RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 DEFB1P60022 68 aa6.63□□□□□ -1.35
CIRBP-218ENST00000588344 CST9LP1Q5W188 147 aa6.63□□□□□ -1.35
CIRBP-218ENST00000588344 TEX261Q6UWH6 196 aa6.63□□□□□ -1.35
CIRBP-218ENST00000588344 ALKAL2Q6UX46 152 aa6.63□□□□□ -1.35
CIRBP-218ENST00000588344 TMEM256Q8N2U0 113 aa6.63□□□□□ -1.35
CIRBP-218ENST00000588344 CSNK1G2-AS1Q8NCQ2 148 aa6.63□□□□□ -1.35
CIRBP-218ENST00000588344 RARRES2Q99969 163 aa6.63□□□□□ -1.35
CIRBP-218ENST00000588344 ATG101Q9BSB4 218 aa6.63□□□□□ -1.35
CIRBP-218ENST00000588344 AGPAT4-IT1Q9H0P7 198 aa6.63□□□□□ -1.35
CIRBP-218ENST00000588344 TMPRSS5Q9H3S3 457 aa6.63□□□□□ -1.35
CIRBP-218ENST00000588344 XCL2Q9UBD3 114 aa6.63□□□□□ -1.35
CIRBP-218ENST00000588344 GOLT1BQ9Y3E0 138 aa6.63□□□□□ -1.35
CIRBP-218ENST00000588344 GGTLC3B5MD39 225 aa6.62□□□□□ -1.35
CIRBP-218ENST00000588344 TCRAP04437 139 aa6.62□□□□□ -1.35
CIRBP-218ENST00000588344 S100A9P06702 114 aaKnown RBP6.62□□□□□ -1.35
CIRBP-218ENST00000588344 CT45A10P0DMU9 189 aa6.62□□□□□ -1.35
CIRBP-218ENST00000588344 CRISP2P16562 243 aa6.62□□□□□ -1.35
CIRBP-218ENST00000588344 UBE2G2P60604 165 aa6.62□□□□□ -1.35
CIRBP-218ENST00000588344 DEFB135Q30KP9 77 aa6.62□□□□□ -1.35
CIRBP-218ENST00000588344 CYB561D1Q8N8Q1 229 aa6.62□□□□□ -1.35
CIRBP-218ENST00000588344 NEU1Q99519 415 aa6.62□□□□□ -1.35
CIRBP-218ENST00000588344 OVOL2Q9BRP0 275 aa6.62□□□□□ -1.35
CIRBP-218ENST00000588344 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
CIRBP-218ENST00000588344 KRTAP3-2Q9BYR7 98 aa6.62□□□□□ -1.35
CIRBP-218ENST00000588344 SLC35B3Q9H1N7 401 aa6.62□□□□□ -1.35
CIRBP-218ENST00000588344 ZNF492Q9P255 531 aa6.62□□□□□ -1.35
CIRBP-218ENST00000588344 U3KQK5 164 aa6.62□□□□□ -1.35
CIRBP-218ENST00000588344 IGKV2-40A0A087WW87 121 aaPredicted RBP6.61□□□□□ -1.35
CIRBP-218ENST00000588344 PAGE4O60829 102 aa6.61□□□□□ -1.35
CIRBP-218ENST00000588344 INSP01308 110 aa6.61□□□□□ -1.35
CIRBP-218ENST00000588344 IGKV2D-40P01614 121 aaPredicted RBP6.61□□□□□ -1.35
CIRBP-218ENST00000588344 MIFP14174 115 aa6.61□□□□□ -1.35
CIRBP-218ENST00000588344 ERCC8Q13216 396 aa6.61□□□□□ -1.35
CIRBP-218ENST00000588344 SPINK13Q1W4C9 94 aa6.61□□□□□ -1.35
CIRBP-218ENST00000588344 SAPCD1Q5SSQ6 148 aa6.61□□□□□ -1.35
CIRBP-218ENST00000588344 GOLT1AQ6ZVE7 132 aa6.61□□□□□ -1.35
CIRBP-218ENST00000588344 CCDC28AQ8IWP9 274 aa6.61□□□□□ -1.35
CIRBP-218ENST00000588344 TMEM75Q8N9X5 138 aa6.61□□□□□ -1.35
CIRBP-218ENST00000588344 ZNF680Q8NEM1 530 aa6.61□□□□□ -1.35
CIRBP-218ENST00000588344 OR11H2Q8NH07 326 aa6.61□□□□□ -1.35
CIRBP-218ENST00000588344 LYPD6BQ8NI32 183 aa6.61□□□□□ -1.35
CIRBP-218ENST00000588344 FAM19A4Q96LR4 140 aa6.61□□□□□ -1.35
CIRBP-218ENST00000588344 VGLL1Q99990 258 aa6.61□□□□□ -1.35
CIRBP-218ENST00000588344 NDFIP1Q9BT67 221 aa6.61□□□□□ -1.35
CIRBP-218ENST00000588344 TMEM208Q9BTX3 173 aa6.61□□□□□ -1.35
CIRBP-218ENST00000588344 GNG13Q9P2W3 67 aa6.61□□□□□ -1.35
CIRBP-218ENST00000588344 YTHDF2Q9Y5A9 579 aaKnown RBP6.61□□□□□ -1.35
CIRBP-218ENST00000588344 PRKDCP78527 4128 aaKnown RBP6.6□□□□□ -1.35
CIRBP-218ENST00000588344 A0A1B0GV50 99 aa6.6□□□□□ -1.35
CIRBP-218ENST00000588344 TMEM189A5PLL7 270 aa6.6□□□□□ -1.35
CIRBP-218ENST00000588344 KLLNB2CW77 178 aa6.6□□□□□ -1.35
CIRBP-218ENST00000588344 C11orf94C9JXX5 98 aa6.6□□□□□ -1.35
CIRBP-218ENST00000588344 H7BYZ3 331 aa6.6□□□□□ -1.35
CIRBP-218ENST00000588344 M0R2Z0 102 aa6.6□□□□□ -1.35
CIRBP-218ENST00000588344 PEX7O00628 323 aa6.6□□□□□ -1.35
CIRBP-218ENST00000588344 CRXO43186 299 aaPredicted RBP6.6□□□□□ -1.35
CIRBP-218ENST00000588344 PDE6DO43924 150 aa6.6□□□□□ -1.35
CIRBP-218ENST00000588344 GPX1P07203 203 aa6.6□□□□□ -1.35
CIRBP-218ENST00000588344 FXYD7P58549 80 aa6.6□□□□□ -1.35
CIRBP-218ENST00000588344 CCL20P78556 96 aa6.6□□□□□ -1.35
CIRBP-218ENST00000588344 ZNF705AQ6ZN79 300 aaPredicted RBP6.6□□□□□ -1.35
CIRBP-218ENST00000588344 NIPSNAP3BQ9BS92 247 aa6.6□□□□□ -1.35
CIRBP-218ENST00000588344 VAX2Q9UIW0 290 aa6.6□□□□□ -1.35
CIRBP-218ENST00000588344 RPH3ALQ9UNE2 315 aa6.6□□□□□ -1.35
CIRBP-218ENST00000588344 ZFP30Q9Y2G7 519 aa6.6□□□□□ -1.35
CIRBP-218ENST00000588344 TRBV6-1A0A0K0K1D8 114 aa6.59□□□□□ -1.35
CIRBP-218ENST00000588344 NDUFS6O75380 124 aaKnown RBP6.59□□□□□ -1.35
CIRBP-218ENST00000588344 TAS2R60P59551 318 aa6.59□□□□□ -1.35
CIRBP-218ENST00000588344 RAB14P61106 215 aa6.59□□□□□ -1.35
CIRBP-218ENST00000588344 MEF2BQ02080 365 aaPredicted RBP6.59□□□□□ -1.35
CIRBP-218ENST00000588344 FMC1Q96HJ9 113 aa6.59□□□□□ -1.35
CIRBP-218ENST00000588344 LINC01587Q99440 93 aa6.59□□□□□ -1.35
CIRBP-218ENST00000588344 TREM1Q9NP99 234 aa6.59□□□□□ -1.35
CIRBP-218ENST00000588344 PSG8Q9UQ74 426 aa6.59□□□□□ -1.35
CIRBP-218ENST00000588344 KLF12Q9Y4X4 402 aa6.59□□□□□ -1.35
CIRBP-218ENST00000588344 TRAV12-2A0A075B6T6 113 aa6.58□□□□□ -1.36
CIRBP-218ENST00000588344 C7orf71A4D174 169 aa6.58□□□□□ -1.36
CIRBP-218ENST00000588344 BCL2P10415 239 aa6.58□□□□□ -1.36
CIRBP-218ENST00000588344 UBE2G1P62253 170 aa6.58□□□□□ -1.36
CIRBP-218ENST00000588344 GNG5P63218 68 aa6.58□□□□□ -1.36
CIRBP-218ENST00000588344 FLI1Q01543 452 aaPredicted RBP6.58□□□□□ -1.36
CIRBP-218ENST00000588344 RRN3P1Q2M238 152 aa6.58□□□□□ -1.36
CIRBP-218ENST00000588344 ZNF493Q6ZR52 646 aa6.58□□□□□ -1.36
CIRBP-218ENST00000588344 C1orf158Q8N1D5 194 aa6.58□□□□□ -1.36
CIRBP-218ENST00000588344 IL17DQ8TAD2 202 aa6.58□□□□□ -1.36
CIRBP-218ENST00000588344 PYGO2Q9BRQ0 406 aa6.58□□□□□ -1.36
CIRBP-218ENST00000588344 LINC00467Q9BRT7 94 aa6.58□□□□□ -1.36
CIRBP-218ENST00000588344 IGHV3OR16-12A0A075B7B8 117 aa6.57□□□□□ -1.36
CIRBP-218ENST00000588344 TRAV21A0A0B4J279 112 aa6.57□□□□□ -1.36
CIRBP-218ENST00000588344 TEX48A0A1B0GUV7 120 aa6.57□□□□□ -1.36
CIRBP-218ENST00000588344 RBFOX3A6NFN3 312 aa6.57□□□□□ -1.36
CIRBP-218ENST00000588344 ZNF324O75467 553 aaPredicted RBP6.57□□□□□ -1.36
CIRBP-218ENST00000588344 RNASE4P34096 147 aaKnown RBP6.57□□□□□ -1.36
CIRBP-218ENST00000588344 AKR1C3P42330 323 aa6.57□□□□□ -1.36
CIRBP-218ENST00000588344 ATP5G3P48201 142 aa6.57□□□□□ -1.36
CIRBP-218ENST00000588344 TMEM183BQ1AE95 376 aa6.57□□□□□ -1.36
CIRBP-218ENST00000588344 SMUG1Q53HV7 270 aa6.57□□□□□ -1.36
CIRBP-218ENST00000588344 GFI1BQ5VTD9 330 aa6.57□□□□□ -1.36
CIRBP-218ENST00000588344 ZNF767PQ75MW2 155 aa6.57□□□□□ -1.36
CIRBP-218ENST00000588344 PRNTQ86SH4 94 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms