RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 IFITM2Q01629 132 aa7.81□□□□□ -1.16
SMARCA4-213ENST00000587988 DEFB135Q30KP9 77 aa7.81□□□□□ -1.16
SMARCA4-213ENST00000587988 ARL6IP6Q8N6S5 226 aa7.81□□□□□ -1.16
SMARCA4-213ENST00000587988 CSNK1G2-AS1Q8NCQ2 148 aa7.81□□□□□ -1.16
SMARCA4-213ENST00000587988 SGK494Q96LW2 274 aa7.81□□□□□ -1.16
SMARCA4-213ENST00000587988 LINC00477Q96M19 166 aa7.81□□□□□ -1.16
SMARCA4-213ENST00000587988 NKX6-2Q9C056 277 aaPredicted RBP7.81□□□□□ -1.16
SMARCA4-213ENST00000587988 ARL2-SNX15V9GYD0 113 aa7.81□□□□□ -1.16
SMARCA4-213ENST00000587988 TRAV12-2A0A075B6T6 113 aa7.8□□□□□ -1.16
SMARCA4-213ENST00000587988 TRAV34A0A0B4J273 112 aa7.8□□□□□ -1.16
SMARCA4-213ENST00000587988 J3KRW8 73 aa7.8□□□□□ -1.16
SMARCA4-213ENST00000587988 PPT1P50897 306 aa7.8□□□□□ -1.16
SMARCA4-213ENST00000587988 PMS2P11Q13670 270 aa7.8□□□□□ -1.16
SMARCA4-213ENST00000587988 Q6ZWC4 215 aa7.8□□□□□ -1.16
SMARCA4-213ENST00000587988 Q8TAT8 98 aa7.8□□□□□ -1.16
SMARCA4-213ENST00000587988 FAM19A4Q96LR4 140 aa7.8□□□□□ -1.16
SMARCA4-213ENST00000587988 LINC00479Q96M42 142 aa7.8□□□□□ -1.16
SMARCA4-213ENST00000587988 OVOL2Q9BRP0 275 aa7.8□□□□□ -1.16
SMARCA4-213ENST00000587988 MANBALQ9NQG1 85 aa7.8□□□□□ -1.16
SMARCA4-213ENST00000587988 PPP1R14DQ9NXH3 145 aa7.8□□□□□ -1.16
SMARCA4-213ENST00000587988 ZNF492Q9P255 531 aa7.8□□□□□ -1.16
SMARCA4-213ENST00000587988 C11orf94C9JXX5 98 aa7.79□□□□□ -1.16
SMARCA4-213ENST00000587988 PEX7O00628 323 aa7.79□□□□□ -1.16
SMARCA4-213ENST00000587988 SPRY2O43597 315 aa7.79□□□□□ -1.16
SMARCA4-213ENST00000587988 IGLV2-11P01706 119 aa7.79□□□□□ -1.16
SMARCA4-213ENST00000587988 NMBP08949 121 aa7.79□□□□□ -1.16
SMARCA4-213ENST00000587988 RBMY1A1P0DJD3 496 aaKnown RBP7.79□□□□□ -1.16
SMARCA4-213ENST00000587988 RBMY1CP0DJD4 496 aa7.79□□□□□ -1.16
SMARCA4-213ENST00000587988 RBMY1FQ15415 496 aaKnown RBP7.79□□□□□ -1.16
SMARCA4-213ENST00000587988 TMEM78Q5T7P6 136 aa7.79□□□□□ -1.16
SMARCA4-213ENST00000587988 RNF183Q96D59 192 aa7.79□□□□□ -1.16
SMARCA4-213ENST00000587988 TVP23CQ96ET8 276 aa7.79□□□□□ -1.16
SMARCA4-213ENST00000587988 RCHY1Q96PM5 261 aa7.79□□□□□ -1.16
SMARCA4-213ENST00000587988 RARRES2Q99969 163 aa7.79□□□□□ -1.16
SMARCA4-213ENST00000587988 SPATA25Q9BR10 227 aa7.79□□□□□ -1.16
SMARCA4-213ENST00000587988 ATG101Q9BSB4 218 aa7.79□□□□□ -1.16
SMARCA4-213ENST00000587988 HUWE1Q7Z6Z7 4374 aaKnown RBP7.79□□□□□ -1.16
SMARCA4-213ENST00000587988 SCO2A0A1W2PP80 73 aa7.78□□□□□ -1.16
SMARCA4-213ENST00000587988 BCL2P10415 239 aa7.78□□□□□ -1.16
SMARCA4-213ENST00000587988 CDKN1BP46527 198 aa7.78□□□□□ -1.16
SMARCA4-213ENST00000587988 ZNF138P52744 262 aa7.78□□□□□ -1.16
SMARCA4-213ENST00000587988 PRR9Q5T870 116 aa7.78□□□□□ -1.16
SMARCA4-213ENST00000587988 C1orf158Q8N1D5 194 aa7.78□□□□□ -1.16
SMARCA4-213ENST00000587988 ZFAND2AQ8N6M9 145 aa7.78□□□□□ -1.16
SMARCA4-213ENST00000587988 CYB561D1Q8N8Q1 229 aa7.78□□□□□ -1.16
SMARCA4-213ENST00000587988 HIST1H2BAQ96A08 127 aa7.78□□□□□ -1.16
SMARCA4-213ENST00000587988 IGF2BP2-AS1Q96M15 143 aa7.78□□□□□ -1.16
SMARCA4-213ENST00000587988 ODF3Q96PU9 254 aa7.78□□□□□ -1.16
SMARCA4-213ENST00000587988 C1QTNF4Q9BXJ3 329 aa7.78□□□□□ -1.16
SMARCA4-213ENST00000587988 PSG8Q9UQ74 426 aa7.78□□□□□ -1.16
SMARCA4-213ENST00000587988 LOC102723971A0A1B0GUV8 181 aa7.77□□□□□ -1.17
SMARCA4-213ENST00000587988 SERTM2A0A1B0GWG4 89 aa7.77□□□□□ -1.17
SMARCA4-213ENST00000587988 KLLNB2CW77 178 aa7.77□□□□□ -1.17
SMARCA4-213ENST00000587988 IFNA1P01562 189 aa7.77□□□□□ -1.17
SMARCA4-213ENST00000587988 NHLRC4P0CG21 123 aaPredicted RBP7.77□□□□□ -1.17
SMARCA4-213ENST00000587988 CRISP2P16562 243 aa7.77□□□□□ -1.17
SMARCA4-213ENST00000587988 LEPP41159 167 aa7.77□□□□□ -1.17
SMARCA4-213ENST00000587988 GFI1BQ5VTD9 330 aa7.77□□□□□ -1.17
SMARCA4-213ENST00000587988 Q6ZQT7 251 aa7.77□□□□□ -1.17
SMARCA4-213ENST00000587988 PRNTQ86SH4 94 aa7.77□□□□□ -1.17
SMARCA4-213ENST00000587988 TMEM75Q8N9X5 138 aa7.77□□□□□ -1.17
SMARCA4-213ENST00000587988 ZMAT4Q9H898 229 aa7.77□□□□□ -1.17
SMARCA4-213ENST00000587988 VAX2Q9UIW0 290 aa7.77□□□□□ -1.17
SMARCA4-213ENST00000587988 TP53TG1Q9Y2A0 90 aa7.77□□□□□ -1.17
SMARCA4-213ENST00000587988 IGHV3OR16-12A0A075B7B8 117 aa7.76□□□□□ -1.17
SMARCA4-213ENST00000587988 RBFOX3A6NFN3 312 aa7.76□□□□□ -1.17
SMARCA4-213ENST00000587988 F6UZH7 168 aa7.76□□□□□ -1.17
SMARCA4-213ENST00000587988 K7EQM0 130 aa7.76□□□□□ -1.17
SMARCA4-213ENST00000587988 AMBPP02760 352 aa7.76□□□□□ -1.17
SMARCA4-213ENST00000587988 PRM2P04554 102 aa7.76□□□□□ -1.17
SMARCA4-213ENST00000587988 TSPOP30536 169 aa7.76□□□□□ -1.17
SMARCA4-213ENST00000587988 RNASE4P34096 147 aaKnown RBP7.76□□□□□ -1.17
SMARCA4-213ENST00000587988 FLI1Q01543 452 aaPredicted RBP7.76□□□□□ -1.17
SMARCA4-213ENST00000587988 MEF2BQ02080 365 aaPredicted RBP7.76□□□□□ -1.17
SMARCA4-213ENST00000587988 BTN1A1Q13410 526 aa7.76□□□□□ -1.17
SMARCA4-213ENST00000587988 OR11H2Q8NH07 326 aa7.76□□□□□ -1.17
SMARCA4-213ENST00000587988 C2CD4CQ8TF44 421 aa7.76□□□□□ -1.17
SMARCA4-213ENST00000587988 C8orf49Q96NF6 230 aa7.76□□□□□ -1.17
SMARCA4-213ENST00000587988 TCEAL7Q9BRU2 100 aa7.76□□□□□ -1.17
SMARCA4-213ENST00000587988 KLF12Q9Y4X4 402 aa7.76□□□□□ -1.17
SMARCA4-213ENST00000587988 X6R8D5 127 aa7.76□□□□□ -1.17
SMARCA4-213ENST00000587988 TRAV12-3A0A0B4J271 114 aa7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 TRBV7-9A0A0J9YWB2 115 aa7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 C7orf71A4D174 169 aa7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 ZNF324O75467 553 aaPredicted RBP7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 INSP01308 110 aa7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 GPX1P07203 203 aa7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 TAGLN2P37802 199 aaKnown RBP7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 AKR1C3P42330 323 aa7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 TOR2AQ5JU69 321 aa7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 ZNF506Q5JVG8 444 aa7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 ZNF705AQ6ZN79 300 aaPredicted RBP7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 ZNF767PQ75MW2 155 aa7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 C11orf52Q96A22 123 aa7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 FAM210AQ96ND0 272 aa7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 TXNDC17Q9BRA2 123 aa7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 DERL1Q9BUN8 251 aa7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 TREM1Q9NP99 234 aa7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 LENEPQ9Y5L5 61 aa7.75□□□□□ -1.17
SMARCA4-213ENST00000587988 UBE2G1P62253 170 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms