RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 ZNF492Q9P255 531 aa9.02□□□□□ -0.97
SNORD55-201ENST00000581525 IGHV3OR16-12A0A075B7B8 117 aa9.01□□□□□ -0.97
SNORD55-201ENST00000581525 SMLR1H3BR10 107 aa9.01□□□□□ -0.97
SNORD55-201ENST00000581525 H7BYZ3 331 aa9.01□□□□□ -0.97
SNORD55-201ENST00000581525 ARPC5O15511 151 aa9.01□□□□□ -0.97
SNORD55-201ENST00000581525 PRB4P10163 310 aaPredicted RBP9.01□□□□□ -0.97
SNORD55-201ENST00000581525 AZU1P20160 251 aa9.01□□□□□ -0.97
SNORD55-201ENST00000581525 CDC34P49427 236 aaPredicted RBP9.01□□□□□ -0.97
SNORD55-201ENST00000581525 UBE2L3P68036 154 aaKnown RBP9.01□□□□□ -0.97
SNORD55-201ENST00000581525 ERCC8Q13216 396 aa9.01□□□□□ -0.97
SNORD55-201ENST00000581525 GFI1BQ5VTD9 330 aa9.01□□□□□ -0.97
SNORD55-201ENST00000581525 FAM122CQ6P4D5 195 aa9.01□□□□□ -0.97
SNORD55-201ENST00000581525 ZNF493Q6ZR52 646 aa9.01□□□□□ -0.97
SNORD55-201ENST00000581525 RXFP4Q8TDU9 374 aa9.01□□□□□ -0.97
SNORD55-201ENST00000581525 TMED6Q8WW62 240 aa9.01□□□□□ -0.97
SNORD55-201ENST00000581525 OTORQ9NRC9 128 aa9.01□□□□□ -0.97
SNORD55-201ENST00000581525 LENEPQ9Y5L5 61 aa9.01□□□□□ -0.97
SNORD55-201ENST00000581525 TRAV10A0A0B4J240 114 aa9□□□□□ -0.97
SNORD55-201ENST00000581525 A0A0D9SG52 128 aa9□□□□□ -0.97
SNORD55-201ENST00000581525 LYRM9A8MSI8 78 aa9□□□□□ -0.97
SNORD55-201ENST00000581525 DIRC3C9JPN6 131 aa9□□□□□ -0.97
SNORD55-201ENST00000581525 Q6ZTC4 211 aa9□□□□□ -0.97
SNORD55-201ENST00000581525 ZFAND2AQ8N6M9 145 aa9□□□□□ -0.97
SNORD55-201ENST00000581525 VGLL1Q99990 258 aa9□□□□□ -0.97
SNORD55-201ENST00000581525 TMEM208Q9BTX3 173 aa9□□□□□ -0.97
SNORD55-201ENST00000581525 KMT2AQ03164 3969 aa8.99□□□□□ -0.97
SNORD55-201ENST00000581525 ZNF705GA8MUZ8 300 aaPredicted RBP8.99□□□□□ -0.97
SNORD55-201ENST00000581525 EIF3GO75821 320 aaKnown RBP eCLIP8.99□□□□□ -0.97
SNORD55-201ENST00000581525 PRM2P04554 102 aa8.99□□□□□ -0.97
SNORD55-201ENST00000581525 ARL14EPLP0DKL9 152 aa8.99□□□□□ -0.97
SNORD55-201ENST00000581525 CSN1S1P47710 185 aa8.99□□□□□ -0.97
SNORD55-201ENST00000581525 ZNF138P52744 262 aa8.99□□□□□ -0.97
SNORD55-201ENST00000581525 ZNF726P1Q15940 193 aa8.99□□□□□ -0.97
SNORD55-201ENST00000581525 TMEM78Q5T7P6 136 aa8.99□□□□□ -0.97
SNORD55-201ENST00000581525 TCTE3Q8IZS6 198 aa8.99□□□□□ -0.97
SNORD55-201ENST00000581525 RNASE8Q8TDE3 154 aaKnown RBP8.99□□□□□ -0.97
SNORD55-201ENST00000581525 C2CD4CQ8TF44 421 aa8.99□□□□□ -0.97
SNORD55-201ENST00000581525 LINC01587Q99440 93 aa8.99□□□□□ -0.97
SNORD55-201ENST00000581525 ARPC5LQ9BPX5 153 aa8.99□□□□□ -0.97
SNORD55-201ENST00000581525 ACTR3CQ9C0K3 210 aaPredicted RBP8.99□□□□□ -0.97
SNORD55-201ENST00000581525 APLNQ9ULZ1 77 aa8.99□□□□□ -0.97
SNORD55-201ENST00000581525 YTHDF2Q9Y5A9 579 aaKnown RBP8.99□□□□□ -0.97
SNORD55-201ENST00000581525 IGKV2-40A0A087WW87 121 aaPredicted RBP8.98□□□□□ -0.97
SNORD55-201ENST00000581525 C7orf71A4D174 169 aa8.98□□□□□ -0.97
SNORD55-201ENST00000581525 PGPA6NDG6 321 aa8.98□□□□□ -0.97
SNORD55-201ENST00000581525 CXorf1O96002 111 aa8.98□□□□□ -0.97
SNORD55-201ENST00000581525 IGKV2D-40P01614 121 aaPredicted RBP8.98□□□□□ -0.97
SNORD55-201ENST00000581525 SEC11BP0C7V7 166 aa8.98□□□□□ -0.97
SNORD55-201ENST00000581525 GCHFRP30047 84 aa8.98□□□□□ -0.97
SNORD55-201ENST00000581525 FAM222AQ5U5X8 452 aa8.98□□□□□ -0.97
SNORD55-201ENST00000581525 SSX7Q7RTT5 188 aa8.98□□□□□ -0.97
SNORD55-201ENST00000581525 TMEM263Q8WUH6 116 aaKnown RBP8.98□□□□□ -0.97
SNORD55-201ENST00000581525 C16orf74Q96GX8 76 aa8.98□□□□□ -0.97
SNORD55-201ENST00000581525 FAM210BQ96KR6 192 aa8.98□□□□□ -0.97
SNORD55-201ENST00000581525 PYGO2Q9BRQ0 406 aa8.98□□□□□ -0.97
SNORD55-201ENST00000581525 NIPSNAP3BQ9BS92 247 aa8.98□□□□□ -0.97
SNORD55-201ENST00000581525 TMEM167BQ9NRX6 74 aa8.98□□□□□ -0.97
SNORD55-201ENST00000581525 CTXND1A0A1B0GTU2 59 aa8.97□□□□□ -0.97
SNORD55-201ENST00000581525 A0A1W2PRE2 83 aa8.97□□□□□ -0.97
SNORD55-201ENST00000581525 HMGB3O15347 200 aaKnown RBP8.97□□□□□ -0.97
SNORD55-201ENST00000581525 ANXA2RQ3ZCQ2 193 aa8.97□□□□□ -0.97
SNORD55-201ENST00000581525 FAM74A1Q5RGS3 127 aa8.97□□□□□ -0.97
SNORD55-201ENST00000581525 LINC00612Q8N6U2 182 aa8.97□□□□□ -0.97
SNORD55-201ENST00000581525 LINC00476Q8WZB0 136 aa8.97□□□□□ -0.97
SNORD55-201ENST00000581525 PLA2G2EQ9NZK7 142 aa8.97□□□□□ -0.97
SNORD55-201ENST00000581525 DNAH6Q9C0G6 4158 aa8.96□□□□□ -0.97
SNORD55-201ENST00000581525 DEFB131BA0A096LNP1 70 aa8.96□□□□□ -0.98
SNORD55-201ENST00000581525 TRAV12-3A0A0B4J271 114 aa8.96□□□□□ -0.98
SNORD55-201ENST00000581525 SERTM2A0A1B0GWG4 89 aa8.96□□□□□ -0.98
SNORD55-201ENST00000581525 CD300CQ08708 224 aa8.96□□□□□ -0.98
SNORD55-201ENST00000581525 LGALS9CQ6DKI2 356 aa8.96□□□□□ -0.98
SNORD55-201ENST00000581525 TIMM8BQ9Y5J9 83 aaPredicted RBP8.96□□□□□ -0.98
SNORD55-201ENST00000581525 BCL2L11O43521 198 aa8.95□□□□□ -0.98
SNORD55-201ENST00000581525 GPX1P07203 203 aa8.95□□□□□ -0.98
SNORD55-201ENST00000581525 EMP1P54849 157 aa8.95□□□□□ -0.98
SNORD55-201ENST00000581525 DAZ2Q13117 558 aaKnown RBP8.95□□□□□ -0.98
SNORD55-201ENST00000581525 PRR9Q5T870 116 aa8.95□□□□□ -0.98
SNORD55-201ENST00000581525 Q6AWC8 147 aa8.95□□□□□ -0.98
SNORD55-201ENST00000581525 TMUB2Q71RG4 321 aa8.95□□□□□ -0.98
SNORD55-201ENST00000581525 C5orf17Q8NAS9 161 aa8.95□□□□□ -0.98
SNORD55-201ENST00000581525 TP53TG3Q9ULZ0 132 aa8.95□□□□□ -0.98
SNORD55-201ENST00000581525 CBY3A6NI87 242 aa8.94□□□□□ -0.98
SNORD55-201ENST00000581525 UMAD1C9J7I0 102 aa8.94□□□□□ -0.98
SNORD55-201ENST00000581525 C1QBP02746 253 aa8.94□□□□□ -0.98
SNORD55-201ENST00000581525 SUMO1P63165 101 aaKnown RBP8.94□□□□□ -0.98
SNORD55-201ENST00000581525 BTN1A1Q13410 526 aa8.94□□□□□ -0.98
SNORD55-201ENST00000581525 LGALSLQ3ZCW2 172 aaPredicted RBP8.94□□□□□ -0.98
SNORD55-201ENST00000581525 AKR1C8PQ5T2L2 129 aa8.94□□□□□ -0.98
SNORD55-201ENST00000581525 ZNF767PQ75MW2 155 aa8.94□□□□□ -0.98
SNORD55-201ENST00000581525 CCDC28AQ8IWP9 274 aa8.94□□□□□ -0.98
SNORD55-201ENST00000581525 EIF4E3Q8N5X7 224 aaKnown RBP8.94□□□□□ -0.98
SNORD55-201ENST00000581525 C11orf72Q8NBR9 251 aa8.94□□□□□ -0.98
SNORD55-201ENST00000581525 STOML3Q8TAV4 291 aa8.94□□□□□ -0.98
SNORD55-201ENST00000581525 CMTM2Q8TAZ6 248 aa8.94□□□□□ -0.98
SNORD55-201ENST00000581525 MBD3L1Q8WWY6 194 aa8.94□□□□□ -0.98
SNORD55-201ENST00000581525 C18orf15Q96N68 181 aa8.94□□□□□ -0.98
SNORD55-201ENST00000581525 NKX6-2Q9C056 277 aaPredicted RBP8.94□□□□□ -0.98
SNORD55-201ENST00000581525 EPDR1Q9UM22 224 aa8.94□□□□□ -0.98
SNORD55-201ENST00000581525 IGHV4-4A0A075B6R2 117 aa8.93□□□□□ -0.98
SNORD55-201ENST00000581525 KANTRA0A1W2PQU2 76 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms