RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 LINC01548A6NM66 108 aa8.62□□□□□ -1.03
GFAP-216ENST00000589701 NUP35Q8NFH5 326 aa8.62□□□□□ -1.03
GFAP-216ENST00000589701 TRGV9Q99603 122 aa8.62□□□□□ -1.03
GFAP-216ENST00000589701 LINC00527Q9UJ94 153 aa8.62□□□□□ -1.03
GFAP-216ENST00000589701 HIGD1AQ9Y241 93 aa8.62□□□□□ -1.03
GFAP-216ENST00000589701 SOX21Q9Y651 276 aaPredicted RBP8.62□□□□□ -1.03
GFAP-216ENST00000589701 SETXQ7Z333 2677 aaKnown RBP8.61□□□□□ -1.03
GFAP-216ENST00000589701 BMPR1BO00238 502 aa8.61□□□□□ -1.03
GFAP-216ENST00000589701 SCGB2A1O75556 95 aa8.61□□□□□ -1.03
GFAP-216ENST00000589701 OR2J3O76001 311 aa8.61□□□□□ -1.03
GFAP-216ENST00000589701 FCGR2BP31994 310 aaPredicted RBP8.61□□□□□ -1.03
GFAP-216ENST00000589701 MYCNOSP40205 109 aa8.61□□□□□ -1.03
GFAP-216ENST00000589701 HIST1H1AQ02539 215 aaPredicted RBP8.61□□□□□ -1.03
GFAP-216ENST00000589701 PRNTQ86SH4 94 aa8.61□□□□□ -1.03
GFAP-216ENST00000589701 C8orf46Q8TAG6 207 aa8.61□□□□□ -1.03
GFAP-216ENST00000589701 RAX2Q96IS3 184 aa8.61□□□□□ -1.03
GFAP-216ENST00000589701 SONP18583 2426 aaKnown RBP8.61□□□□□ -1.03
GFAP-216ENST00000589701 OSTCQ9NRP0 149 aa8.61□□□□□ -1.03
GFAP-216ENST00000589701 IGHV3-66A0A0C4DH42 116 aa8.6□□□□□ -1.03
GFAP-216ENST00000589701 PRTN3P24158 256 aa8.6□□□□□ -1.03
GFAP-216ENST00000589701 FOXA3P55318 350 aaPredicted RBP8.6□□□□□ -1.03
GFAP-216ENST00000589701 OR11H6Q8NGC7 330 aa8.6□□□□□ -1.03
GFAP-216ENST00000589701 CITED2Q99967 270 aaPredicted RBP8.6□□□□□ -1.03
GFAP-216ENST00000589701 CSDC2Q9Y534 153 aaKnown RBP8.6□□□□□ -1.03
GFAP-216ENST00000589701 SMIM27A0A1W2PRY6 76 aa8.6□□□□□ -1.03
GFAP-216ENST00000589701 HOXB4P17483 251 aaPredicted RBP8.6□□□□□ -1.03
GFAP-216ENST00000589701 NTF3P20783 257 aa8.6□□□□□ -1.03
GFAP-216ENST00000589701 PMCHL1Q16048 86 aa8.6□□□□□ -1.03
GFAP-216ENST00000589701 ANXA2RQ3ZCQ2 193 aa8.6□□□□□ -1.03
GFAP-216ENST00000589701 PGLYRP4Q96LB8 373 aa8.6□□□□□ -1.03
GFAP-216ENST00000589701 C1QTNF4Q9BXJ3 329 aa8.6□□□□□ -1.03
GFAP-216ENST00000589701 CCDC168Q8NDH2 2452 aa8.6□□□□□ -1.03
GFAP-216ENST00000589701 IGHV3-49A0A0A0MS15 119 aa8.59□□□□□ -1.03
GFAP-216ENST00000589701 TCRAP04437 139 aa8.59□□□□□ -1.03
GFAP-216ENST00000589701 AMY1AP04745 511 aa8.59□□□□□ -1.03
GFAP-216ENST00000589701 ECSCRQ19T08 205 aa8.59□□□□□ -1.03
GFAP-216ENST00000589701 TMEM219Q86XT9 240 aa8.59□□□□□ -1.03
GFAP-216ENST00000589701 GTSF1Q8WW33 167 aa8.59□□□□□ -1.03
GFAP-216ENST00000589701 FANCD2OSQ96PS1 177 aa8.59□□□□□ -1.03
GFAP-216ENST00000589701 TPPP3Q9BW30 176 aa8.59□□□□□ -1.03
GFAP-216ENST00000589701 LY96Q9Y6Y9 160 aa8.59□□□□□ -1.03
GFAP-216ENST00000589701 ZNF469Q96JG9 3925 aaPredicted RBP8.59□□□□□ -1.03
GFAP-216ENST00000589701 H3BUT2 72 aa8.59□□□□□ -1.03
GFAP-216ENST00000589701 FOXE3Q13461 319 aa8.59□□□□□ -1.03
GFAP-216ENST00000589701 Q56UQ5 140 aa8.59□□□□□ -1.03
GFAP-216ENST00000589701 NRGNQ92686 78 aa8.59□□□□□ -1.03
GFAP-216ENST00000589701 C7orf69Q9H7B7 122 aa8.59□□□□□ -1.03
GFAP-216ENST00000589701 SORL1Q92673 2214 aa8.59□□□□□ -1.03
GFAP-216ENST00000589701 TRAV9-2A0A087WT02 112 aa8.58□□□□□ -1.04
GFAP-216ENST00000589701 A0A087WX48 190 aa8.58□□□□□ -1.04
GFAP-216ENST00000589701 ODF3BA8MYP8 253 aa8.58□□□□□ -1.04
GFAP-216ENST00000589701 ZNF491Q8N8L2 437 aa8.58□□□□□ -1.04
GFAP-216ENST00000589701 OR2K2Q8NGT1 345 aa8.58□□□□□ -1.04
GFAP-216ENST00000589701 TMUB1Q9BVT8 246 aa8.58□□□□□ -1.04
GFAP-216ENST00000589701 ARL2-SNX15V9GYD0 113 aa8.58□□□□□ -1.04
GFAP-216ENST00000589701 G3V318 75 aa8.58□□□□□ -1.04
GFAP-216ENST00000589701 HLA-DMBP28068 263 aa8.58□□□□□ -1.04
GFAP-216ENST00000589701 BRD3OSQ6XYD6 125 aa8.58□□□□□ -1.04
GFAP-216ENST00000589701 SPATA12Q7Z6I5 190 aa8.58□□□□□ -1.04
GFAP-216ENST00000589701 ARPC1AQ92747 370 aa8.58□□□□□ -1.04
GFAP-216ENST00000589701 RNF125Q96EQ8 232 aa8.58□□□□□ -1.04
GFAP-216ENST00000589701 ANAPC13Q9BS18 74 aa8.58□□□□□ -1.04
GFAP-216ENST00000589701 GNB1LQ9BYB4 327 aa8.58□□□□□ -1.04
GFAP-216ENST00000589701 NBPF19A0A087WUL8 3843 aa8.58□□□□□ -1.04
GFAP-216ENST00000589701 NIPBLQ6KC79 2804 aaeCLIP8.58□□□□□ -1.04
GFAP-216ENST00000589701 NAV2Q8IVL1 2488 aa8.58□□□□□ -1.04
GFAP-216ENST00000589701 A0A087X0K7 114 aa8.57□□□□□ -1.04
GFAP-216ENST00000589701 TMSB15BA0A087X1C1 80 aa8.57□□□□□ -1.04
GFAP-216ENST00000589701 TMEM189A5PLL7 270 aa8.57□□□□□ -1.04
GFAP-216ENST00000589701 F8W735 103 aaPredicted RBP8.57□□□□□ -1.04
GFAP-216ENST00000589701 APCSP02743 223 aa8.57□□□□□ -1.04
GFAP-216ENST00000589701 SAA4P35542 130 aa8.57□□□□□ -1.04
GFAP-216ENST00000589701 PVRIGQ6DKI7 326 aa8.57□□□□□ -1.04
GFAP-216ENST00000589701 PIP4P2Q8N4L2 257 aa8.57□□□□□ -1.04
GFAP-216ENST00000589701 ITLN2Q8WWU7 325 aaPredicted RBP8.57□□□□□ -1.04
GFAP-216ENST00000589701 ZNF331Q9NQX6 463 aaPredicted RBP8.57□□□□□ -1.04
GFAP-216ENST00000589701 TIMM8BQ9Y5J9 83 aaPredicted RBP8.57□□□□□ -1.04
GFAP-216ENST00000589701 ZNF785A8K8V0 405 aa8.57□□□□□ -1.04
GFAP-216ENST00000589701 ZNF138P52744 262 aa8.57□□□□□ -1.04
GFAP-216ENST00000589701 FOXI2Q6ZQN5 318 aa8.57□□□□□ -1.04
GFAP-216ENST00000589701 PTH2Q96A98 100 aa8.57□□□□□ -1.04
GFAP-216ENST00000589701 MBD6Q96DN6 1003 aa8.57□□□□□ -1.04
GFAP-216ENST00000589701 A0A1W2PS18 150 aa8.57□□□□□ -1.04
GFAP-216ENST00000589701 IZUMO1RA6ND01 250 aa8.57□□□□□ -1.04
GFAP-216ENST00000589701 IGLV2-11P01706 119 aa8.57□□□□□ -1.04
GFAP-216ENST00000589701 C12orf54Q6X4T0 127 aa8.57□□□□□ -1.04
GFAP-216ENST00000589701 SPAG8Q99932 426 aaPredicted RBP8.57□□□□□ -1.04
GFAP-216ENST00000589701 SPINK8P0C7L1 97 aa8.56□□□□□ -1.04
GFAP-216ENST00000589701 EGR2P11161 476 aaPredicted RBP8.56□□□□□ -1.04
GFAP-216ENST00000589701 PET117Q6UWS5 81 aa8.56□□□□□ -1.04
GFAP-216ENST00000589701 C8orf49Q96NF6 230 aa8.56□□□□□ -1.04
GFAP-216ENST00000589701 IGHV7-81A0A0B4J1V7 117 aa8.56□□□□□ -1.04
GFAP-216ENST00000589701 WIPF1O43516 503 aa8.56□□□□□ -1.04
GFAP-216ENST00000589701 MT-ATP8P03928 68 aa8.56□□□□□ -1.04
GFAP-216ENST00000589701 C8orf86Q6ZUL3 223 aa8.56□□□□□ -1.04
GFAP-216ENST00000589701 DTX2Q86UW9 622 aa8.56□□□□□ -1.04
GFAP-216ENST00000589701 Q8TAT8 98 aa8.56□□□□□ -1.04
GFAP-216ENST00000589701 PIMREGQ9BSJ6 248 aa8.56□□□□□ -1.04
GFAP-216ENST00000589701 MLST8Q9BVC4 326 aa8.56□□□□□ -1.04
GFAP-216ENST00000589701 IGKV2-40A0A087WW87 121 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms