RNA–Protein interactions for RNA: ENST00000586407.1

LIG3-208, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-208ENST00000586407 F5H768 121 aa19.8■□□□□ 0.76
LIG3-208ENST00000586407 UBE2L3P68036 154 aaKnown RBP19.8■□□□□ 0.76
LIG3-208ENST00000586407 ZNF493Q6ZR52 646 aa19.8■□□□□ 0.76
LIG3-208ENST00000586407 FAM19A4Q96LR4 140 aa19.8■□□□□ 0.76
LIG3-208ENST00000586407 FRAS1Q86XX4 4008 aa19.8■□□□□ 0.76
LIG3-208ENST00000586407 NACAE9PAV3 2078 aa19.8■□□□□ 0.76
LIG3-208ENST00000586407 Q5BKY6 102 aa19.79■□□□□ 0.76
LIG3-208ENST00000586407 UBE2DNLQ8IWF7 75 aa19.79■□□□□ 0.76
LIG3-208ENST00000586407 CCDC28AQ8IWP9 274 aa19.79■□□□□ 0.76
LIG3-208ENST00000586407 LINC00477Q96M19 166 aa19.79■□□□□ 0.76
LIG3-208ENST00000586407 C7orf71A4D174 169 aa19.78■□□□□ 0.76
LIG3-208ENST00000586407 SLC25A5P05141 298 aaKnown RBP19.78■□□□□ 0.76
LIG3-208ENST00000586407 RAB2AP61019 212 aa19.78■□□□□ 0.76
LIG3-208ENST00000586407 RANP62826 216 aaKnown RBP19.78■□□□□ 0.76
LIG3-208ENST00000586407 PRR9Q5T870 116 aa19.78■□□□□ 0.76
LIG3-208ENST00000586407 KLLNB2CW77 178 aa19.77■□□□□ 0.76
LIG3-208ENST00000586407 M0R2N4 97 aa19.77■□□□□ 0.76
LIG3-208ENST00000586407 ATP5G1P05496 136 aa19.77■□□□□ 0.76
LIG3-208ENST00000586407 RNASE4P34096 147 aaKnown RBP19.77■□□□□ 0.76
LIG3-208ENST00000586407 ATP5G3P48201 142 aa19.77■□□□□ 0.76
LIG3-208ENST00000586407 Q6ZQT7 251 aa19.77■□□□□ 0.76
LIG3-208ENST00000586407 C9orf47Q6ZRZ4 202 aa19.77■□□□□ 0.76
LIG3-208ENST00000586407 Q8TAT8 98 aa19.77■□□□□ 0.76
LIG3-208ENST00000586407 Q9H3A6 140 aa19.77■□□□□ 0.76
LIG3-208ENST00000586407 CBY3A6NI87 242 aa19.76■□□□□ 0.75
LIG3-208ENST00000586407 KHDC3LQ587J8 217 aa19.76■□□□□ 0.75
LIG3-208ENST00000586407 TMEM78Q5T7P6 136 aa19.75■□□□□ 0.75
LIG3-208ENST00000586407 ZFAND2AQ8N6M9 145 aa19.75■□□□□ 0.75
LIG3-208ENST00000586407 PYGO2Q9BRQ0 406 aa19.75■□□□□ 0.75
LIG3-208ENST00000586407 GAGE12BA1L429 117 aa19.74■□□□□ 0.75
LIG3-208ENST00000586407 HMGB3O15347 200 aaKnown RBP19.74■□□□□ 0.75
LIG3-208ENST00000586407 GAGE7O76087 117 aa19.74■□□□□ 0.75
LIG3-208ENST00000586407 GAGE12FP0CL80 117 aa19.74■□□□□ 0.75
LIG3-208ENST00000586407 GAGE12GP0CL81 117 aa19.74■□□□□ 0.75
LIG3-208ENST00000586407 GAGE12IP0CL82 117 aa19.74■□□□□ 0.75
LIG3-208ENST00000586407 HSD17B11Q8NBQ5 300 aa19.74■□□□□ 0.75
LIG3-208ENST00000586407 IGLV2-18A0A075B6J9 118 aa19.73■□□□□ 0.75
LIG3-208ENST00000586407 SNURFLB1AK76 121 aa19.73■□□□□ 0.75
LIG3-208ENST00000586407 ZNF324O75467 553 aaPredicted RBP19.73■□□□□ 0.75
LIG3-208ENST00000586407 GPX1P07203 203 aa19.73■□□□□ 0.75
LIG3-208ENST00000586407 CRISP2P16562 243 aa19.73■□□□□ 0.75
LIG3-208ENST00000586407 TAS2R45P59539 299 aa19.73■□□□□ 0.75
LIG3-208ENST00000586407 ACOT6Q3I5F7 207 aaPredicted RBP19.73■□□□□ 0.75
LIG3-208ENST00000586407 ZNF492Q9P255 531 aa19.73■□□□□ 0.75
LIG3-208ENST00000586407 LINC00612Q8N6U2 182 aa19.72■□□□□ 0.75
LIG3-208ENST00000586407 GSN-AS1Q9NRJ2 163 aa19.72■□□□□ 0.75
LIG3-208ENST00000586407 NUDT3O95989 172 aa19.71■□□□□ 0.75
LIG3-208ENST00000586407 M6PRP20645 277 aa19.71■□□□□ 0.75
LIG3-208ENST00000586407 ZNF138P52744 262 aa19.71■□□□□ 0.75
LIG3-208ENST00000586407 HYLS1Q96M11 299 aa19.71■□□□□ 0.75
LIG3-208ENST00000586407 AQP10Q96PS8 301 aa19.71■□□□□ 0.75
LIG3-208ENST00000586407 CSN1S1P47710 185 aa19.7■□□□□ 0.74
LIG3-208ENST00000586407 Q6ZTI0 123 aa19.7■□□□□ 0.74
LIG3-208ENST00000586407 C15orf53Q8NAA6 179 aa19.7■□□□□ 0.74
LIG3-208ENST00000586407 RPH3ALQ9UNE2 315 aa19.7■□□□□ 0.74
LIG3-208ENST00000586407 A0A1W2PPV4 95 aa19.69■□□□□ 0.74
LIG3-208ENST00000586407 GIPP09681 153 aaPredicted RBP19.69■□□□□ 0.74
LIG3-208ENST00000586407 C11orf72Q8NBR9 251 aa19.69■□□□□ 0.74
LIG3-208ENST00000586407 OR10G4Q8NGN3 311 aa19.69■□□□□ 0.74
LIG3-208ENST00000586407 OR10G9Q8NGN4 311 aa19.69■□□□□ 0.74
LIG3-208ENST00000586407 OR10G7Q8NGN6 311 aa19.69■□□□□ 0.74
LIG3-208ENST00000586407 TP53TG3Q9ULZ0 132 aa19.69■□□□□ 0.74
LIG3-208ENST00000586407 OR5I1Q13606 314 aa19.68■□□□□ 0.74
LIG3-208ENST00000586407 LYPD1Q8N2G4 141 aa19.68■□□□□ 0.74
LIG3-208ENST00000586407 EIF4E3Q8N5X7 224 aaKnown RBP19.68■□□□□ 0.74
LIG3-208ENST00000586407 DIRC3C9JPN6 131 aa19.67■□□□□ 0.74
LIG3-208ENST00000586407 HOXA5P20719 270 aa19.67■□□□□ 0.74
LIG3-208ENST00000586407 ATP6V0CP27449 155 aa19.67■□□□□ 0.74
LIG3-208ENST00000586407 SH3BGRL3Q9H299 93 aa19.67■□□□□ 0.74
LIG3-208ENST00000586407 KLF12Q9Y4X4 402 aa19.67■□□□□ 0.74
LIG3-208ENST00000586407 FXYD6-FXYD2A0A087WZ82 144 aa19.66■□□□□ 0.74
LIG3-208ENST00000586407 RGS13O14921 159 aa19.66■□□□□ 0.74
LIG3-208ENST00000586407 ZNF266Q14584 549 aa19.66■□□□□ 0.74
LIG3-208ENST00000586407 RNF212Q495C1 297 aa19.66■□□□□ 0.74
LIG3-208ENST00000586407 TMPRSS5Q9H3S3 457 aa19.66■□□□□ 0.74
LIG3-208ENST00000586407 PGPA6NDG6 321 aa19.65■□□□□ 0.74
LIG3-208ENST00000586407 NMBP08949 121 aa19.65■□□□□ 0.74
LIG3-208ENST00000586407 DAZ2Q13117 558 aaKnown RBP19.65■□□□□ 0.74
LIG3-208ENST00000586407 RGS21Q2M5E4 152 aa19.65■□□□□ 0.74
LIG3-208ENST00000586407 ZNF680Q8NEM1 530 aa19.65■□□□□ 0.74
LIG3-208ENST00000586407 LINC00467Q9BRT7 94 aa19.65■□□□□ 0.74
LIG3-208ENST00000586407 OTORQ9NRC9 128 aa19.65■□□□□ 0.74
LIG3-208ENST00000586407 A0A0J9YY99 117 aa19.64■□□□□ 0.73
LIG3-208ENST00000586407 RBAKDNA6NC62 111 aa19.64■□□□□ 0.73
LIG3-208ENST00000586407 RNF222A6NCQ9 220 aa19.64■□□□□ 0.73
LIG3-208ENST00000586407 ARL14EPLP0DKL9 152 aa19.64■□□□□ 0.73
LIG3-208ENST00000586407 CDC34P49427 236 aaPredicted RBP19.64■□□□□ 0.73
LIG3-208ENST00000586407 ANXA2RQ3ZCQ2 193 aa19.64■□□□□ 0.73
LIG3-208ENST00000586407 PQLC2Q6ZP29 291 aa19.64■□□□□ 0.73
LIG3-208ENST00000586407 ATG101Q9BSB4 218 aa19.64■□□□□ 0.73
LIG3-208ENST00000586407 IGHV1OR15-1A0A075B7D0 117 aa19.63■□□□□ 0.73
LIG3-208ENST00000586407 TRAV26-1A0A087WT03 109 aa19.63■□□□□ 0.73
LIG3-208ENST00000586407 GNG5P63218 68 aa19.63■□□□□ 0.73
LIG3-208ENST00000586407 MUC21Q5SSG8 566 aa19.63■□□□□ 0.73
LIG3-208ENST00000586407 OR2G3Q8NGZ4 309 aa19.63■□□□□ 0.73
LIG3-208ENST00000586407 TRGV1A0A0A0MS02 117 aa19.62■□□□□ 0.73
LIG3-208ENST00000586407 RPL7L1Q6DKI1 246 aaKnown RBP19.62■□□□□ 0.73
LIG3-208ENST00000586407 OR2T35Q8NGX2 323 aa19.62■□□□□ 0.73
LIG3-208ENST00000586407 CMTM2Q8TAZ6 248 aa19.62■□□□□ 0.73
LIG3-208ENST00000586407 RXFP4Q8TDU9 374 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms