RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 GATAD1Q8WUU5 269 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 FAM218AQ96MZ4 157 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 NMES1Q9C002 83 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 NDUFA4L2Q9NRX3 87 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 TNFSF18Q9UNG2 199 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 ANK3Q12955 4377 aaKnown RBP2.48□□□□□ -2.01
ZNF540-207ENST00000589285 PSMB11A5LHX3 300 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 CCL25O15444 150 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 LINC00869P0C866 280 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 ZNF705DP0CH99 300 aaPredicted RBP2.48□□□□□ -2.01
ZNF540-207ENST00000589285 ZNF705BP0CI00 300 aaPredicted RBP2.48□□□□□ -2.01
ZNF540-207ENST00000589285 PYYP10082 97 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 FCGR2BP31994 310 aaPredicted RBP2.48□□□□□ -2.01
ZNF540-207ENST00000589285 ZNF137PP52743 207 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 HILS1P60008 231 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 ZNF345Q14585 488 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 OCIAD2Q56VL3 154 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 UNQ9165/PRO28630Q6UXU0 137 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 OR11H1Q8NG94 326 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 OR4C5Q8NGB2 326 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 LINC01006Q8NI28 216 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 SLC35E1Q96K37 410 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 LYRM2Q9NU23 88 aaPredicted RBP2.48□□□□□ -2.01
ZNF540-207ENST00000589285 UQCC1Q9NVA1 299 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 BET1LQ9NYM9 111 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 TENM3Q9P273 2699 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 TENM2Q9NT68 2774 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 A6NDX4 124 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 RBFOX2O43251 390 aaKnown RBP eCLIP2.47□□□□□ -2.01
ZNF540-207ENST00000589285 PITX3O75364 302 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 SCGB1A1P11684 91 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 HTN1P15515 57 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 RAB5AP20339 215 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 KIR2DS2P43631 304 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 SULT1A1P50225 295 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 HBG1P69891 147 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 HBG2P69892 147 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 TMEM30BQ3MIR4 351 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 C5orf47Q569G3 176 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 IL34Q6ZMJ4 242 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 KCNRGQ8N5I3 272 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 OR51G1Q8NGK1 321 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 OR5B3Q8NH48 314 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 OR4X1Q8NH49 305 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 RPUSD4Q96CM3 377 aaKnown RBP2.47□□□□□ -2.01
ZNF540-207ENST00000589285 RAB40CQ96S21 281 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 C21orf62Q9NYP8 219 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 TSSC4Q9Y5U2 329 aaPredicted RBP2.47□□□□□ -2.01
ZNF540-207ENST00000589285 A0A0D9SG52 128 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 TCRBV4S1A1TA0A5B7 111 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 J3QLI3 93 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 BCL2L11O43521 198 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 CKS1BP61024 79 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 GAGE5Q13069 117 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 GAGE6Q13070 117 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 IL15RAQ13261 267 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 PSG3Q16557 428 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 COL5A1-AS1Q5SY13 56 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 CST9LP1Q5W188 147 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 Q6ZRG5 221 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 MRPL52Q86TS9 123 aaKnown RBP2.47□□□□□ -2.01
ZNF540-207ENST00000589285 MTURNQ8N3F0 131 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 OR4X2Q8NGF9 303 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 SFRP2Q96HF1 295 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 YPEL4Q96NS1 127 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 SLC25A31Q9H0C2 315 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 RPRMQ9NS64 109 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 RABAC1Q9UI14 185 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 PXMP4Q9Y6I8 212 aa2.47□□□□□ -2.01
ZNF540-207ENST00000589285 A0A087WW49 117 aa2.46□□□□□ -2.01
ZNF540-207ENST00000589285 LOC102724200A0A096LPH7 203 aaPredicted RBP2.46□□□□□ -2.01
ZNF540-207ENST00000589285 PDE6DO43924 150 aa2.46□□□□□ -2.01
ZNF540-207ENST00000589285 P0C879 139 aa2.46□□□□□ -2.01
ZNF540-207ENST00000589285 HLA-DMBP28068 263 aa2.46□□□□□ -2.01
ZNF540-207ENST00000589285 SUB1P53999 127 aaKnown RBP eCLIP2.46□□□□□ -2.01
ZNF540-207ENST00000589285 RANP62826 216 aaKnown RBP2.46□□□□□ -2.01
ZNF540-207ENST00000589285 CCL20P78556 96 aa2.46□□□□□ -2.01
ZNF540-207ENST00000589285 RPEL1Q2QD12 228 aa2.46□□□□□ -2.01
ZNF540-207ENST00000589285 TCTEX1D4Q5JR98 221 aa2.46□□□□□ -2.01
ZNF540-207ENST00000589285 PRR27Q6MZM9 219 aa2.46□□□□□ -2.01
ZNF540-207ENST00000589285 MIR17HGQ75NE6 70 aa2.46□□□□□ -2.01
ZNF540-207ENST00000589285 ZNF664Q8N3J9 261 aa2.46□□□□□ -2.01
ZNF540-207ENST00000589285 C3orf56Q8N813 242 aa2.46□□□□□ -2.01
ZNF540-207ENST00000589285 SGMS2Q8NHU3 365 aa2.46□□□□□ -2.01
ZNF540-207ENST00000589285 PHLDA1Q8WV24 401 aaPredicted RBP2.46□□□□□ -2.01
ZNF540-207ENST00000589285 MGST2Q99735 147 aa2.46□□□□□ -2.01
ZNF540-207ENST00000589285 SCRT1Q9BWW7 348 aa2.46□□□□□ -2.01
ZNF540-207ENST00000589285 EIF5A2Q9GZV4 153 aaKnown RBP2.46□□□□□ -2.01
ZNF540-207ENST00000589285 ZNF702PQ9H963 129 aa2.46□□□□□ -2.01
ZNF540-207ENST00000589285 GNG13Q9P2W3 67 aa2.46□□□□□ -2.01
ZNF540-207ENST00000589285 F11RQ9Y624 299 aaKnown RBP2.46□□□□□ -2.01
ZNF540-207ENST00000589285 FBN3Q75N90 2809 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 BORCS7-ASMTA0A0B4J1R7 106 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 K7EIM0 57 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 DFFBO76075 338 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 NDUFA3O95167 84 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 HLA-DRB1P01911 266 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 ATP5G2Q06055 141 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 BATFQ16520 125 aa2.46□□□□□ -2.02
ZNF540-207ENST00000589285 ZNF429Q86V71 674 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms