RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 TMEM183AQ8IXX5 376 aa13.06□□□□□ -0.32
CXXC1-212ENST00000589940 A0A087WWC5 75 aa13.05□□□□□ -0.32
CXXC1-212ENST00000589940 GCGP01275 180 aa13.05□□□□□ -0.32
CXXC1-212ENST00000589940 ERCC8Q13216 396 aa13.05□□□□□ -0.32
CXXC1-212ENST00000589940 C9orf47Q6ZRZ4 202 aa13.05□□□□□ -0.32
CXXC1-212ENST00000589940 C3orf56Q8N813 242 aa13.05□□□□□ -0.32
CXXC1-212ENST00000589940 COL6A5A8TX70 2615 aa13.05□□□□□ -0.32
CXXC1-212ENST00000589940 IGLV1-51P01701 117 aa13.05□□□□□ -0.32
CXXC1-212ENST00000589940 MT-ND4LP03901 98 aa13.05□□□□□ -0.32
CXXC1-212ENST00000589940 OR5I1Q13606 314 aa13.05□□□□□ -0.32
CXXC1-212ENST00000589940 RNF212Q495C1 297 aa13.05□□□□□ -0.32
CXXC1-212ENST00000589940 TMEM78Q5T7P6 136 aa13.05□□□□□ -0.32
CXXC1-212ENST00000589940 OR10J6PQ8NGY7 276 aa13.05□□□□□ -0.32
CXXC1-212ENST00000589940 SFRP2Q96HF1 295 aa13.05□□□□□ -0.32
CXXC1-212ENST00000589940 AGPAT4-IT1Q9H0P7 198 aa13.05□□□□□ -0.32
CXXC1-212ENST00000589940 STAB1Q9NY15 2570 aa13.05□□□□□ -0.32
CXXC1-212ENST00000589940 TRRAPQ9Y4A5 3859 aa13.04□□□□□ -0.32
CXXC1-212ENST00000589940 IZUMO1RA6ND01 250 aa13.04□□□□□ -0.32
CXXC1-212ENST00000589940 OR4C46A6NHA9 309 aa13.04□□□□□ -0.32
CXXC1-212ENST00000589940 C12orf54Q6X4T0 127 aa13.04□□□□□ -0.32
CXXC1-212ENST00000589940 OR8A1Q8NGG7 326 aa13.04□□□□□ -0.32
CXXC1-212ENST00000589940 Q8TAT8 98 aa13.04□□□□□ -0.32
CXXC1-212ENST00000589940 DEFB1P60022 68 aa13.04□□□□□ -0.32
CXXC1-212ENST00000589940 SAPCD1Q5SSQ6 148 aa13.04□□□□□ -0.32
CXXC1-212ENST00000589940 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.04□□□□□ -0.32
CXXC1-212ENST00000589940 OR2K2Q8NGT1 345 aa13.04□□□□□ -0.32
CXXC1-212ENST00000589940 PRR25Q96S07 402 aa13.04□□□□□ -0.32
CXXC1-212ENST00000589940 ASCL2Q99929 193 aa13.04□□□□□ -0.32
CXXC1-212ENST00000589940 ZNF705DP0CH99 300 aaPredicted RBP13.03□□□□□ -0.32
CXXC1-212ENST00000589940 ZNF705BP0CI00 300 aaPredicted RBP13.03□□□□□ -0.32
CXXC1-212ENST00000589940 CTDSP1Q9GZU7 261 aa13.03□□□□□ -0.32
CXXC1-212ENST00000589940 ZNF256Q9Y2P7 627 aaPredicted RBP13.03□□□□□ -0.32
CXXC1-212ENST00000589940 NPIPB6E9PJ23 425 aa13.03□□□□□ -0.32
CXXC1-212ENST00000589940 F6UB75 175 aa13.03□□□□□ -0.32
CXXC1-212ENST00000589940 ZNF138P52744 262 aa13.03□□□□□ -0.32
CXXC1-212ENST00000589940 SHISA2Q6UWI4 295 aa13.03□□□□□ -0.32
CXXC1-212ENST00000589940 ANAPC16Q96DE5 110 aa13.03□□□□□ -0.32
CXXC1-212ENST00000589940 BIN3Q9NQY0 253 aa13.03□□□□□ -0.32
CXXC1-212ENST00000589940 PPP1R14DQ9NXH3 145 aa13.03□□□□□ -0.32
CXXC1-212ENST00000589940 ERVFC1-1P60608 527 aa13.02□□□□□ -0.33
CXXC1-212ENST00000589940 HIST1H1AQ02539 215 aaPredicted RBP13.02□□□□□ -0.33
CXXC1-212ENST00000589940 TMEM88Q6PEY1 159 aa13.02□□□□□ -0.33
CXXC1-212ENST00000589940 LINC00477Q96M19 166 aa13.02□□□□□ -0.33
CXXC1-212ENST00000589940 NDFIP1Q9BT67 221 aa13.02□□□□□ -0.33
CXXC1-212ENST00000589940 GPR61Q9BZJ8 451 aa13.02□□□□□ -0.33
CXXC1-212ENST00000589940 TMEM242Q9NWH2 141 aa13.02□□□□□ -0.33
CXXC1-212ENST00000589940 ZNF492Q9P255 531 aa13.02□□□□□ -0.33
CXXC1-212ENST00000589940 BTN1A1Q13410 526 aa13.01□□□□□ -0.33
CXXC1-212ENST00000589940 PRR27Q6MZM9 219 aa13.01□□□□□ -0.33
CXXC1-212ENST00000589940 COX8CQ7Z4L0 72 aa13.01□□□□□ -0.33
CXXC1-212ENST00000589940 CBLN2Q8IUK8 224 aa13.01□□□□□ -0.33
CXXC1-212ENST00000589940 ZC2HC1AQ96GY0 325 aa13.01□□□□□ -0.33
CXXC1-212ENST00000589940 PPP1R2P9O14990 202 aa13.01□□□□□ -0.33
CXXC1-212ENST00000589940 OR10G8Q8NGN5 311 aa13.01□□□□□ -0.33
CXXC1-212ENST00000589940 C8orf49Q96NF6 230 aa13.01□□□□□ -0.33
CXXC1-212ENST00000589940 RNASE7Q9H1E1 156 aaKnown RBP13.01□□□□□ -0.33
CXXC1-212ENST00000589940 SMCO4Q9NRQ5 59 aa13.01□□□□□ -0.33
CXXC1-212ENST00000589940 H7BYZ3 331 aa13□□□□□ -0.33
CXXC1-212ENST00000589940 IBA57Q5T440 356 aaKnown RBP13□□□□□ -0.33
CXXC1-212ENST00000589940 C15orf54Q8N8G6 183 aa13□□□□□ -0.33
CXXC1-212ENST00000589940 OSTCQ9NRP0 149 aa13□□□□□ -0.33
CXXC1-212ENST00000589940 SORL1Q92673 2214 aa13□□□□□ -0.33
CXXC1-212ENST00000589940 A0A0J9YX75 114 aa13□□□□□ -0.33
CXXC1-212ENST00000589940 INSL3P51460 131 aa13□□□□□ -0.33
CXXC1-212ENST00000589940 DEFB131AP59861 70 aa13□□□□□ -0.33
CXXC1-212ENST00000589940 CTAG1AP78358 180 aa13□□□□□ -0.33
CXXC1-212ENST00000589940 FAM231DQ6ZW35 169 aa13□□□□□ -0.33
CXXC1-212ENST00000589940 SPATA3Q8NHX4 192 aa13□□□□□ -0.33
CXXC1-212ENST00000589940 LENEPQ9Y5L5 61 aa13□□□□□ -0.33
CXXC1-212ENST00000589940 CT45A10P0DMU9 189 aa12.99□□□□□ -0.33
CXXC1-212ENST00000589940 GDF5OSQ5U4N7 250 aa12.99□□□□□ -0.33
CXXC1-212ENST00000589940 EBLN2Q6P2I7 272 aa12.99□□□□□ -0.33
CXXC1-212ENST00000589940 FOXI2Q6ZQN5 318 aa12.99□□□□□ -0.33
CXXC1-212ENST00000589940 SAV1Q9H4B6 383 aaPredicted RBP12.99□□□□□ -0.33
CXXC1-212ENST00000589940 MAP6D1Q9H9H5 199 aa12.99□□□□□ -0.33
CXXC1-212ENST00000589940 CXorf65A6NEN9 183 aa12.98□□□□□ -0.33
CXXC1-212ENST00000589940 C9orf66Q5T8R8 295 aa12.98□□□□□ -0.33
CXXC1-212ENST00000589940 LINC00322Q6ZN03 302 aaPredicted RBP12.98□□□□□ -0.33
CXXC1-212ENST00000589940 WFDC9Q8NEX5 89 aa12.98□□□□□ -0.33
CXXC1-212ENST00000589940 ANK2Q01484 3957 aa12.98□□□□□ -0.33
CXXC1-212ENST00000589940 CD33P20138 364 aa12.98□□□□□ -0.33
CXXC1-212ENST00000589940 C19orf71A6NCJ1 209 aa12.97□□□□□ -0.33
CXXC1-212ENST00000589940 NUDT10Q8NFP7 164 aa12.97□□□□□ -0.33
CXXC1-212ENST00000589940 NUDT11Q96G61 164 aa12.97□□□□□ -0.33
CXXC1-212ENST00000589940 MCRIP2Q9BUT9 160 aaKnown RBP12.97□□□□□ -0.33
CXXC1-212ENST00000589940 TUBA4BQ9H853 241 aa12.97□□□□□ -0.33
CXXC1-212ENST00000589940 V9GYV3 84 aa12.97□□□□□ -0.33
CXXC1-212ENST00000589940 TRBV7-9A0A0J9YWB2 115 aa12.97□□□□□ -0.33
CXXC1-212ENST00000589940 CRIP1P50238 77 aa12.97□□□□□ -0.33
CXXC1-212ENST00000589940 ODF3L2Q3SX64 289 aa12.97□□□□□ -0.33
CXXC1-212ENST00000589940 DAZAP1Q96EP5 407 aaKnown RBP12.97□□□□□ -0.33
CXXC1-212ENST00000589940 FAM19A4Q96LR4 140 aa12.96□□□□□ -0.33
CXXC1-212ENST00000589940 NOTCH3Q9UM47 2321 aa12.96□□□□□ -0.33
CXXC1-212ENST00000589940 DUSP14O95147 198 aaKnown RBP12.96□□□□□ -0.34
CXXC1-212ENST00000589940 P01737 135 aa12.96□□□□□ -0.34
CXXC1-212ENST00000589940 FAM162BQ5T6X4 162 aa12.96□□□□□ -0.34
CXXC1-212ENST00000589940 ZNF705GA8MUZ8 300 aaPredicted RBP12.95□□□□□ -0.34
CXXC1-212ENST00000589940 ZNF80P51504 273 aaPredicted RBP12.95□□□□□ -0.34
CXXC1-212ENST00000589940 BEAN1Q3B7T3 259 aa12.95□□□□□ -0.34
CXXC1-212ENST00000589940 GATCO43716 136 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms