RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 C5orf17Q8NAS9 161 aa10.65□□□□□ -0.7
CNN1-208ENST00000588935 LINC00477Q96M19 166 aa10.65□□□□□ -0.7
CNN1-208ENST00000588935 CLUHP3Q96NS8 147 aa10.65□□□□□ -0.7
CNN1-208ENST00000588935 OVOL2Q9BRP0 275 aa10.65□□□□□ -0.7
CNN1-208ENST00000588935 TRAV8-1A0A0A6YYK1 113 aa10.64□□□□□ -0.71
CNN1-208ENST00000588935 TRAV1-1A0A0B4J248 108 aa10.64□□□□□ -0.71
CNN1-208ENST00000588935 A8MTW9 85 aa10.64□□□□□ -0.71
CNN1-208ENST00000588935 TEX261Q6UWH6 196 aa10.64□□□□□ -0.71
CNN1-208ENST00000588935 C9orf47Q6ZRZ4 202 aa10.64□□□□□ -0.71
CNN1-208ENST00000588935 ZNF680Q8NEM1 530 aa10.64□□□□□ -0.71
CNN1-208ENST00000588935 RNF183Q96D59 192 aa10.64□□□□□ -0.71
CNN1-208ENST00000588935 C1QTNF4Q9BXJ3 329 aa10.64□□□□□ -0.71
CNN1-208ENST00000588935 TRAV34A0A0B4J273 112 aa10.63□□□□□ -0.71
CNN1-208ENST00000588935 TCRAP04437 139 aa10.63□□□□□ -0.71
CNN1-208ENST00000588935 ZNF138P52744 262 aa10.63□□□□□ -0.71
CNN1-208ENST00000588935 OR11H2Q8NH07 326 aa10.63□□□□□ -0.71
CNN1-208ENST00000588935 LINC00479Q96M42 142 aa10.63□□□□□ -0.71
CNN1-208ENST00000588935 RARRES2Q99969 163 aa10.63□□□□□ -0.71
CNN1-208ENST00000588935 U3KQK5 164 aa10.63□□□□□ -0.71
CNN1-208ENST00000588935 TSPOP30536 169 aa10.62□□□□□ -0.71
CNN1-208ENST00000588935 RNASE4P34096 147 aaKnown RBP10.62□□□□□ -0.71
CNN1-208ENST00000588935 LEPP41159 167 aa10.62□□□□□ -0.71
CNN1-208ENST00000588935 CDKN1BP46527 198 aa10.62□□□□□ -0.71
CNN1-208ENST00000588935 PPT1P50897 306 aa10.62□□□□□ -0.71
CNN1-208ENST00000588935 CSNK1G2-AS1Q8NCQ2 148 aa10.62□□□□□ -0.71
CNN1-208ENST00000588935 TMEM208Q9BTX3 173 aa10.62□□□□□ -0.71
CNN1-208ENST00000588935 ZNF492Q9P255 531 aa10.62□□□□□ -0.71
CNN1-208ENST00000588935 RBAKDNA6NC62 111 aa10.61□□□□□ -0.71
CNN1-208ENST00000588935 C11orf94C9JXX5 98 aa10.61□□□□□ -0.71
CNN1-208ENST00000588935 K7EQM0 130 aa10.61□□□□□ -0.71
CNN1-208ENST00000588935 PEX7O00628 323 aa10.61□□□□□ -0.71
CNN1-208ENST00000588935 DEFB4AO15263 64 aa10.61□□□□□ -0.71
CNN1-208ENST00000588935 CRXO43186 299 aaPredicted RBP10.61□□□□□ -0.71
CNN1-208ENST00000588935 AMBPP02760 352 aa10.61□□□□□ -0.71
CNN1-208ENST00000588935 PRM2P04554 102 aa10.61□□□□□ -0.71
CNN1-208ENST00000588935 GPX1P07203 203 aa10.61□□□□□ -0.71
CNN1-208ENST00000588935 HTN1P15515 57 aa10.61□□□□□ -0.71
CNN1-208ENST00000588935 PRNTQ86SH4 94 aa10.61□□□□□ -0.71
CNN1-208ENST00000588935 C1orf158Q8N1D5 194 aa10.61□□□□□ -0.71
CNN1-208ENST00000588935 IGF2BP2-AS1Q96M15 143 aa10.61□□□□□ -0.71
CNN1-208ENST00000588935 NKX6-2Q9C056 277 aaPredicted RBP10.61□□□□□ -0.71
CNN1-208ENST00000588935 PSG8Q9UQ74 426 aa10.61□□□□□ -0.71
CNN1-208ENST00000588935 TRAV12-3A0A0B4J271 114 aa10.6□□□□□ -0.71
CNN1-208ENST00000588935 F6UZH7 168 aa10.6□□□□□ -0.71
CNN1-208ENST00000588935 INSP01308 110 aa10.6□□□□□ -0.71
CNN1-208ENST00000588935 IFNA1P01562 189 aa10.6□□□□□ -0.71
CNN1-208ENST00000588935 CCDC28AQ8IWP9 274 aa10.6□□□□□ -0.71
CNN1-208ENST00000588935 CYB561D1Q8N8Q1 229 aa10.6□□□□□ -0.71
CNN1-208ENST00000588935 LINC01587Q99440 93 aa10.6□□□□□ -0.71
CNN1-208ENST00000588935 ATG101Q9BSB4 218 aa10.6□□□□□ -0.71
CNN1-208ENST00000588935 MANBALQ9NQG1 85 aa10.6□□□□□ -0.71
CNN1-208ENST00000588935 GOLT1BQ9Y3E0 138 aa10.6□□□□□ -0.71
CNN1-208ENST00000588935 TENM3Q9P273 2699 aa10.6□□□□□ -0.71
CNN1-208ENST00000588935 TGP01266 2768 aa10.59□□□□□ -0.71
CNN1-208ENST00000588935 SCO2A0A1W2PP80 73 aa10.59□□□□□ -0.71
CNN1-208ENST00000588935 ZNF705GA8MUZ8 300 aaPredicted RBP10.59□□□□□ -0.71
CNN1-208ENST00000588935 RBMY1A1P0DJD3 496 aaKnown RBP10.59□□□□□ -0.71
CNN1-208ENST00000588935 RBMY1CP0DJD4 496 aa10.59□□□□□ -0.71
CNN1-208ENST00000588935 AKR1C3P42330 323 aa10.59□□□□□ -0.71
CNN1-208ENST00000588935 FLI1Q01543 452 aaPredicted RBP10.59□□□□□ -0.71
CNN1-208ENST00000588935 BTN1A1Q13410 526 aa10.59□□□□□ -0.71
CNN1-208ENST00000588935 RBMY1FQ15415 496 aaKnown RBP10.59□□□□□ -0.71
CNN1-208ENST00000588935 GFI1BQ5VTD9 330 aa10.59□□□□□ -0.71
CNN1-208ENST00000588935 ARL6IP6Q8N6S5 226 aa10.59□□□□□ -0.71
CNN1-208ENST00000588935 TVP23CQ96ET8 276 aa10.59□□□□□ -0.71
CNN1-208ENST00000588935 TP53TG1Q9Y2A0 90 aa10.59□□□□□ -0.71
CNN1-208ENST00000588935 PRKDCP78527 4128 aaKnown RBP10.59□□□□□ -0.71
CNN1-208ENST00000588935 PRR9Q5T870 116 aa10.58□□□□□ -0.72
CNN1-208ENST00000588935 Q6ZQT7 251 aa10.58□□□□□ -0.72
CNN1-208ENST00000588935 ZFAND2AQ8N6M9 145 aa10.58□□□□□ -0.72
CNN1-208ENST00000588935 HIST1H2BAQ96A08 127 aa10.58□□□□□ -0.72
CNN1-208ENST00000588935 FAM19A4Q96LR4 140 aa10.58□□□□□ -0.72
CNN1-208ENST00000588935 C8orf49Q96NF6 230 aa10.58□□□□□ -0.72
CNN1-208ENST00000588935 ODF3Q96PU9 254 aa10.58□□□□□ -0.72
CNN1-208ENST00000588935 TREM1Q9NP99 234 aa10.58□□□□□ -0.72
CNN1-208ENST00000588935 ARL2-SNX15V9GYD0 113 aa10.58□□□□□ -0.72
CNN1-208ENST00000588935 X6R8D5 127 aa10.58□□□□□ -0.72
CNN1-208ENST00000588935 SERTM2A0A1B0GWG4 89 aa10.57□□□□□ -0.72
CNN1-208ENST00000588935 C7orf71A4D174 169 aa10.57□□□□□ -0.72
CNN1-208ENST00000588935 IGLV2-11P01706 119 aa10.57□□□□□ -0.72
CNN1-208ENST00000588935 BCL2P10415 239 aa10.57□□□□□ -0.72
CNN1-208ENST00000588935 UBE2G1P62253 170 aa10.57□□□□□ -0.72
CNN1-208ENST00000588935 VAX2Q9UIW0 290 aa10.57□□□□□ -0.72
CNN1-208ENST00000588935 IGHV4-28A0A0C4DH34 117 aa10.56□□□□□ -0.72
CNN1-208ENST00000588935 A0A0J9YWU9 116 aa10.56□□□□□ -0.72
CNN1-208ENST00000588935 LOC102723971A0A1B0GUV8 181 aa10.56□□□□□ -0.72
CNN1-208ENST00000588935 RBFOX3A6NFN3 312 aa10.56□□□□□ -0.72
CNN1-208ENST00000588935 CRISP2P16562 243 aa10.56□□□□□ -0.72
CNN1-208ENST00000588935 EMP1P54849 157 aa10.56□□□□□ -0.72
CNN1-208ENST00000588935 ZNF705AQ6ZN79 300 aaPredicted RBP10.56□□□□□ -0.72
CNN1-208ENST00000588935 TMEM75Q8N9X5 138 aa10.56□□□□□ -0.72
CNN1-208ENST00000588935 LYPD6BQ8NI32 183 aa10.56□□□□□ -0.72
CNN1-208ENST00000588935 NIPSNAP3BQ9BS92 247 aa10.56□□□□□ -0.72
CNN1-208ENST00000588935 NDFIP1Q9BT67 221 aa10.56□□□□□ -0.72
CNN1-208ENST00000588935 DNAH9Q9NYC9 4486 aa10.56□□□□□ -0.72
CNN1-208ENST00000588935 KLLNB2CW77 178 aa10.55□□□□□ -0.72
CNN1-208ENST00000588935 AZU1P20160 251 aa10.55□□□□□ -0.72
CNN1-208ENST00000588935 IFITM2Q01629 132 aa10.55□□□□□ -0.72
CNN1-208ENST00000588935 MEF2BQ02080 365 aaPredicted RBP10.55□□□□□ -0.72
CNN1-208ENST00000588935 TOR2AQ5JU69 321 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms