RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 ZNF705EA8MWA4 302 aaPredicted RBP13.98□□□□□ -0.17
LIMD2-209ENST00000580222 DEFB1P60022 68 aa13.98□□□□□ -0.17
LIMD2-209ENST00000580222 ICAM4Q14773 271 aa13.98□□□□□ -0.17
LIMD2-209ENST00000580222 EBLN2Q6P2I7 272 aa13.98□□□□□ -0.17
LIMD2-209ENST00000580222 FOXI2Q6ZQN5 318 aa13.98□□□□□ -0.17
LIMD2-209ENST00000580222 STHQ8IWL8 128 aa13.98□□□□□ -0.17
LIMD2-209ENST00000580222 RPUSD4Q96CM3 377 aaKnown RBP13.98□□□□□ -0.17
LIMD2-209ENST00000580222 CSTL1Q9H114 145 aa13.98□□□□□ -0.17
LIMD2-209ENST00000580222 TMPRSS5Q9H3S3 457 aa13.98□□□□□ -0.17
LIMD2-209ENST00000580222 PRELID1Q9Y255 219 aa13.98□□□□□ -0.17
LIMD2-209ENST00000580222 F6UB75 175 aa13.97□□□□□ -0.17
LIMD2-209ENST00000580222 TEX46H3BTG2 121 aa13.97□□□□□ -0.17
LIMD2-209ENST00000580222 LYPD1Q8N2G4 141 aa13.97□□□□□ -0.17
LIMD2-209ENST00000580222 SUN5Q8TC36 379 aa13.97□□□□□ -0.17
LIMD2-209ENST00000580222 MRPL53Q96EL3 112 aaKnown RBP13.97□□□□□ -0.17
LIMD2-209ENST00000580222 SAV1Q9H4B6 383 aaPredicted RBP13.97□□□□□ -0.17
LIMD2-209ENST00000580222 ZNF705FA8MVS1 300 aaPredicted RBP13.96□□□□□ -0.17
LIMD2-209ENST00000580222 M0R3E3 92 aa13.96□□□□□ -0.17
LIMD2-209ENST00000580222 HBE1P02100 147 aa13.96□□□□□ -0.17
LIMD2-209ENST00000580222 PRB4P10163 310 aaPredicted RBP13.96□□□□□ -0.17
LIMD2-209ENST00000580222 GDF5OSQ5U4N7 250 aa13.96□□□□□ -0.17
LIMD2-209ENST00000580222 OTORQ9NRC9 128 aa13.96□□□□□ -0.17
LIMD2-209ENST00000580222 A0A0J9YX75 114 aa13.95□□□□□ -0.18
LIMD2-209ENST00000580222 HLA-DRB4P13762 266 aa13.95□□□□□ -0.18
LIMD2-209ENST00000580222 UBE2G2P60604 165 aa13.95□□□□□ -0.18
LIMD2-209ENST00000580222 HLA-DRB4X5D2U9 266 aa13.95□□□□□ -0.18
LIMD2-209ENST00000580222 DNAH5Q8TE73 4624 aa13.95□□□□□ -0.18
LIMD2-209ENST00000580222 IGHV4-4A0A075B6R2 117 aa13.94□□□□□ -0.18
LIMD2-209ENST00000580222 PGPA6NDG6 321 aa13.94□□□□□ -0.18
LIMD2-209ENST00000580222 CSN1S1P47710 185 aa13.94□□□□□ -0.18
LIMD2-209ENST00000580222 BLOC1S1P78537 153 aa13.94□□□□□ -0.18
LIMD2-209ENST00000580222 HIST1H1AQ02539 215 aaPredicted RBP13.94□□□□□ -0.18
LIMD2-209ENST00000580222 TEX261Q6UWH6 196 aa13.94□□□□□ -0.18
LIMD2-209ENST00000580222 TRPT1Q86TN4 253 aaKnown RBP13.94□□□□□ -0.18
LIMD2-209ENST00000580222 OR4B1Q8NGF8 309 aa13.94□□□□□ -0.18
LIMD2-209ENST00000580222 OR8A1Q8NGG7 326 aa13.94□□□□□ -0.18
LIMD2-209ENST00000580222 CMTM2Q8TAZ6 248 aa13.94□□□□□ -0.18
LIMD2-209ENST00000580222 RPH3ALQ9UNE2 315 aa13.94□□□□□ -0.18
LIMD2-209ENST00000580222 PRAC2D3DTV9 90 aa13.93□□□□□ -0.18
LIMD2-209ENST00000580222 H3BMM0 161 aa13.93□□□□□ -0.18
LIMD2-209ENST00000580222 DUSP14O95147 198 aaKnown RBP13.93□□□□□ -0.18
LIMD2-209ENST00000580222 IFNA7P01567 189 aa13.93□□□□□ -0.18
LIMD2-209ENST00000580222 IGKV3-20P01619 116 aa13.93□□□□□ -0.18
LIMD2-209ENST00000580222 ZNF705DP0CH99 300 aaPredicted RBP13.93□□□□□ -0.18
LIMD2-209ENST00000580222 ZNF705BP0CI00 300 aaPredicted RBP13.93□□□□□ -0.18
LIMD2-209ENST00000580222 OR10J6PQ8NGY7 276 aa13.93□□□□□ -0.18
LIMD2-209ENST00000580222 TRAV1-1A0A0B4J248 108 aa13.92□□□□□ -0.18
LIMD2-209ENST00000580222 A0A1W2PRE2 83 aa13.92□□□□□ -0.18
LIMD2-209ENST00000580222 SLC25A5P05141 298 aaKnown RBP13.92□□□□□ -0.18
LIMD2-209ENST00000580222 RBMY1A1P0DJD3 496 aaKnown RBP13.92□□□□□ -0.18
LIMD2-209ENST00000580222 RBMY1CP0DJD4 496 aa13.92□□□□□ -0.18
LIMD2-209ENST00000580222 PPT1P50897 306 aa13.92□□□□□ -0.18
LIMD2-209ENST00000580222 RBMY1FQ15415 496 aaKnown RBP13.92□□□□□ -0.18
LIMD2-209ENST00000580222 Q6ZTC4 211 aa13.92□□□□□ -0.18
LIMD2-209ENST00000580222 RXFP4Q8TDU9 374 aa13.92□□□□□ -0.18
LIMD2-209ENST00000580222 YTHDF2Q9Y5A9 579 aaKnown RBP13.92□□□□□ -0.18
LIMD2-209ENST00000580222 GGTLC3B5MD39 225 aa13.91□□□□□ -0.18
LIMD2-209ENST00000580222 C11orf94C9JXX5 98 aa13.91□□□□□ -0.18
LIMD2-209ENST00000580222 CNN1P51911 297 aaKnown RBP13.91□□□□□ -0.18
LIMD2-209ENST00000580222 POM121L12Q8N7R1 296 aa13.91□□□□□ -0.18
LIMD2-209ENST00000580222 MAPKAPK5-AS1Q8N8E1 139 aa13.91□□□□□ -0.18
LIMD2-209ENST00000580222 Q8NAQ8 132 aa13.91□□□□□ -0.18
LIMD2-209ENST00000580222 ZNF680Q8NEM1 530 aa13.91□□□□□ -0.18
LIMD2-209ENST00000580222 IGKV2-40A0A087WW87 121 aaPredicted RBP13.9□□□□□ -0.18
LIMD2-209ENST00000580222 FAM74A7A6NL05 159 aa13.9□□□□□ -0.18
LIMD2-209ENST00000580222 IGKV2D-40P01614 121 aaPredicted RBP13.9□□□□□ -0.18
LIMD2-209ENST00000580222 SUMO1P63165 101 aaKnown RBP13.9□□□□□ -0.18
LIMD2-209ENST00000580222 CST9LP1Q5W188 147 aa13.9□□□□□ -0.18
LIMD2-209ENST00000580222 C5orf17Q8NAS9 161 aa13.9□□□□□ -0.18
LIMD2-209ENST00000580222 GNG13Q9P2W3 67 aa13.9□□□□□ -0.18
LIMD2-209ENST00000580222 ARL2-SNX15V9GYD0 113 aa13.9□□□□□ -0.18
LIMD2-209ENST00000580222 PAGE4O60829 102 aa13.89□□□□□ -0.19
LIMD2-209ENST00000580222 IFNA1P01562 189 aa13.89□□□□□ -0.19
LIMD2-209ENST00000580222 NUTF2P61970 127 aaKnown RBP13.89□□□□□ -0.19
LIMD2-209ENST00000580222 GNG5P63218 68 aa13.89□□□□□ -0.19
LIMD2-209ENST00000580222 MORN3Q6PF18 240 aaPredicted RBP13.89□□□□□ -0.19
LIMD2-209ENST00000580222 MANBALQ9NQG1 85 aa13.89□□□□□ -0.19
LIMD2-209ENST00000580222 PPP1R14DQ9NXH3 145 aa13.89□□□□□ -0.19
LIMD2-209ENST00000580222 DIRC3C9JPN6 131 aa13.88□□□□□ -0.19
LIMD2-209ENST00000580222 CA1P00915 261 aaPredicted RBP13.88□□□□□ -0.19
LIMD2-209ENST00000580222 CCL20P78556 96 aa13.88□□□□□ -0.19
LIMD2-209ENST00000580222 NKX6-2Q9C056 277 aaPredicted RBP13.88□□□□□ -0.19
LIMD2-209ENST00000580222 AGRNO00468 2067 aa13.87□□□□□ -0.19
LIMD2-209ENST00000580222 NPIPB6E9PJ23 425 aa13.87□□□□□ -0.19
LIMD2-209ENST00000580222 ATP5G3P48201 142 aa13.87□□□□□ -0.19
LIMD2-209ENST00000580222 ERCC8Q13216 396 aa13.87□□□□□ -0.19
LIMD2-209ENST00000580222 LGALS9BQ3B8N2 356 aa13.87□□□□□ -0.19
LIMD2-209ENST00000580222 GOLT1AQ6ZVE7 132 aa13.87□□□□□ -0.19
LIMD2-209ENST00000580222 ARL6IP6Q8N6S5 226 aa13.87□□□□□ -0.19
LIMD2-209ENST00000580222 CLUHP3Q96NS8 147 aa13.87□□□□□ -0.19
LIMD2-209ENST00000580222 TRAV10A0A0B4J240 114 aa13.86□□□□□ -0.19
LIMD2-209ENST00000580222 IGHV4-28A0A0C4DH34 117 aa13.86□□□□□ -0.19
LIMD2-209ENST00000580222 RBAKDNA6NC62 111 aa13.86□□□□□ -0.19
LIMD2-209ENST00000580222 A8MTW9 85 aa13.86□□□□□ -0.19
LIMD2-209ENST00000580222 FXYD7P58549 80 aa13.86□□□□□ -0.19
LIMD2-209ENST00000580222 TMEM78Q5T7P6 136 aa13.86□□□□□ -0.19
LIMD2-209ENST00000580222 Q6ZR54 194 aa13.86□□□□□ -0.19
LIMD2-209ENST00000580222 PCNPQ8WW12 178 aaKnown RBP13.86□□□□□ -0.19
LIMD2-209ENST00000580222 SLC35B3Q9H1N7 401 aa13.86□□□□□ -0.19
LIMD2-209ENST00000580222 EPDR1Q9UM22 224 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms