RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 LCN15Q6UWW0 184 aa12.61□□□□□ -0.39
TOP3A-220ENST00000585031 SLC25A22Q9H936 323 aa12.61□□□□□ -0.39
TOP3A-220ENST00000585031 SLC45A2Q9UMX9 530 aa12.61□□□□□ -0.39
TOP3A-220ENST00000585031 RBFOX3A6NFN3 312 aa12.6□□□□□ -0.39
TOP3A-220ENST00000585031 BTF3P20290 206 aaKnown RBP12.6□□□□□ -0.39
TOP3A-220ENST00000585031 OR10J1P30954 320 aa12.6□□□□□ -0.39
TOP3A-220ENST00000585031 TAGLN2P37802 199 aaKnown RBP12.6□□□□□ -0.39
TOP3A-220ENST00000585031 PPT1P50897 306 aa12.6□□□□□ -0.39
TOP3A-220ENST00000585031 SELENOTP62341 195 aa12.6□□□□□ -0.39
TOP3A-220ENST00000585031 ZNF726P1Q15940 193 aa12.6□□□□□ -0.39
TOP3A-220ENST00000585031 Q5VSD8 79 aa12.6□□□□□ -0.39
TOP3A-220ENST00000585031 CYP2G1PQ6ZSU1 146 aa12.6□□□□□ -0.39
TOP3A-220ENST00000585031 CCDC28AQ8IWP9 274 aa12.6□□□□□ -0.39
TOP3A-220ENST00000585031 THAP8Q8NA92 274 aa12.6□□□□□ -0.39
TOP3A-220ENST00000585031 C18orf15Q96N68 181 aa12.6□□□□□ -0.39
TOP3A-220ENST00000585031 SAV1Q9H4B6 383 aaPredicted RBP12.6□□□□□ -0.39
TOP3A-220ENST00000585031 BUB3O43684 328 aa12.59□□□□□ -0.39
TOP3A-220ENST00000585031 NUDT3O95989 172 aa12.59□□□□□ -0.39
TOP3A-220ENST00000585031 IGLC1P0CG04 106 aa12.59□□□□□ -0.39
TOP3A-220ENST00000585031 RND2P52198 227 aa12.59□□□□□ -0.39
TOP3A-220ENST00000585031 RHOBP62745 196 aa12.59□□□□□ -0.39
TOP3A-220ENST00000585031 SIGLEC15Q6ZMC9 328 aa12.59□□□□□ -0.39
TOP3A-220ENST00000585031 NPIPB3Q92617 1050 aa12.59□□□□□ -0.39
TOP3A-220ENST00000585031 RAB24Q969Q5 203 aa12.59□□□□□ -0.39
TOP3A-220ENST00000585031 ZFP92A6NM28 416 aa12.58□□□□□ -0.4
TOP3A-220ENST00000585031 F6UB75 175 aa12.58□□□□□ -0.4
TOP3A-220ENST00000585031 F8W036 122 aa12.58□□□□□ -0.4
TOP3A-220ENST00000585031 ZNF506Q5JVG8 444 aa12.58□□□□□ -0.4
TOP3A-220ENST00000585031 OR4B1Q8NGF8 309 aa12.58□□□□□ -0.4
TOP3A-220ENST00000585031 GNG13Q9P2W3 67 aa12.58□□□□□ -0.4
TOP3A-220ENST00000585031 HMCN2Q8NDA2 5059 aa12.57□□□□□ -0.4
TOP3A-220ENST00000585031 FABP1P07148 127 aa12.57□□□□□ -0.4
TOP3A-220ENST00000585031 SFTA3P0C7M3 94 aa12.57□□□□□ -0.4
TOP3A-220ENST00000585031 CCL20P78556 96 aa12.57□□□□□ -0.4
TOP3A-220ENST00000585031 SRSF3P84103 164 aaKnown RBP12.57□□□□□ -0.4
TOP3A-220ENST00000585031 RRN3P1Q2M238 152 aa12.57□□□□□ -0.4
TOP3A-220ENST00000585031 KHDC3LQ587J8 217 aa12.57□□□□□ -0.4
TOP3A-220ENST00000585031 OR1L4Q8NGR5 311 aa12.57□□□□□ -0.4
TOP3A-220ENST00000585031 CLUHP3Q96NS8 147 aa12.57□□□□□ -0.4
TOP3A-220ENST00000585031 TRGV9Q99603 122 aa12.57□□□□□ -0.4
TOP3A-220ENST00000585031 SEC11CQ9BY50 192 aa12.57□□□□□ -0.4
TOP3A-220ENST00000585031 MANBALQ9NQG1 85 aa12.57□□□□□ -0.4
TOP3A-220ENST00000585031 SCGB2A1O75556 95 aa12.56□□□□□ -0.4
TOP3A-220ENST00000585031 APOC3P02656 99 aa12.56□□□□□ -0.4
TOP3A-220ENST00000585031 LINC00869P0C866 280 aa12.56□□□□□ -0.4
TOP3A-220ENST00000585031 BCL2P10415 239 aa12.56□□□□□ -0.4
TOP3A-220ENST00000585031 PSMB3P49720 205 aa12.56□□□□□ -0.4
TOP3A-220ENST00000585031 FGF8P55075 233 aaPredicted RBP12.56□□□□□ -0.4
TOP3A-220ENST00000585031 FOXI2Q6ZQN5 318 aa12.56□□□□□ -0.4
TOP3A-220ENST00000585031 SSX7Q7RTT5 188 aa12.56□□□□□ -0.4
TOP3A-220ENST00000585031 Q8WTZ3 238 aa12.56□□□□□ -0.4
TOP3A-220ENST00000585031 PFDN5Q99471 154 aa12.56□□□□□ -0.4
TOP3A-220ENST00000585031 Q9H8V8 135 aa12.56□□□□□ -0.4
TOP3A-220ENST00000585031 CARHSP1Q9Y2V2 147 aaKnown RBP12.56□□□□□ -0.4
TOP3A-220ENST00000585031 GOLT1BQ9Y3E0 138 aa12.56□□□□□ -0.4
TOP3A-220ENST00000585031 IGKV1OR2-108A0A075B7D4 117 aa12.55□□□□□ -0.4
TOP3A-220ENST00000585031 SOCS3O14543 225 aa12.55□□□□□ -0.4
TOP3A-220ENST00000585031 CXorf1O96002 111 aa12.55□□□□□ -0.4
TOP3A-220ENST00000585031 IL4P05112 153 aa12.55□□□□□ -0.4
TOP3A-220ENST00000585031 YPEL3P61236 119 aaPredicted RBP12.55□□□□□ -0.4
TOP3A-220ENST00000585031 FAM78BQ5VT40 261 aa12.55□□□□□ -0.4
TOP3A-220ENST00000585031 IQCF2Q8IXL9 164 aa12.55□□□□□ -0.4
TOP3A-220ENST00000585031 FRZBQ92765 325 aa12.55□□□□□ -0.4
TOP3A-220ENST00000585031 MRPL32Q9BYC8 188 aaKnown RBP12.55□□□□□ -0.4
TOP3A-220ENST00000585031 MDFICQ9P1T7 246 aa12.55□□□□□ -0.4
TOP3A-220ENST00000585031 VAX2Q9UIW0 290 aa12.55□□□□□ -0.4
TOP3A-220ENST00000585031 DNAH8Q96JB1 4490 aa12.54□□□□□ -0.4
TOP3A-220ENST00000585031 TRAV30A0A087WSZ9 112 aa12.54□□□□□ -0.4
TOP3A-220ENST00000585031 PLAC8L1A1L4L8 177 aa12.54□□□□□ -0.4
TOP3A-220ENST00000585031 ZNF705GA8MUZ8 300 aaPredicted RBP12.54□□□□□ -0.4
TOP3A-220ENST00000585031 F5H768 121 aa12.54□□□□□ -0.4
TOP3A-220ENST00000585031 COX7A2P2O60397 106 aa12.54□□□□□ -0.4
TOP3A-220ENST00000585031 DEFB130BP0DP73 79 aa12.54□□□□□ -0.4
TOP3A-220ENST00000585031 DEFB130AP0DP74 79 aa12.54□□□□□ -0.4
TOP3A-220ENST00000585031 CCL18P55774 89 aa12.54□□□□□ -0.4
TOP3A-220ENST00000585031 TAS2R45P59539 299 aa12.54□□□□□ -0.4
TOP3A-220ENST00000585031 PSG9Q00887 426 aa12.54□□□□□ -0.4
TOP3A-220ENST00000585031 ICAM4Q14773 271 aa12.54□□□□□ -0.4
TOP3A-220ENST00000585031 GCSAMLQ5JQS6 135 aa12.54□□□□□ -0.4
TOP3A-220ENST00000585031 C10orf91Q5T1B1 145 aa12.54□□□□□ -0.4
TOP3A-220ENST00000585031 SVBPQ8N300 66 aa12.54□□□□□ -0.4
TOP3A-220ENST00000585031 FUT9Q9Y231 359 aa12.54□□□□□ -0.4
TOP3A-220ENST00000585031 IGKV1D-37A0A075B6S9 117 aa12.53□□□□□ -0.4
TOP3A-220ENST00000585031 NDUFS6O75380 124 aaKnown RBP12.53□□□□□ -0.4
TOP3A-220ENST00000585031 OR5G3P0C626 314 aa12.53□□□□□ -0.4
TOP3A-220ENST00000585031 STAG3L2P0CL84 134 aa12.53□□□□□ -0.4
TOP3A-220ENST00000585031 STAG3L3P0CL85 134 aa12.53□□□□□ -0.4
TOP3A-220ENST00000585031 AMTNQ6UX39 209 aa12.53□□□□□ -0.4
TOP3A-220ENST00000585031 RXFP4Q8TDU9 374 aa12.53□□□□□ -0.4
TOP3A-220ENST00000585031 UHRF2Q96PU4 802 aa12.53□□□□□ -0.4
TOP3A-220ENST00000585031 HMGB3O15347 200 aaKnown RBP12.52□□□□□ -0.41
TOP3A-220ENST00000585031 AZU1P20160 251 aa12.52□□□□□ -0.41
TOP3A-220ENST00000585031 C20orf173Q96LM9 149 aa12.52□□□□□ -0.41
TOP3A-220ENST00000585031 Q9H3A6 140 aa12.52□□□□□ -0.41
TOP3A-220ENST00000585031 DNAJC4Q9NNZ3 241 aa12.52□□□□□ -0.41
TOP3A-220ENST00000585031 A0A0J9YX75 114 aa12.51□□□□□ -0.41
TOP3A-220ENST00000585031 LYRM9A8MSI8 78 aa12.51□□□□□ -0.41
TOP3A-220ENST00000585031 C9JQL5 133 aa12.51□□□□□ -0.41
TOP3A-220ENST00000585031 SNAPINO95295 136 aa12.51□□□□□ -0.41
TOP3A-220ENST00000585031 SRP19P09132 144 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms