RNA–Protein interactions for RNA: ENST00000589162.1

CAPNS1-208, Transcript of calpain small subunit 1, humanhuman

TSL 3

Gene CAPNS1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-208ENST00000589162 OR11H12B2RN74 326 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 DIRC3C9JPN6 131 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 F6UZH7 168 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 PEX7O00628 323 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 ISLRO14498 428 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 IFNA1P01562 189 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 IGLV2-11P01706 119 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 TCRAP04437 139 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 S100A7P31151 101 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 AKR1C3P42330 323 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 CNN1P51911 297 aaKnown RBP4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 PAFAH1B2P68402 229 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 PSG9Q00887 426 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 MEF2BQ02080 365 aaPredicted RBP4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 KRTAP21-3Q3LHN1 58 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 PRR9Q5T870 116 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 PRNTQ86SH4 94 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 C5orf17Q8NAS9 161 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 OR4B1Q8NGF8 309 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 OR8A1Q8NGG7 326 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 OR2K2Q8NGT1 345 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 CMTM2Q8TAZ6 248 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 TVP23CQ96ET8 276 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 AGPAT4-IT1Q9H0P7 198 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 SLC35B3Q9H1N7 401 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 MED9Q9NWA0 146 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 TENM1Q9UKZ4 2725 aa4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 NIPBLQ6KC79 2804 aaeCLIP4.45□□□□□ -1.7
CAPNS1-208ENST00000589162 AGRNO00468 2067 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 TRAV12-2A0A075B6T6 113 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 A0A0J9YX75 114 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 M0R2Z0 102 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 ZNF253O75346 499 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 CD5P06127 495 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 SFTA3P0C7M3 94 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 CT45A10P0DMU9 189 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 ADCYAP1P18509 176 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 MEOX2P50222 304 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 INSL3P51460 131 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 PDE6HQ13956 83 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 SPINK13Q1W4C9 94 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 Q86TA4 180 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 C2CD4CQ8TF44 421 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 PARLQ9H300 379 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 SRD5A3Q9H8P0 318 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 CLEC5AQ9NY25 188 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 PSG8Q9UQ74 426 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 RNF24Q9Y225 148 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 NOTCH3Q9UM47 2321 aa4.44□□□□□ -1.7
CAPNS1-208ENST00000589162 ATRQ13535 2644 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 TRBV20OR9-2A0A075B6H5 130 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 TRAV2A0A0B4J234 112 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 H3BMM0 161 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 K7EIL1 84 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 PRM2P04554 102 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 RBMY1A1P0DJD3 496 aaKnown RBP4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 RBMY1CP0DJD4 496 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 RPL35P42766 123 aaKnown RBP4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 CSN1S1P47710 185 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 ZNF80P51504 273 aaPredicted RBP4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 SNRPD3P62318 126 aaKnown RBP4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 FLI1Q01543 452 aaPredicted RBP4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 EGFEM1PQ0D2K5 195 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 BTN1A1Q13410 526 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 PEA15Q15121 130 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 RBMY1FQ15415 496 aaKnown RBP4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 CENPWQ5EE01 88 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 EBLN2Q6P2I7 272 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 AMTNQ6UX39 209 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 FOXI2Q6ZQN5 318 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 TRPT1Q86TN4 253 aaKnown RBP4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 GTSCR1Q86UQ5 136 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 LYPD1Q8N2G4 141 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 C11orf52Q96A22 123 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 IGF2BP2-AS1Q96M15 143 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 ATG101Q9BSB4 218 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 SAV1Q9H4B6 383 aaPredicted RBP4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 PRELID1Q9Y255 219 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 ARL2-SNX15V9GYD0 113 aa4.43□□□□□ -1.7
CAPNS1-208ENST00000589162 ZNF727A8MUV8 499 aa4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 IGLV2-8P01709 118 aa4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 HLA-DRB4P13762 266 aa4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 ZNF138P52744 262 aa4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 UBE2G1P62253 170 aa4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 OR5I1Q13606 314 aa4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 PMS2P11Q13670 270 aa4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 C21orf62-AS1Q17RA5 79 aa4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 PRR27Q6MZM9 219 aa4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 LINC00322Q6ZN03 302 aaPredicted RBP4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 ZFAND2AQ8N6M9 145 aa4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 TMEM75Q8N9X5 138 aa4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 OR10J6PQ8NGY7 276 aa4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 MRPL53Q96EL3 112 aaKnown RBP4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 ZC2HC1AQ96GY0 325 aa4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 RETNQ9HD89 108 aa4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 ZNF492Q9P255 531 aa4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 HLA-DRB4X5D2U9 266 aa4.42□□□□□ -1.7
CAPNS1-208ENST00000589162 IGHV3OR16-12A0A075B7B8 117 aa4.41□□□□□ -1.7
CAPNS1-208ENST00000589162 TRAV12-3A0A0B4J271 114 aa4.41□□□□□ -1.7
CAPNS1-208ENST00000589162 TMEM218A2RU14 115 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms