RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 TTC32Q5I0X7 151 aa10.1□□□□□ -0.79
SMARCE1-216ENST00000580419 OR5C1Q8NGR4 320 aa10.1□□□□□ -0.79
SMARCE1-216ENST00000580419 GNPNAT1Q96EK6 184 aaPredicted RBP10.1□□□□□ -0.79
SMARCE1-216ENST00000580419 FAM167A-AS1Q96KT0 104 aa10.1□□□□□ -0.79
SMARCE1-216ENST00000580419 KRTAP17-1Q9BYP8 105 aa10.1□□□□□ -0.79
SMARCE1-216ENST00000580419 LINC00588Q9Y4M8 146 aa10.1□□□□□ -0.79
SMARCE1-216ENST00000580419 TIMM9Q9Y5J7 89 aa10.1□□□□□ -0.79
SMARCE1-216ENST00000580419 RYR1P21817 5038 aa10.09□□□□□ -0.79
SMARCE1-216ENST00000580419 TRAV12-3A0A0B4J271 114 aa10.09□□□□□ -0.79
SMARCE1-216ENST00000580419 RBAKDNA6NC62 111 aa10.09□□□□□ -0.79
SMARCE1-216ENST00000580419 NUDT3O95989 172 aa10.09□□□□□ -0.79
SMARCE1-216ENST00000580419 NBEAP1P0C6P0 100 aa10.09□□□□□ -0.79
SMARCE1-216ENST00000580419 CLINT1Q14677 625 aa10.09□□□□□ -0.79
SMARCE1-216ENST00000580419 C6orf223Q8N319 242 aa10.09□□□□□ -0.79
SMARCE1-216ENST00000580419 EIF4E3Q8N5X7 224 aaKnown RBP10.09□□□□□ -0.79
SMARCE1-216ENST00000580419 ARL6IP6Q8N6S5 226 aa10.09□□□□□ -0.79
SMARCE1-216ENST00000580419 C11orf72Q8NBR9 251 aa10.09□□□□□ -0.79
SMARCE1-216ENST00000580419 ENKURQ8TC29 256 aa10.09□□□□□ -0.79
SMARCE1-216ENST00000580419 MARVELD1Q9BSK0 173 aa10.09□□□□□ -0.79
SMARCE1-216ENST00000580419 WDR61Q9GZS3 305 aaKnown RBP10.09□□□□□ -0.79
SMARCE1-216ENST00000580419 AGPAT4-IT1Q9H0P7 198 aa10.09□□□□□ -0.79
SMARCE1-216ENST00000580419 LENEPQ9Y5L5 61 aa10.09□□□□□ -0.79
SMARCE1-216ENST00000580419 H3BTX0 84 aa10.08□□□□□ -0.8
SMARCE1-216ENST00000580419 M0R3E3 92 aa10.08□□□□□ -0.8
SMARCE1-216ENST00000580419 PET100P0DJ07 73 aa10.08□□□□□ -0.8
SMARCE1-216ENST00000580419 NHLH2Q02577 135 aa10.08□□□□□ -0.8
SMARCE1-216ENST00000580419 SSX7Q7RTT5 188 aa10.08□□□□□ -0.8
SMARCE1-216ENST00000580419 SLC25A2Q9BXI2 301 aa10.08□□□□□ -0.8
SMARCE1-216ENST00000580419 TP53TG3Q9ULZ0 132 aa10.08□□□□□ -0.8
SMARCE1-216ENST00000580419 TRAV26-1A0A087WT03 109 aa10.07□□□□□ -0.8
SMARCE1-216ENST00000580419 C17orf112F2Z3M2 114 aa10.07□□□□□ -0.8
SMARCE1-216ENST00000580419 SNRPCP09234 159 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-216ENST00000580419 TCL1AP56279 114 aa10.07□□□□□ -0.8
SMARCE1-216ENST00000580419 SLAQ13239 276 aa10.07□□□□□ -0.8
SMARCE1-216ENST00000580419 TMEM78Q5T7P6 136 aa10.07□□□□□ -0.8
SMARCE1-216ENST00000580419 PARD6GQ9BYG4 376 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-216ENST00000580419 OR51M1Q9H341 326 aa10.07□□□□□ -0.8
SMARCE1-216ENST00000580419 Q9H3A6 140 aa10.07□□□□□ -0.8
SMARCE1-216ENST00000580419 Q9H8V8 135 aa10.07□□□□□ -0.8
SMARCE1-216ENST00000580419 PTTG2Q9NZH5 202 aa10.07□□□□□ -0.8
SMARCE1-216ENST00000580419 ZNF492Q9P255 531 aa10.07□□□□□ -0.8
SMARCE1-216ENST00000580419 A6NHS1 94 aa10.06□□□□□ -0.8
SMARCE1-216ENST00000580419 INMT-MINDY4F8WBC2 141 aa10.06□□□□□ -0.8
SMARCE1-216ENST00000580419 H0YIZ8 118 aa10.06□□□□□ -0.8
SMARCE1-216ENST00000580419 SPINK4O60575 86 aa10.06□□□□□ -0.8
SMARCE1-216ENST00000580419 PYYP10082 97 aa10.06□□□□□ -0.8
SMARCE1-216ENST00000580419 HOXA5P20719 270 aa10.06□□□□□ -0.8
SMARCE1-216ENST00000580419 ZFAND2AQ8N6M9 145 aa10.06□□□□□ -0.8
SMARCE1-216ENST00000580419 TMED6Q8WW62 240 aa10.06□□□□□ -0.8
SMARCE1-216ENST00000580419 FUT9Q9Y231 359 aa10.06□□□□□ -0.8
SMARCE1-216ENST00000580419 MRPS16Q9Y3D3 137 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-216ENST00000580419 GAGE12BA1L429 117 aa10.05□□□□□ -0.8
SMARCE1-216ENST00000580419 GAGE7O76087 117 aa10.05□□□□□ -0.8
SMARCE1-216ENST00000580419 GPX1P07203 203 aa10.05□□□□□ -0.8
SMARCE1-216ENST00000580419 GAGE12FP0CL80 117 aa10.05□□□□□ -0.8
SMARCE1-216ENST00000580419 GAGE12GP0CL81 117 aa10.05□□□□□ -0.8
SMARCE1-216ENST00000580419 GAGE12IP0CL82 117 aa10.05□□□□□ -0.8
SMARCE1-216ENST00000580419 OR5I1Q13606 314 aa10.05□□□□□ -0.8
SMARCE1-216ENST00000580419 ICAM4Q14773 271 aa10.05□□□□□ -0.8
SMARCE1-216ENST00000580419 GCSAMLQ5JQS6 135 aa10.05□□□□□ -0.8
SMARCE1-216ENST00000580419 FXYD5Q96DB9 178 aa10.05□□□□□ -0.8
SMARCE1-216ENST00000580419 ATP5SQ99766 215 aa10.05□□□□□ -0.8
SMARCE1-216ENST00000580419 PAXXQ9BUH6 204 aa10.05□□□□□ -0.8
SMARCE1-216ENST00000580419 OR5AC2Q9NZP5 309 aa10.05□□□□□ -0.8
SMARCE1-216ENST00000580419 LRP1BQ9NZR2 4599 aa10.05□□□□□ -0.8
SMARCE1-216ENST00000580419 CDK2AP2O75956 126 aa10.04□□□□□ -0.8
SMARCE1-216ENST00000580419 ZNF138P52744 262 aa10.04□□□□□ -0.8
SMARCE1-216ENST00000580419 H2BFSP57053 126 aa10.04□□□□□ -0.8
SMARCE1-216ENST00000580419 CD300CQ08708 224 aa10.04□□□□□ -0.8
SMARCE1-216ENST00000580419 Q6ZTI0 123 aa10.04□□□□□ -0.8
SMARCE1-216ENST00000580419 MIR17HGQ75NE6 70 aa10.04□□□□□ -0.8
SMARCE1-216ENST00000580419 EXOC3-AS1Q8N2X6 119 aa10.04□□□□□ -0.8
SMARCE1-216ENST00000580419 THAP6Q8TBB0 222 aa10.04□□□□□ -0.8
SMARCE1-216ENST00000580419 PPP1R1CQ8WVI7 109 aa10.04□□□□□ -0.8
SMARCE1-216ENST00000580419 ST6GAL2Q96JF0 529 aa10.04□□□□□ -0.8
SMARCE1-216ENST00000580419 HSPG2P98160 4391 aa10.04□□□□□ -0.8
SMARCE1-216ENST00000580419 TRGV2A0A075B6R0 118 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 K7EP13 123 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 MPC2O95563 127 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 CSN1S1P47710 185 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 TAS2R45P59539 299 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 DEFA1P59665 94 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 DEFA3P59666 94 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 IFITM3Q01628 133 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 ERCC8Q13216 396 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 ZNF266Q14584 549 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 ESRGQ1W209 222 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 IQCF2Q8IXL9 164 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 BLNKQ8WV28 456 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 VSIG2Q96IQ7 327 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 VGLL1Q99990 258 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 TMPRSS5Q9H3S3 457 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 GSN-AS1Q9NRJ2 163 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 KLF12Q9Y4X4 402 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 HSPB11Q9Y547 144 aa10.03□□□□□ -0.8
SMARCE1-216ENST00000580419 IGHV1OR15-1A0A075B7D0 117 aa10.02□□□□□ -0.81
SMARCE1-216ENST00000580419 SIX6O95475 246 aa10.02□□□□□ -0.81
SMARCE1-216ENST00000580419 RNASE4P34096 147 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-216ENST00000580419 TNP2Q05952 138 aa10.02□□□□□ -0.81
SMARCE1-216ENST00000580419 BTN1A1Q13410 526 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms