RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CST9LP1Q5W188 147 aa14.31□□□□□ -0.12
CIRBP-220ENST00000588917 XCL2Q9UBD3 114 aa14.31□□□□□ -0.12
CIRBP-220ENST00000588917 TRBV7-9A0A0J9YWB2 115 aa14.3□□□□□ -0.12
CIRBP-220ENST00000588917 GGTLC3B5MD39 225 aa14.3□□□□□ -0.12
CIRBP-220ENST00000588917 IFNA1P01562 189 aa14.3□□□□□ -0.12
CIRBP-220ENST00000588917 TCRAP04437 139 aa14.3□□□□□ -0.12
CIRBP-220ENST00000588917 NMBP08949 121 aa14.3□□□□□ -0.12
CIRBP-220ENST00000588917 GIG44P09565 113 aaPredicted RBP14.3□□□□□ -0.12
CIRBP-220ENST00000588917 CDKN1BP46527 198 aa14.3□□□□□ -0.12
CIRBP-220ENST00000588917 ZNF138P52744 262 aa14.3□□□□□ -0.12
CIRBP-220ENST00000588917 DEFB135Q30KP9 77 aa14.3□□□□□ -0.12
CIRBP-220ENST00000588917 HIST1H2BAQ96A08 127 aa14.3□□□□□ -0.12
CIRBP-220ENST00000588917 WWC2-AS2Q96NR7 200 aa14.3□□□□□ -0.12
CIRBP-220ENST00000588917 TXNDC17Q9BRA2 123 aa14.3□□□□□ -0.12
CIRBP-220ENST00000588917 YTHDF2Q9Y5A9 579 aaKnown RBP14.3□□□□□ -0.12
CIRBP-220ENST00000588917 IGKV2-40A0A087WW87 121 aaPredicted RBP14.29□□□□□ -0.12
CIRBP-220ENST00000588917 PAGE4O60829 102 aa14.29□□□□□ -0.12
CIRBP-220ENST00000588917 IGKV2D-40P01614 121 aaPredicted RBP14.29□□□□□ -0.12
CIRBP-220ENST00000588917 CT45A10P0DMU9 189 aa14.29□□□□□ -0.12
CIRBP-220ENST00000588917 TAGLN2P37802 199 aaKnown RBP14.29□□□□□ -0.12
CIRBP-220ENST00000588917 ERCC8Q13216 396 aa14.29□□□□□ -0.12
CIRBP-220ENST00000588917 IGF2BP2-AS1Q96M15 143 aa14.29□□□□□ -0.12
CIRBP-220ENST00000588917 VGLL1Q99990 258 aa14.29□□□□□ -0.12
CIRBP-220ENST00000588917 OVOL2Q9BRP0 275 aa14.29□□□□□ -0.12
CIRBP-220ENST00000588917 ATG101Q9BSB4 218 aa14.29□□□□□ -0.12
CIRBP-220ENST00000588917 ZNF492Q9P255 531 aa14.29□□□□□ -0.12
CIRBP-220ENST00000588917 RPH3ALQ9UNE2 315 aa14.29□□□□□ -0.12
CIRBP-220ENST00000588917 LENEPQ9Y5L5 61 aa14.29□□□□□ -0.12
CIRBP-220ENST00000588917 FXYD7P58549 80 aa14.28□□□□□ -0.12
CIRBP-220ENST00000588917 CCL20P78556 96 aa14.28□□□□□ -0.12
CIRBP-220ENST00000588917 SPINK13Q1W4C9 94 aa14.28□□□□□ -0.12
CIRBP-220ENST00000588917 GOLT1AQ6ZVE7 132 aa14.28□□□□□ -0.12
CIRBP-220ENST00000588917 CYB561D1Q8N8Q1 229 aa14.28□□□□□ -0.12
CIRBP-220ENST00000588917 CSNK1G2-AS1Q8NCQ2 148 aa14.28□□□□□ -0.12
CIRBP-220ENST00000588917 ZNF680Q8NEM1 530 aa14.28□□□□□ -0.12
CIRBP-220ENST00000588917 RARRES2Q99969 163 aa14.28□□□□□ -0.12
CIRBP-220ENST00000588917 GNG13Q9P2W3 67 aa14.28□□□□□ -0.12
CIRBP-220ENST00000588917 GOLT1BQ9Y3E0 138 aa14.28□□□□□ -0.12
CIRBP-220ENST00000588917 PRB4P10163 310 aaPredicted RBP14.27□□□□□ -0.13
CIRBP-220ENST00000588917 CCDC28AQ8IWP9 274 aa14.27□□□□□ -0.13
CIRBP-220ENST00000588917 C20orf144Q9BQM9 153 aa14.27□□□□□ -0.13
CIRBP-220ENST00000588917 U3KQK5 164 aa14.27□□□□□ -0.13
CIRBP-220ENST00000588917 M0R2Z0 102 aa14.26□□□□□ -0.13
CIRBP-220ENST00000588917 INSP01308 110 aa14.26□□□□□ -0.13
CIRBP-220ENST00000588917 OR11H2Q8NH07 326 aa14.26□□□□□ -0.13
CIRBP-220ENST00000588917 LYPD6BQ8NI32 183 aa14.26□□□□□ -0.13
CIRBP-220ENST00000588917 GPX1P07203 203 aa14.25□□□□□ -0.13
CIRBP-220ENST00000588917 CRISP2P16562 243 aa14.25□□□□□ -0.13
CIRBP-220ENST00000588917 GNG5P63218 68 aa14.25□□□□□ -0.13
CIRBP-220ENST00000588917 TMEM256Q8N2U0 113 aa14.25□□□□□ -0.13
CIRBP-220ENST00000588917 FAM19A4Q96LR4 140 aa14.25□□□□□ -0.13
CIRBP-220ENST00000588917 NDFIP1Q9BT67 221 aa14.25□□□□□ -0.13
CIRBP-220ENST00000588917 TMEM208Q9BTX3 173 aa14.25□□□□□ -0.13
CIRBP-220ENST00000588917 DNAH9Q9NYC9 4486 aa14.25□□□□□ -0.13
CIRBP-220ENST00000588917 SMIM9A6NGZ8 99 aa14.24□□□□□ -0.13
CIRBP-220ENST00000588917 C11orf94C9JXX5 98 aa14.24□□□□□ -0.13
CIRBP-220ENST00000588917 PEX7O00628 323 aa14.24□□□□□ -0.13
CIRBP-220ENST00000588917 CRXO43186 299 aaPredicted RBP14.24□□□□□ -0.13
CIRBP-220ENST00000588917 TMEM75Q8N9X5 138 aa14.24□□□□□ -0.13
CIRBP-220ENST00000588917 AGRNO00468 2067 aa14.24□□□□□ -0.13
CIRBP-220ENST00000588917 S100A9P06702 114 aaKnown RBP14.23□□□□□ -0.13
CIRBP-220ENST00000588917 ATP5G3P48201 142 aa14.23□□□□□ -0.13
CIRBP-220ENST00000588917 FLI1Q01543 452 aaPredicted RBP14.23□□□□□ -0.13
CIRBP-220ENST00000588917 SAPCD1Q5SSQ6 148 aa14.23□□□□□ -0.13
CIRBP-220ENST00000588917 ZNF705AQ6ZN79 300 aaPredicted RBP14.23□□□□□ -0.13
CIRBP-220ENST00000588917 NEU1Q99519 415 aa14.23□□□□□ -0.13
CIRBP-220ENST00000588917 RETNQ9HD89 108 aa14.23□□□□□ -0.13
CIRBP-220ENST00000588917 VAX2Q9UIW0 290 aa14.23□□□□□ -0.13
CIRBP-220ENST00000588917 PSG8Q9UQ74 426 aa14.23□□□□□ -0.13
CIRBP-220ENST00000588917 RYR3Q15413 4870 aa14.23□□□□□ -0.13
CIRBP-220ENST00000588917 TRAV12-2A0A075B6T6 113 aa14.22□□□□□ -0.13
CIRBP-220ENST00000588917 KLLNB2CW77 178 aa14.22□□□□□ -0.13
CIRBP-220ENST00000588917 MIFP14174 115 aa14.22□□□□□ -0.13
CIRBP-220ENST00000588917 NIPSNAP3BQ9BS92 247 aa14.22□□□□□ -0.13
CIRBP-220ENST00000588917 PDE6DO43924 150 aa14.21□□□□□ -0.13
CIRBP-220ENST00000588917 UBE2G1P62253 170 aa14.21□□□□□ -0.13
CIRBP-220ENST00000588917 MEF2BQ02080 365 aaPredicted RBP14.21□□□□□ -0.13
CIRBP-220ENST00000588917 C1orf158Q8N1D5 194 aa14.21□□□□□ -0.13
CIRBP-220ENST00000588917 FMC1Q96HJ9 113 aa14.21□□□□□ -0.13
CIRBP-220ENST00000588917 LINC01587Q99440 93 aa14.21□□□□□ -0.13
CIRBP-220ENST00000588917 KLF12Q9Y4X4 402 aa14.21□□□□□ -0.13
CIRBP-220ENST00000588917 IGHV3OR16-12A0A075B7B8 117 aa14.2□□□□□ -0.14
CIRBP-220ENST00000588917 TRAV8-1A0A0A6YYK1 113 aa14.2□□□□□ -0.14
CIRBP-220ENST00000588917 C7orf71A4D174 169 aa14.2□□□□□ -0.14
CIRBP-220ENST00000588917 H7BYZ3 331 aa14.2□□□□□ -0.14
CIRBP-220ENST00000588917 BCL2P10415 239 aa14.2□□□□□ -0.14
CIRBP-220ENST00000588917 RAB14P61106 215 aa14.2□□□□□ -0.14
CIRBP-220ENST00000588917 GFI1BQ5VTD9 330 aa14.2□□□□□ -0.14
CIRBP-220ENST00000588917 Q8TAT8 98 aa14.2□□□□□ -0.14
CIRBP-220ENST00000588917 TREM1Q9NP99 234 aa14.2□□□□□ -0.14
CIRBP-220ENST00000588917 ZFP30Q9Y2G7 519 aa14.2□□□□□ -0.14
CIRBP-220ENST00000588917 TRBV6-1A0A0K0K1D8 114 aa14.19□□□□□ -0.14
CIRBP-220ENST00000588917 J3KRW8 73 aa14.19□□□□□ -0.14
CIRBP-220ENST00000588917 IGLV2-11P01706 119 aa14.19□□□□□ -0.14
CIRBP-220ENST00000588917 RNASE4P34096 147 aaKnown RBP14.19□□□□□ -0.14
CIRBP-220ENST00000588917 PRNTQ86SH4 94 aa14.19□□□□□ -0.14
CIRBP-220ENST00000588917 ZFAND2AQ8N6M9 145 aa14.19□□□□□ -0.14
CIRBP-220ENST00000588917 LINC00479Q96M42 142 aa14.19□□□□□ -0.14
CIRBP-220ENST00000588917 TRAV12-3A0A0B4J271 114 aa14.18□□□□□ -0.14
CIRBP-220ENST00000588917 RBFOX3A6NFN3 312 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms