RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 RGS13O14921 159 aa8.49□□□□□ -1.05
SS18-219ENST00000581570 COX7A2P2O60397 106 aa8.49□□□□□ -1.05
SS18-219ENST00000581570 CCNKO75909 580 aa8.49□□□□□ -1.05
SS18-219ENST00000581570 GHRHP01286 108 aa8.49□□□□□ -1.05
SS18-219ENST00000581570 POLR2GP62487 172 aaKnown RBP eCLIP8.49□□□□□ -1.05
SS18-219ENST00000581570 OPCMLQ14982 345 aa8.49□□□□□ -1.05
SS18-219ENST00000581570 CTF1Q16619 201 aa8.49□□□□□ -1.05
SS18-219ENST00000581570 MORN5Q5VZ52 161 aa8.49□□□□□ -1.05
SS18-219ENST00000581570 TXNDC17Q9BRA2 123 aa8.49□□□□□ -1.05
SS18-219ENST00000581570 CCDC59Q9P031 241 aaKnown RBP8.49□□□□□ -1.05
SS18-219ENST00000581570 IGHV3-38A0A0C4DH36 116 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 IBA57-AS1B1ANH7 110 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 FNDC10F2Z333 226 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 ORM1P02763 201 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 GPX1P07203 203 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 OR4E1P0C645 316 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 SFTA3P0C7M3 94 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 ID3Q02535 119 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 GUK1Q16774 197 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 ZNF546Q86UE3 836 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 IQCF2Q8IXL9 164 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 TMEM37Q8WXS4 190 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 DIRAS2Q96HU8 199 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 FAM19A4Q96LR4 140 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 LINC00477Q96M19 166 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 ARPC5LQ9BPX5 153 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 Q9HAA7 133 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 RABL2AQ9UBK7 228 aaPredicted RBP8.48□□□□□ -1.05
SS18-219ENST00000581570 MGAT4CQ9UBM8 478 aa8.48□□□□□ -1.05
SS18-219ENST00000581570 IGHV1OR15-1A0A075B7D0 117 aa8.47□□□□□ -1.05
SS18-219ENST00000581570 M0R3E3 92 aa8.47□□□□□ -1.05
SS18-219ENST00000581570 AGPAT2O15120 278 aa8.47□□□□□ -1.05
SS18-219ENST00000581570 SFT2D2O95562 160 aa8.47□□□□□ -1.05
SS18-219ENST00000581570 METTL15P1P0C7V9 234 aa8.47□□□□□ -1.05
SS18-219ENST00000581570 C10orf113Q5VZT2 155 aa8.47□□□□□ -1.05
SS18-219ENST00000581570 OR10P1Q8NGE3 313 aa8.47□□□□□ -1.05
SS18-219ENST00000581570 MRPL53Q96EL3 112 aaKnown RBP8.47□□□□□ -1.05
SS18-219ENST00000581570 ZNF479Q96JC4 524 aa8.47□□□□□ -1.05
SS18-219ENST00000581570 SMIM8Q96KF7 97 aa8.47□□□□□ -1.05
SS18-219ENST00000581570 AGPAT4-IT1Q9H0P7 198 aa8.47□□□□□ -1.05
SS18-219ENST00000581570 SSSCA1O60232 199 aa8.46□□□□□ -1.06
SS18-219ENST00000581570 CRISP2P16562 243 aa8.46□□□□□ -1.06
SS18-219ENST00000581570 PPP1R1AQ13522 171 aa8.46□□□□□ -1.06
SS18-219ENST00000581570 LINC01556Q5JQF7 62 aa8.46□□□□□ -1.06
SS18-219ENST00000581570 TMEM14EPQ6UXP3 125 aa8.46□□□□□ -1.06
SS18-219ENST00000581570 BLNKQ8WV28 456 aa8.46□□□□□ -1.06
SS18-219ENST00000581570 DNAJC4Q9NNZ3 241 aa8.46□□□□□ -1.06
SS18-219ENST00000581570 C9JCJ5 164 aa8.45□□□□□ -1.06
SS18-219ENST00000581570 ZNF253O75346 499 aa8.45□□□□□ -1.06
SS18-219ENST00000581570 NMBP08949 121 aa8.45□□□□□ -1.06
SS18-219ENST00000581570 KRTAP10-4P60372 401 aaPredicted RBP8.45□□□□□ -1.06
SS18-219ENST00000581570 Q6ZQT7 251 aa8.45□□□□□ -1.06
SS18-219ENST00000581570 OR10G4Q8NGN3 311 aa8.45□□□□□ -1.06
SS18-219ENST00000581570 SLC25A31Q9H0C2 315 aa8.45□□□□□ -1.06
SS18-219ENST00000581570 RSL24D1Q9UHA3 163 aaKnown RBP8.45□□□□□ -1.06
SS18-219ENST00000581570 FAUP35544 74 aaKnown RBP8.44□□□□□ -1.06
SS18-219ENST00000581570 PPT1P50897 306 aa8.44□□□□□ -1.06
SS18-219ENST00000581570 TIRAPP58753 221 aa8.44□□□□□ -1.06
SS18-219ENST00000581570 WFDC2Q14508 124 aa8.44□□□□□ -1.06
SS18-219ENST00000581570 PRR9Q5T870 116 aa8.44□□□□□ -1.06
SS18-219ENST00000581570 SCXQ7RTU7 201 aa8.44□□□□□ -1.06
SS18-219ENST00000581570 SH2D6Q7Z4S9 175 aa8.44□□□□□ -1.06
SS18-219ENST00000581570 ZFAND2AQ8N6M9 145 aa8.44□□□□□ -1.06
SS18-219ENST00000581570 RAB2BQ8WUD1 216 aa8.44□□□□□ -1.06
SS18-219ENST00000581570 MGST2Q99735 147 aa8.44□□□□□ -1.06
SS18-219ENST00000581570 PRELID1Q9Y255 219 aa8.44□□□□□ -1.06
SS18-219ENST00000581570 TRBV19A0A075B6N1 114 aa8.43□□□□□ -1.06
SS18-219ENST00000581570 TRAV8-6A0A0B4J262 113 aa8.43□□□□□ -1.06
SS18-219ENST00000581570 LOC100131303A0A0U1RQF7 123 aa8.43□□□□□ -1.06
SS18-219ENST00000581570 ARL16Q0P5N6 197 aa8.43□□□□□ -1.06
SS18-219ENST00000581570 TMEM78Q5T7P6 136 aa8.43□□□□□ -1.06
SS18-219ENST00000581570 Q6ZRG5 221 aa8.43□□□□□ -1.06
SS18-219ENST00000581570 C9orf47Q6ZRZ4 202 aa8.43□□□□□ -1.06
SS18-219ENST00000581570 RASL10AQ92737 203 aa8.43□□□□□ -1.06
SS18-219ENST00000581570 TM2D2Q9BX73 214 aa8.43□□□□□ -1.06
SS18-219ENST00000581570 SRRQ9GZT4 340 aa8.43□□□□□ -1.06
SS18-219ENST00000581570 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.42□□□□□ -1.06
SS18-219ENST00000581570 IGHV3-30P01768 117 aa8.42□□□□□ -1.06
SS18-219ENST00000581570 IGHV3-33P01772 117 aa8.42□□□□□ -1.06
SS18-219ENST00000581570 IGHV3-30-3P0DP02 117 aa8.42□□□□□ -1.06
SS18-219ENST00000581570 IGHV3-30-5P0DP03 117 aa8.42□□□□□ -1.06
SS18-219ENST00000581570 TNFSF8P32971 234 aa8.42□□□□□ -1.06
SS18-219ENST00000581570 NHLRC2Q8NBF2 726 aa8.42□□□□□ -1.06
SS18-219ENST00000581570 OR1L4Q8NGR5 311 aa8.42□□□□□ -1.06
SS18-219ENST00000581570 MCFD2Q8NI22 146 aa8.42□□□□□ -1.06
SS18-219ENST00000581570 SLC25A21Q9BQT8 299 aaPredicted RBP8.42□□□□□ -1.06
SS18-219ENST00000581570 SPXQ9BT56 116 aa8.42□□□□□ -1.06
SS18-219ENST00000581570 GGACTQ9BVM4 153 aa8.42□□□□□ -1.06
SS18-219ENST00000581570 TIMM9Q9Y5J7 89 aa8.42□□□□□ -1.06
SS18-219ENST00000581570 TSC22D2O75157 780 aa8.41□□□□□ -1.06
SS18-219ENST00000581570 NDUFB4O95168 129 aa8.41□□□□□ -1.06
SS18-219ENST00000581570 HIST1H1EP10412 219 aaKnown RBP8.41□□□□□ -1.06
SS18-219ENST00000581570 CAMLGP49069 296 aa8.41□□□□□ -1.06
SS18-219ENST00000581570 TAS2R30P59541 319 aa8.41□□□□□ -1.06
SS18-219ENST00000581570 TDRG1Q3Y452 100 aa8.41□□□□□ -1.06
SS18-219ENST00000581570 LINC01620Q4KN68 170 aa8.41□□□□□ -1.06
SS18-219ENST00000581570 OR10J3Q5JRS4 329 aa8.41□□□□□ -1.06
SS18-219ENST00000581570 MUC21Q5SSG8 566 aa8.41□□□□□ -1.06
SS18-219ENST00000581570 MIC13Q5XKP0 118 aa8.41□□□□□ -1.06
SS18-219ENST00000581570 EXOC3-AS1Q8N2X6 119 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms