RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 PTTG2Q9NZH5 202 aa11.72□□□□□ -0.53
CROCCP3-203ENST00000589964 TP53TG3Q9ULZ0 132 aa11.72□□□□□ -0.53
CROCCP3-203ENST00000589964 ZNF253O75346 499 aa11.71□□□□□ -0.53
CROCCP3-203ENST00000589964 GUK1Q16774 197 aa11.71□□□□□ -0.53
CROCCP3-203ENST00000589964 ATP6V1FQ16864 119 aa11.71□□□□□ -0.53
CROCCP3-203ENST00000589964 C15orf53Q8NAA6 179 aa11.71□□□□□ -0.53
CROCCP3-203ENST00000589964 PPP1R1CQ8WVI7 109 aa11.71□□□□□ -0.53
CROCCP3-203ENST00000589964 ODF3Q96PU9 254 aa11.71□□□□□ -0.53
CROCCP3-203ENST00000589964 MARVELD1Q9BSK0 173 aa11.71□□□□□ -0.53
CROCCP3-203ENST00000589964 SMIM3Q9BZL3 60 aa11.71□□□□□ -0.53
CROCCP3-203ENST00000589964 NMES1Q9C002 83 aa11.71□□□□□ -0.53
CROCCP3-203ENST00000589964 WDR61Q9GZS3 305 aaKnown RBP11.71□□□□□ -0.53
CROCCP3-203ENST00000589964 GSN-AS1Q9NRJ2 163 aa11.71□□□□□ -0.53
CROCCP3-203ENST00000589964 TRAV26-1A0A087WT03 109 aa11.7□□□□□ -0.54
CROCCP3-203ENST00000589964 C7orf71A4D174 169 aa11.7□□□□□ -0.54
CROCCP3-203ENST00000589964 KLLNB2CW77 178 aa11.7□□□□□ -0.54
CROCCP3-203ENST00000589964 E5RGE8 158 aa11.7□□□□□ -0.54
CROCCP3-203ENST00000589964 ZNF324O75467 553 aaPredicted RBP11.7□□□□□ -0.54
CROCCP3-203ENST00000589964 RNASE4P34096 147 aaKnown RBP11.7□□□□□ -0.54
CROCCP3-203ENST00000589964 LEPP41159 167 aa11.7□□□□□ -0.54
CROCCP3-203ENST00000589964 TNP2Q05952 138 aa11.7□□□□□ -0.54
CROCCP3-203ENST00000589964 ZNF493Q6ZR52 646 aa11.7□□□□□ -0.54
CROCCP3-203ENST00000589964 RNF24Q9Y225 148 aa11.7□□□□□ -0.54
CROCCP3-203ENST00000589964 KLF12Q9Y4X4 402 aa11.7□□□□□ -0.54
CROCCP3-203ENST00000589964 OR5I1Q13606 314 aa11.69□□□□□ -0.54
CROCCP3-203ENST00000589964 MRPL53Q96EL3 112 aaKnown RBP11.69□□□□□ -0.54
CROCCP3-203ENST00000589964 C20orf144Q9BQM9 153 aa11.69□□□□□ -0.54
CROCCP3-203ENST00000589964 TIMM9Q9Y5J7 89 aa11.69□□□□□ -0.54
CROCCP3-203ENST00000589964 ATG101Q9BSB4 218 aa11.68□□□□□ -0.54
CROCCP3-203ENST00000589964 RYR1P21817 5038 aa11.67□□□□□ -0.54
CROCCP3-203ENST00000589964 NBDYA0A0U1RRE5 68 aa11.67□□□□□ -0.54
CROCCP3-203ENST00000589964 MPDU1O75352 247 aa11.67□□□□□ -0.54
CROCCP3-203ENST00000589964 MPC2O95563 127 aa11.67□□□□□ -0.54
CROCCP3-203ENST00000589964 NBEAP1P0C6P0 100 aa11.67□□□□□ -0.54
CROCCP3-203ENST00000589964 C1orf134Q5TEV5 83 aa11.67□□□□□ -0.54
CROCCP3-203ENST00000589964 C9orf47Q6ZRZ4 202 aa11.67□□□□□ -0.54
CROCCP3-203ENST00000589964 SSX7Q7RTT5 188 aa11.67□□□□□ -0.54
CROCCP3-203ENST00000589964 VSIG2Q96IQ7 327 aa11.67□□□□□ -0.54
CROCCP3-203ENST00000589964 SLC25A31Q9H0C2 315 aa11.67□□□□□ -0.54
CROCCP3-203ENST00000589964 OR51M1Q9H341 326 aa11.67□□□□□ -0.54
CROCCP3-203ENST00000589964 MBD2Q9UBB5 411 aa11.67□□□□□ -0.54
CROCCP3-203ENST00000589964 HSPB11Q9Y547 144 aa11.67□□□□□ -0.54
CROCCP3-203ENST00000589964 PRAF2O60831 178 aa11.66□□□□□ -0.54
CROCCP3-203ENST00000589964 SLC25A5P05141 298 aaKnown RBP11.66□□□□□ -0.54
CROCCP3-203ENST00000589964 CRISP2P16562 243 aa11.66□□□□□ -0.54
CROCCP3-203ENST00000589964 PDE6HQ13956 83 aa11.66□□□□□ -0.54
CROCCP3-203ENST00000589964 FFAR4Q5NUL3 377 aa11.66□□□□□ -0.54
CROCCP3-203ENST00000589964 CCDC28AQ8IWP9 274 aa11.66□□□□□ -0.54
CROCCP3-203ENST00000589964 ATP5SQ99766 215 aa11.66□□□□□ -0.54
CROCCP3-203ENST00000589964 PYGO2Q9BRQ0 406 aa11.66□□□□□ -0.54
CROCCP3-203ENST00000589964 PAXXQ9BUH6 204 aa11.66□□□□□ -0.54
CROCCP3-203ENST00000589964 KRTAP4-5Q9BYR2 181 aa11.66□□□□□ -0.54
CROCCP3-203ENST00000589964 FUT9Q9Y231 359 aa11.66□□□□□ -0.54
CROCCP3-203ENST00000589964 MUC4Q99102 2169 aa11.66□□□□□ -0.54
CROCCP3-203ENST00000589964 RLN2P04090 185 aa11.65□□□□□ -0.54
CROCCP3-203ENST00000589964 M6PRP20645 277 aa11.65□□□□□ -0.54
CROCCP3-203ENST00000589964 DAZ2Q13117 558 aaKnown RBP11.65□□□□□ -0.54
CROCCP3-203ENST00000589964 ESRGQ1W209 222 aa11.65□□□□□ -0.54
CROCCP3-203ENST00000589964 RXFP4Q8TDU9 374 aa11.65□□□□□ -0.54
CROCCP3-203ENST00000589964 GNPNAT1Q96EK6 184 aaPredicted RBP11.65□□□□□ -0.54
CROCCP3-203ENST00000589964 MRPL16Q9NX20 251 aaKnown RBP11.65□□□□□ -0.54
CROCCP3-203ENST00000589964 PRELID1Q9Y255 219 aa11.65□□□□□ -0.54
CROCCP3-203ENST00000589964 SNURFLB1AK76 121 aa11.64□□□□□ -0.55
CROCCP3-203ENST00000589964 SSNA1O43805 119 aa11.64□□□□□ -0.55
CROCCP3-203ENST00000589964 IGHV3-53P01767 116 aa11.64□□□□□ -0.55
CROCCP3-203ENST00000589964 LINC00477Q96M19 166 aa11.64□□□□□ -0.55
CROCCP3-203ENST00000589964 ZNF492Q9P255 531 aa11.64□□□□□ -0.55
CROCCP3-203ENST00000589964 TRGV1A0A0A0MS02 117 aa11.63□□□□□ -0.55
CROCCP3-203ENST00000589964 OR7C2O60412 319 aa11.63□□□□□ -0.55
CROCCP3-203ENST00000589964 RANP62826 216 aaKnown RBP11.63□□□□□ -0.55
CROCCP3-203ENST00000589964 Q9H3A6 140 aa11.63□□□□□ -0.55
CROCCP3-203ENST00000589964 ABCA13Q86UQ4 5058 aa11.63□□□□□ -0.55
CROCCP3-203ENST00000589964 A0A096LPF7 62 aa11.62□□□□□ -0.55
CROCCP3-203ENST00000589964 HMGB3O15347 200 aaKnown RBP11.62□□□□□ -0.55
CROCCP3-203ENST00000589964 RPL12P30050 165 aaKnown RBP11.62□□□□□ -0.55
CROCCP3-203ENST00000589964 TCL1AP56279 114 aa11.62□□□□□ -0.55
CROCCP3-203ENST00000589964 FAM3BP58499 235 aaPredicted RBP11.62□□□□□ -0.55
CROCCP3-203ENST00000589964 RAB2AP61019 212 aa11.62□□□□□ -0.55
CROCCP3-203ENST00000589964 UBE2L3P68036 154 aaKnown RBP11.62□□□□□ -0.55
CROCCP3-203ENST00000589964 MUC21Q5SSG8 566 aa11.62□□□□□ -0.55
CROCCP3-203ENST00000589964 EIF4E3Q8N5X7 224 aaKnown RBP11.62□□□□□ -0.55
CROCCP3-203ENST00000589964 LINC00467Q9BRT7 94 aa11.62□□□□□ -0.55
CROCCP3-203ENST00000589964 MRPL32Q9BYC8 188 aaKnown RBP11.62□□□□□ -0.55
CROCCP3-203ENST00000589964 AAMDCQ9H7C9 122 aa11.62□□□□□ -0.55
CROCCP3-203ENST00000589964 ALG5Q9Y673 324 aa11.62□□□□□ -0.55
CROCCP3-203ENST00000589964 HSPG2P98160 4391 aa11.61□□□□□ -0.55
CROCCP3-203ENST00000589964 SPINK4O60575 86 aa11.61□□□□□ -0.55
CROCCP3-203ENST00000589964 GPX1P07203 203 aa11.61□□□□□ -0.55
CROCCP3-203ENST00000589964 ZNF138P52744 262 aa11.61□□□□□ -0.55
CROCCP3-203ENST00000589964 ANXA2RQ3ZCQ2 193 aa11.61□□□□□ -0.55
CROCCP3-203ENST00000589964 Q5BKY6 102 aa11.61□□□□□ -0.55
CROCCP3-203ENST00000589964 C6orf223Q8N319 242 aa11.61□□□□□ -0.55
CROCCP3-203ENST00000589964 MDFICQ9P1T7 246 aa11.61□□□□□ -0.55
CROCCP3-203ENST00000589964 CCL18P55774 89 aa11.6□□□□□ -0.55
CROCCP3-203ENST00000589964 CYCSP99999 105 aaKnown RBP11.6□□□□□ -0.55
CROCCP3-203ENST00000589964 TMEM78Q5T7P6 136 aa11.6□□□□□ -0.55
CROCCP3-203ENST00000589964 TVP23CQ96ET8 276 aa11.6□□□□□ -0.55
CROCCP3-203ENST00000589964 TRGV2A0A075B6R0 118 aa11.59□□□□□ -0.55
CROCCP3-203ENST00000589964 IGHV1OR15-1A0A075B7D0 117 aa11.59□□□□□ -0.55
CROCCP3-203ENST00000589964 GNG5P63218 68 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 512.7 ms