RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 FRAS1Q86XX4 4008 aa12.58□□□□□ -0.4
SRSF1-209ENST00000585096 OR7C2O60412 319 aa12.57□□□□□ -0.4
SRSF1-209ENST00000585096 OR10J4P0C629 311 aa12.57□□□□□ -0.4
SRSF1-209ENST00000585096 FAM3BP58499 235 aaPredicted RBP12.57□□□□□ -0.4
SRSF1-209ENST00000585096 FFAR4Q5NUL3 377 aa12.57□□□□□ -0.4
SRSF1-209ENST00000585096 TMEM78Q5T7P6 136 aa12.57□□□□□ -0.4
SRSF1-209ENST00000585096 C9orf47Q6ZRZ4 202 aa12.57□□□□□ -0.4
SRSF1-209ENST00000585096 FAM19A4Q96LR4 140 aa12.57□□□□□ -0.4
SRSF1-209ENST00000585096 ATG101Q9BSB4 218 aa12.57□□□□□ -0.4
SRSF1-209ENST00000585096 DNAH6Q9C0G6 4158 aa12.56□□□□□ -0.4
SRSF1-209ENST00000585096 KLLNB2CW77 178 aa12.56□□□□□ -0.4
SRSF1-209ENST00000585096 NUDT3O95989 172 aa12.56□□□□□ -0.4
SRSF1-209ENST00000585096 GPX1P07203 203 aa12.56□□□□□ -0.4
SRSF1-209ENST00000585096 NMBP08949 121 aa12.56□□□□□ -0.4
SRSF1-209ENST00000585096 TAS2R45P59539 299 aa12.56□□□□□ -0.4
SRSF1-209ENST00000585096 IGLV2-18A0A075B6J9 118 aa12.55□□□□□ -0.4
SRSF1-209ENST00000585096 IGKV2-40A0A087WW87 121 aaPredicted RBP12.55□□□□□ -0.4
SRSF1-209ENST00000585096 IGKV2D-40P01614 121 aaPredicted RBP12.55□□□□□ -0.4
SRSF1-209ENST00000585096 CRISP2P16562 243 aa12.55□□□□□ -0.4
SRSF1-209ENST00000585096 RNASE4P34096 147 aaKnown RBP12.55□□□□□ -0.4
SRSF1-209ENST00000585096 CSN1S1P47710 185 aa12.55□□□□□ -0.4
SRSF1-209ENST00000585096 LYPD1Q8N2G4 141 aa12.55□□□□□ -0.4
SRSF1-209ENST00000585096 LINC00612Q8N6U2 182 aa12.55□□□□□ -0.4
SRSF1-209ENST00000585096 ZNF680Q8NEM1 530 aa12.55□□□□□ -0.4
SRSF1-209ENST00000585096 ALG5Q9Y673 324 aa12.55□□□□□ -0.4
SRSF1-209ENST00000585096 GAGE12BA1L429 117 aa12.54□□□□□ -0.4
SRSF1-209ENST00000585096 ZNF324O75467 553 aaPredicted RBP12.54□□□□□ -0.4
SRSF1-209ENST00000585096 GAGE7O76087 117 aa12.54□□□□□ -0.4
SRSF1-209ENST00000585096 PTTG1O95997 202 aa12.54□□□□□ -0.4
SRSF1-209ENST00000585096 GAGE12FP0CL80 117 aa12.54□□□□□ -0.4
SRSF1-209ENST00000585096 GAGE12GP0CL81 117 aa12.54□□□□□ -0.4
SRSF1-209ENST00000585096 GAGE12IP0CL82 117 aa12.54□□□□□ -0.4
SRSF1-209ENST00000585096 RANP62826 216 aaKnown RBP12.54□□□□□ -0.4
SRSF1-209ENST00000585096 UBE2L3P68036 154 aaKnown RBP12.54□□□□□ -0.4
SRSF1-209ENST00000585096 CD300CQ08708 224 aa12.54□□□□□ -0.4
SRSF1-209ENST00000585096 DAZ2Q13117 558 aaKnown RBP12.54□□□□□ -0.4
SRSF1-209ENST00000585096 BTN1A1Q13410 526 aa12.54□□□□□ -0.4
SRSF1-209ENST00000585096 KHDC3LQ587J8 217 aa12.54□□□□□ -0.4
SRSF1-209ENST00000585096 PHYHIPLQ96FC7 376 aa12.54□□□□□ -0.4
SRSF1-209ENST00000585096 VGLL1Q99990 258 aa12.54□□□□□ -0.4
SRSF1-209ENST00000585096 LINC00467Q9BRT7 94 aa12.54□□□□□ -0.4
SRSF1-209ENST00000585096 ZNF138P52744 262 aa12.53□□□□□ -0.4
SRSF1-209ENST00000585096 OR5I1Q13606 314 aa12.53□□□□□ -0.4
SRSF1-209ENST00000585096 EIF4E3Q8N5X7 224 aaKnown RBP12.53□□□□□ -0.4
SRSF1-209ENST00000585096 ZNF492Q9P255 531 aa12.53□□□□□ -0.4
SRSF1-209ENST00000585096 TRBV7-9A0A0J9YWB2 115 aa12.52□□□□□ -0.41
SRSF1-209ENST00000585096 M6PRP20645 277 aa12.52□□□□□ -0.41
SRSF1-209ENST00000585096 CCL18P55774 89 aa12.52□□□□□ -0.41
SRSF1-209ENST00000585096 ACOT6Q3I5F7 207 aaPredicted RBP12.52□□□□□ -0.41
SRSF1-209ENST00000585096 ANXA2RQ3ZCQ2 193 aa12.52□□□□□ -0.41
SRSF1-209ENST00000585096 SOHLH1Q5JUK2 328 aa12.52□□□□□ -0.41
SRSF1-209ENST00000585096 Q6ZR54 194 aa12.52□□□□□ -0.41
SRSF1-209ENST00000585096 ZNF503Q96F45 646 aa12.52□□□□□ -0.41
SRSF1-209ENST00000585096 Q9H3A6 140 aa12.52□□□□□ -0.41
SRSF1-209ENST00000585096 WFDC1Q9HC57 220 aa12.52□□□□□ -0.41
SRSF1-209ENST00000585096 GSN-AS1Q9NRJ2 163 aa12.52□□□□□ -0.41
SRSF1-209ENST00000585096 RBAKDNA6NC62 111 aa12.51□□□□□ -0.41
SRSF1-209ENST00000585096 RGS13O14921 159 aa12.51□□□□□ -0.41
SRSF1-209ENST00000585096 ZFAND2AQ8N6M9 145 aa12.51□□□□□ -0.41
SRSF1-209ENST00000585096 RXFP4Q8TDU9 374 aa12.51□□□□□ -0.41
SRSF1-209ENST00000585096 GNPNAT1Q96EK6 184 aaPredicted RBP12.51□□□□□ -0.41
SRSF1-209ENST00000585096 MED28Q9H204 178 aa12.51□□□□□ -0.41
SRSF1-209ENST00000585096 TRAV26-1A0A087WT03 109 aa12.5□□□□□ -0.41
SRSF1-209ENST00000585096 A0A1W2PPV4 95 aa12.5□□□□□ -0.41
SRSF1-209ENST00000585096 PRSS29PA6NIE9 313 aa12.5□□□□□ -0.41
SRSF1-209ENST00000585096 RTL8CO15255 209 aa12.5□□□□□ -0.41
SRSF1-209ENST00000585096 Q6ZTI0 123 aa12.5□□□□□ -0.41
SRSF1-209ENST00000585096 C11orf72Q8NBR9 251 aa12.5□□□□□ -0.41
SRSF1-209ENST00000585096 TRGV2A0A075B6R0 118 aa12.49□□□□□ -0.41
SRSF1-209ENST00000585096 IGHV1OR15-1A0A075B7D0 117 aa12.49□□□□□ -0.41
SRSF1-209ENST00000585096 ZNF266Q14584 549 aa12.49□□□□□ -0.41
SRSF1-209ENST00000585096 FAM74A1Q5RGS3 127 aa12.49□□□□□ -0.41
SRSF1-209ENST00000585096 Q8TAT8 98 aa12.49□□□□□ -0.41
SRSF1-209ENST00000585096 DNAH2Q9P225 4427 aa12.48□□□□□ -0.41
SRSF1-209ENST00000585096 TRGV1A0A0A0MS02 117 aa12.48□□□□□ -0.41
SRSF1-209ENST00000585096 HOXA5P20719 270 aa12.48□□□□□ -0.41
SRSF1-209ENST00000585096 IBA57Q5T440 356 aaKnown RBP12.48□□□□□ -0.41
SRSF1-209ENST00000585096 PRR9Q5T870 116 aa12.48□□□□□ -0.41
SRSF1-209ENST00000585096 PQLC2Q6ZP29 291 aa12.48□□□□□ -0.41
SRSF1-209ENST00000585096 CMTM2Q8TAZ6 248 aa12.48□□□□□ -0.41
SRSF1-209ENST00000585096 C18orf15Q96N68 181 aa12.48□□□□□ -0.41
SRSF1-209ENST00000585096 ARPC5LQ9BPX5 153 aa12.48□□□□□ -0.41
SRSF1-209ENST00000585096 OTORQ9NRC9 128 aa12.48□□□□□ -0.41
SRSF1-209ENST00000585096 HECTD4Q9Y4D8 3996 aa12.47□□□□□ -0.41
SRSF1-209ENST00000585096 A0A0J9YY99 117 aa12.47□□□□□ -0.41
SRSF1-209ENST00000585096 DIRC3C9JPN6 131 aa12.47□□□□□ -0.41
SRSF1-209ENST00000585096 H3BNG1 76 aa12.47□□□□□ -0.41
SRSF1-209ENST00000585096 TCL1AP56279 114 aa12.47□□□□□ -0.41
SRSF1-209ENST00000585096 RAB2AP61019 212 aa12.47□□□□□ -0.41
SRSF1-209ENST00000585096 C1orf134Q5TEV5 83 aa12.47□□□□□ -0.41
SRSF1-209ENST00000585096 OR10G4Q8NGN3 311 aa12.47□□□□□ -0.41
SRSF1-209ENST00000585096 OR10G9Q8NGN4 311 aa12.47□□□□□ -0.41
SRSF1-209ENST00000585096 OR10G7Q8NGN6 311 aa12.47□□□□□ -0.41
SRSF1-209ENST00000585096 ZNRF2Q8NHG8 242 aa12.47□□□□□ -0.41
SRSF1-209ENST00000585096 ASB13Q8WXK3 278 aa12.47□□□□□ -0.41
SRSF1-209ENST00000585096 HYLS1Q96M11 299 aa12.47□□□□□ -0.41
SRSF1-209ENST00000585096 TMPRSS5Q9H3S3 457 aa12.47□□□□□ -0.41
SRSF1-209ENST00000585096 LINC00588Q9Y4M8 146 aa12.47□□□□□ -0.41
SRSF1-209ENST00000585096 LENEPQ9Y5L5 61 aa12.47□□□□□ -0.41
SRSF1-209ENST00000585096 PGPA6NDG6 321 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 192.6 ms