RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 AGPAT4-IT1Q9H0P7 198 aa12.48□□□□□ -0.41
TPM4-206ENST00000587201 C7orf71A4D174 169 aa12.47□□□□□ -0.41
TPM4-206ENST00000587201 SNURFLB1AK76 121 aa12.47□□□□□ -0.41
TPM4-206ENST00000587201 PHYHIPLQ96FC7 376 aa12.47□□□□□ -0.41
TPM4-206ENST00000587201 PYGO2Q9BRQ0 406 aa12.47□□□□□ -0.41
TPM4-206ENST00000587201 IGKV2-40A0A087WW87 121 aaPredicted RBP12.46□□□□□ -0.41
TPM4-206ENST00000587201 M0R2N4 97 aa12.46□□□□□ -0.41
TPM4-206ENST00000587201 IGKV2D-40P01614 121 aaPredicted RBP12.46□□□□□ -0.41
TPM4-206ENST00000587201 TMEM78Q5T7P6 136 aa12.46□□□□□ -0.41
TPM4-206ENST00000587201 C9orf47Q6ZRZ4 202 aa12.46□□□□□ -0.41
TPM4-206ENST00000587201 FAM19A4Q96LR4 140 aa12.46□□□□□ -0.41
TPM4-206ENST00000587201 WFDC1Q9HC57 220 aa12.46□□□□□ -0.41
TPM4-206ENST00000587201 KLLNB2CW77 178 aa12.45□□□□□ -0.42
TPM4-206ENST00000587201 RNASE4P34096 147 aaKnown RBP12.45□□□□□ -0.42
TPM4-206ENST00000587201 TAS2R45P59539 299 aa12.45□□□□□ -0.42
TPM4-206ENST00000587201 UBE2L3P68036 154 aaKnown RBP12.45□□□□□ -0.42
TPM4-206ENST00000587201 BTN1A1Q13410 526 aa12.45□□□□□ -0.42
TPM4-206ENST00000587201 RNF212Q495C1 297 aa12.45□□□□□ -0.42
TPM4-206ENST00000587201 KHDC3LQ587J8 217 aa12.45□□□□□ -0.42
TPM4-206ENST00000587201 ZNF503Q96F45 646 aa12.45□□□□□ -0.42
TPM4-206ENST00000587201 VGLL1Q99990 258 aa12.45□□□□□ -0.42
TPM4-206ENST00000587201 MED28Q9H204 178 aa12.45□□□□□ -0.42
TPM4-206ENST00000587201 NUDT3O95989 172 aa12.44□□□□□ -0.42
TPM4-206ENST00000587201 GPX1P07203 203 aa12.44□□□□□ -0.42
TPM4-206ENST00000587201 CSN1S1P47710 185 aa12.44□□□□□ -0.42
TPM4-206ENST00000587201 RANP62826 216 aaKnown RBP12.44□□□□□ -0.42
TPM4-206ENST00000587201 CD300CQ08708 224 aa12.44□□□□□ -0.42
TPM4-206ENST00000587201 IGLV2-18A0A075B6J9 118 aa12.43□□□□□ -0.42
TPM4-206ENST00000587201 GAGE12BA1L429 117 aa12.43□□□□□ -0.42
TPM4-206ENST00000587201 EIF3GO75821 320 aaKnown RBP eCLIP12.43□□□□□ -0.42
TPM4-206ENST00000587201 GAGE7O76087 117 aa12.43□□□□□ -0.42
TPM4-206ENST00000587201 GAGE12FP0CL80 117 aa12.43□□□□□ -0.42
TPM4-206ENST00000587201 GAGE12GP0CL81 117 aa12.43□□□□□ -0.42
TPM4-206ENST00000587201 GAGE12IP0CL82 117 aa12.43□□□□□ -0.42
TPM4-206ENST00000587201 CRISP2P16562 243 aa12.43□□□□□ -0.42
TPM4-206ENST00000587201 ACOT6Q3I5F7 207 aaPredicted RBP12.43□□□□□ -0.42
TPM4-206ENST00000587201 LYPD1Q8N2G4 141 aa12.43□□□□□ -0.42
TPM4-206ENST00000587201 ATG101Q9BSB4 218 aa12.43□□□□□ -0.42
TPM4-206ENST00000587201 Q9H3A6 140 aa12.43□□□□□ -0.42
TPM4-206ENST00000587201 ZNF492Q9P255 531 aa12.43□□□□□ -0.42
TPM4-206ENST00000587201 ZNF324O75467 553 aaPredicted RBP12.42□□□□□ -0.42
TPM4-206ENST00000587201 OR5I1Q13606 314 aa12.42□□□□□ -0.42
TPM4-206ENST00000587201 LGALS9BQ3B8N2 356 aa12.42□□□□□ -0.42
TPM4-206ENST00000587201 LINC00612Q8N6U2 182 aa12.42□□□□□ -0.42
TPM4-206ENST00000587201 ZNF680Q8NEM1 530 aa12.42□□□□□ -0.42
TPM4-206ENST00000587201 A0A1W2PPV4 95 aa12.41□□□□□ -0.42
TPM4-206ENST00000587201 NMBP08949 121 aa12.41□□□□□ -0.42
TPM4-206ENST00000587201 M6PRP20645 277 aa12.41□□□□□ -0.42
TPM4-206ENST00000587201 ZNF138P52744 262 aa12.41□□□□□ -0.42
TPM4-206ENST00000587201 LINC00336Q6ZUF6 198 aa12.41□□□□□ -0.42
TPM4-206ENST00000587201 EIF4E3Q8N5X7 224 aaKnown RBP12.41□□□□□ -0.42
TPM4-206ENST00000587201 ZFAND2AQ8N6M9 145 aa12.41□□□□□ -0.42
TPM4-206ENST00000587201 LINC00467Q9BRT7 94 aa12.41□□□□□ -0.42
TPM4-206ENST00000587201 RBAKDNA6NC62 111 aa12.4□□□□□ -0.42
TPM4-206ENST00000587201 RGS13O14921 159 aa12.4□□□□□ -0.42
TPM4-206ENST00000587201 RAB2AP61019 212 aa12.4□□□□□ -0.42
TPM4-206ENST00000587201 DAZ2Q13117 558 aaKnown RBP12.4□□□□□ -0.42
TPM4-206ENST00000587201 ZNF266Q14584 549 aa12.4□□□□□ -0.42
TPM4-206ENST00000587201 ANXA2RQ3ZCQ2 193 aa12.4□□□□□ -0.42
TPM4-206ENST00000587201 PRR9Q5T870 116 aa12.4□□□□□ -0.42
TPM4-206ENST00000587201 Q8TAT8 98 aa12.4□□□□□ -0.42
TPM4-206ENST00000587201 GSN-AS1Q9NRJ2 163 aa12.4□□□□□ -0.42
TPM4-206ENST00000587201 PQLC2Q6ZP29 291 aa12.39□□□□□ -0.43
TPM4-206ENST00000587201 Q6ZTI0 123 aa12.39□□□□□ -0.43
TPM4-206ENST00000587201 HSD17B11Q8NBQ5 300 aa12.39□□□□□ -0.43
TPM4-206ENST00000587201 OR10G4Q8NGN3 311 aa12.39□□□□□ -0.43
TPM4-206ENST00000587201 OR10G9Q8NGN4 311 aa12.39□□□□□ -0.43
TPM4-206ENST00000587201 OR10G7Q8NGN6 311 aa12.39□□□□□ -0.43
TPM4-206ENST00000587201 RXFP4Q8TDU9 374 aa12.39□□□□□ -0.43
TPM4-206ENST00000587201 HYLS1Q96M11 299 aa12.39□□□□□ -0.43
TPM4-206ENST00000587201 AQP10Q96PS8 301 aa12.39□□□□□ -0.43
TPM4-206ENST00000587201 HECTD4Q9Y4D8 3996 aa12.38□□□□□ -0.43
TPM4-206ENST00000587201 TRBV7-9A0A0J9YWB2 115 aa12.38□□□□□ -0.43
TPM4-206ENST00000587201 DIRC3C9JPN6 131 aa12.38□□□□□ -0.43
TPM4-206ENST00000587201 FAM3BP58499 235 aaPredicted RBP12.38□□□□□ -0.43
TPM4-206ENST00000587201 FAM74A1Q5RGS3 127 aa12.38□□□□□ -0.43
TPM4-206ENST00000587201 C11orf72Q8NBR9 251 aa12.38□□□□□ -0.43
TPM4-206ENST00000587201 CMTM2Q8TAZ6 248 aa12.38□□□□□ -0.43
TPM4-206ENST00000587201 GNPNAT1Q96EK6 184 aaPredicted RBP12.38□□□□□ -0.43
TPM4-206ENST00000587201 TRGV2A0A075B6R0 118 aa12.37□□□□□ -0.43
TPM4-206ENST00000587201 IGHV1OR15-1A0A075B7D0 117 aa12.37□□□□□ -0.43
TPM4-206ENST00000587201 TRAV26-1A0A087WT03 109 aa12.37□□□□□ -0.43
TPM4-206ENST00000587201 TRGV1A0A0A0MS02 117 aa12.37□□□□□ -0.43
TPM4-206ENST00000587201 A0A0J9YY99 117 aa12.37□□□□□ -0.43
TPM4-206ENST00000587201 PGPA6NDG6 321 aa12.37□□□□□ -0.43
TPM4-206ENST00000587201 HMGB3O15347 200 aaKnown RBP12.37□□□□□ -0.43
TPM4-206ENST00000587201 GIPP09681 153 aaPredicted RBP12.37□□□□□ -0.43
TPM4-206ENST00000587201 CCL18P55774 89 aa12.37□□□□□ -0.43
TPM4-206ENST00000587201 Q5BKY6 102 aa12.37□□□□□ -0.43
TPM4-206ENST00000587201 Q6ZQT7 251 aa12.37□□□□□ -0.43
TPM4-206ENST00000587201 ARPC5LQ9BPX5 153 aa12.37□□□□□ -0.43
TPM4-206ENST00000587201 TMPRSS5Q9H3S3 457 aa12.37□□□□□ -0.43
TPM4-206ENST00000587201 OTORQ9NRC9 128 aa12.37□□□□□ -0.43
TPM4-206ENST00000587201 TP53TG3Q9ULZ0 132 aa12.37□□□□□ -0.43
TPM4-206ENST00000587201 RPH3ALQ9UNE2 315 aa12.37□□□□□ -0.43
TPM4-206ENST00000587201 KLF12Q9Y4X4 402 aa12.37□□□□□ -0.43
TPM4-206ENST00000587201 DNAH2Q9P225 4427 aa12.36□□□□□ -0.43
TPM4-206ENST00000587201 HOXA5P20719 270 aa12.36□□□□□ -0.43
TPM4-206ENST00000587201 CDC34P49427 236 aaPredicted RBP12.36□□□□□ -0.43
TPM4-206ENST00000587201 IBA57Q5T440 356 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms