RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 AJUBAQ96IF1 538 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 C8orf49Q96NF6 230 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 ASCL2Q99929 193 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 HIF1ANQ9NWT6 349 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 LAMTOR2Q9Y2Q5 125 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 IGKV2-40A0A087WW87 121 aaPredicted RBP5.74□□□□□ -1.49
ZNF540-206ENST00000589117 FAM223BA6NKX1 122 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 OVOL3O00110 214 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 NDUFS8O00217 210 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 BUB3O43684 328 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 IGKV2D-40P01614 121 aaPredicted RBP5.74□□□□□ -1.49
ZNF540-206ENST00000589117 CSN3P07498 182 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 TWIST1Q15672 202 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 FAM120AOSQ5T036 256 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 FAM223AQ8IWN6 122 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 PIMREGQ9BSJ6 248 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 MOB4Q9Y3A3 225 aa5.74□□□□□ -1.49
ZNF540-206ENST00000589117 ZZEF1O43149 2961 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 A0A1W2PPR1 153 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 ORM1P02763 201 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 PPBPP02775 128 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 ZNF25P17030 456 aaPredicted RBP5.73□□□□□ -1.49
ZNF540-206ENST00000589117 TSPOP30536 169 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 FAM104BQ5XKR9 115 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 CLEC19AQ6UXS0 136 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 URB1-AS1Q96HZ7 61 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 MS4A6AQ9H2W1 248 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 LRBAP50851 2863 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 TMSB15BA0A087X1C1 80 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 CKS2P33552 79 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 FBLN7Q53RD9 439 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 TMEM78Q5T7P6 136 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 SMIM15Q7Z3B0 74 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 SPATA12Q7Z6I5 190 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 C5orf56Q8N8D9 126 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 MRPL53Q96EL3 112 aaKnown RBP5.73□□□□□ -1.49
ZNF540-206ENST00000589117 PRELID3AQ96N28 172 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 SMAD5-AS1Q9Y6J3 95 aa5.73□□□□□ -1.49
ZNF540-206ENST00000589117 TRAV41A0A0B4J266 112 aa5.72□□□□□ -1.49
ZNF540-206ENST00000589117 IGHV3-35A0A0C4DH35 117 aa5.72□□□□□ -1.49
ZNF540-206ENST00000589117 M0QZ24 198 aa5.72□□□□□ -1.49
ZNF540-206ENST00000589117 IGLL1P15814 213 aa5.72□□□□□ -1.49
ZNF540-206ENST00000589117 GNLYP22749 145 aa5.72□□□□□ -1.49
ZNF540-206ENST00000589117 HIST1H1AQ02539 215 aaPredicted RBP5.72□□□□□ -1.49
ZNF540-206ENST00000589117 PAX8Q06710 450 aa5.72□□□□□ -1.49
ZNF540-206ENST00000589117 GAGE1Q13065 139 aa5.72□□□□□ -1.49
ZNF540-206ENST00000589117 CLEC2AQ6UVW9 174 aa5.72□□□□□ -1.49
ZNF540-206ENST00000589117 VGLL1Q99990 258 aa5.72□□□□□ -1.49
ZNF540-206ENST00000589117 FAM30AQ9NZY2 134 aa5.72□□□□□ -1.49
ZNF540-206ENST00000589117 U3KQK5 164 aa5.72□□□□□ -1.49
ZNF540-206ENST00000589117 TACC2O95359 2948 aa5.72□□□□□ -1.49
ZNF540-206ENST00000589117 ARHGAP32A7KAX9 2087 aa5.71□□□□□ -1.49
ZNF540-206ENST00000589117 IGHV1-69DA0A0B4J2H0 117 aa5.71□□□□□ -1.49
ZNF540-206ENST00000589117 D6R8Y8 96 aa5.71□□□□□ -1.49
ZNF540-206ENST00000589117 IGHV1-69P01742 117 aa5.71□□□□□ -1.49
ZNF540-206ENST00000589117 A0A1W2PRX2 142 aa5.71□□□□□ -1.5
ZNF540-206ENST00000589117 G3V318 75 aa5.71□□□□□ -1.5
ZNF540-206ENST00000589117 G0S2P27469 103 aa5.71□□□□□ -1.5
ZNF540-206ENST00000589117 ZNF138P52744 262 aa5.71□□□□□ -1.5
ZNF540-206ENST00000589117 PSMG4Q5JS54 123 aa5.71□□□□□ -1.5
ZNF540-206ENST00000589117 SLC25A34Q6PIV7 304 aa5.71□□□□□ -1.5
ZNF540-206ENST00000589117 USMG5Q96IX5 58 aa5.71□□□□□ -1.5
ZNF540-206ENST00000589117 CCL19Q99731 98 aa5.71□□□□□ -1.5
ZNF540-206ENST00000589117 PMCHL2Q9BQD1 86 aa5.71□□□□□ -1.5
ZNF540-206ENST00000589117 MEGF9Q9H1U4 602 aa5.71□□□□□ -1.5
ZNF540-206ENST00000589117 TIMM8BQ9Y5J9 83 aaPredicted RBP5.71□□□□□ -1.5
ZNF540-206ENST00000589117 IGF2RP11717 2491 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 IGHV3OR16-8A0A075B7F1 116 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 H0Y8G0 127 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 H3BUA1 57 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 IGHV4-39P01824 125 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 TRGV3P03979 118 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 CRIP2P52943 208 aaPredicted RBP5.7□□□□□ -1.5
ZNF540-206ENST00000589117 AMN1Q8IY45 258 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 Q8TAT8 98 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 ZNF747Q9BV97 191 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 CNFNQ9BYD5 112 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 LENEPQ9Y5L5 61 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 LOC389332A0A1B0GUA5 103 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 TMEM213A2RRL7 107 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 DLEU1O43261 78 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 TCF21O43680 179 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 IGLC6P0CF74 106 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 IFI27P40305 119 aaPredicted RBP5.7□□□□□ -1.5
ZNF540-206ENST00000589117 MAJINQ3KP22 176 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 MRPL51Q4U2R6 128 aaKnown RBP5.7□□□□□ -1.5
ZNF540-206ENST00000589117 LINC01545Q5VT33 79 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 C12orf54Q6X4T0 127 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 TMEM208Q9BTX3 173 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 MAP1LC3AQ9H492 121 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 NXT2Q9NPJ8 142 aaKnown RBP5.7□□□□□ -1.5
ZNF540-206ENST00000589117 PPP1R14DQ9NXH3 145 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 GOLT1BQ9Y3E0 138 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 NBASA2RRP1 2371 aa5.7□□□□□ -1.5
ZNF540-206ENST00000589117 A0A0G2JLM5 398 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 BRI3O95415 125 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 IGHG4P01861 327 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 HBDP02042 147 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 IGF1P05019 195 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms