93□□□□□ -1.14
SMAD4-211ENST00000590499 LYPD1Q8N2G4 141 aa7.93□□□□□ -1.14
SMAD4-211ENST00000590499 HSD17B11Q8NBQ5 300 aa7.93□□□□□ -1.14
SMAD4-211ENST00000590499 TMEM263Q8WUH6 116 aaKnown RBP7.93□□□□□ -1.14
SMAD4-211ENST00000590499 C16orf74Q96GX8 76 aa7.93□□□□□ -1.14
SMAD4-211ENST00000590499 LINC00477Q96M19 166 aa7.93□□□□□ -1.14
SMAD4-211ENST00000590499 VGLL1Q99990 258 aa7.93□□□□□ -1.14
SMAD4-211ENST00000590499 PSMG3Q9BT73 122 aaPredicted RBP7.93□□□□□ -1.14
SMAD4-211ENST00000590499 DNAH17Q9UFH2 4485 aa7.93□□□□□ -1.14
SMAD4-211ENST00000590499 FXYD6-FXYD2A0A087WZ82 144 aa7.92□□□□□ -1.14
SMAD4-211ENST00000590499 TRAV12-3A0A0B4J271 114 aa7.92□□□□□ -1.14
SMAD4-211ENST00000590499 ATP6V0CP27449 155 aa7.92□□□□□ -1.14
SMAD4-211ENST00000590499 DAD1P61803 113 aa7.92□□□□□ -1.14
SMAD4-211ENST00000590499 PQLC2Q6ZP29 291 aa7.92□□□□□ -1.14
SMAD4-211ENST00000590499 ZNF493Q6ZR52 646 aa7.92□□□□□ -1.14
SMAD4-211ENST00000590499 ZFAND2AQ8N6M9 145 aa7.92□□□□□ -1.14
SMAD4-211ENST00000590499 Q9H3A6 140 aa7.92□□□□□ -1.14
SMAD4-211ENST00000590499 ZNF492Q9P255 531 aa7.92□□□□□ -1.14
SMAD4-211ENST00000590499 TRBV7-9A0A0J9YWB2 115 aa7.91□□□□□ -1.14
SMAD4-211ENST00000590499 C7orf71A4D174 169 aa7.91□□□□□ -1.14
SMAD4-211ENST00000590499 J3KRW8 73 aa7.91□□□□□ -1.14
SMAD4-211ENST00000590499 ZNF324O75467 553 aaPredicted RBP7.91□□□□□ -1.14
SMAD4-211ENST00000590499 SLC25A5P05141 298 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms