RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 TRGV4A0A0C4DH28 118 aa8.19□□□□□ -1.1
CDK5RAP3-216ENST00000579853 E5RGE8 158 aa8.19□□□□□ -1.1
CDK5RAP3-216ENST00000579853 H3BTX0 84 aa8.19□□□□□ -1.1
CDK5RAP3-216ENST00000579853 RGS13O14921 159 aa8.19□□□□□ -1.1
CDK5RAP3-216ENST00000579853 GPX1P07203 203 aa8.19□□□□□ -1.1
CDK5RAP3-216ENST00000579853 RRAS2P62070 204 aaPredicted RBP8.19□□□□□ -1.1
CDK5RAP3-216ENST00000579853 SLC38A11Q08AI6 406 aa8.19□□□□□ -1.1
CDK5RAP3-216ENST00000579853 ZNF415Q09FC8 603 aa8.19□□□□□ -1.1
CDK5RAP3-216ENST00000579853 SH2D6Q7Z4S9 175 aa8.19□□□□□ -1.1
CDK5RAP3-216ENST00000579853 IQCF2Q8IXL9 164 aa8.19□□□□□ -1.1
CDK5RAP3-216ENST00000579853 SMIM8Q96KF7 97 aa8.19□□□□□ -1.1
CDK5RAP3-216ENST00000579853 ARPC5LQ9BPX5 153 aa8.19□□□□□ -1.1
CDK5RAP3-216ENST00000579853 SLC25A21Q9BQT8 299 aaPredicted RBP8.19□□□□□ -1.1
CDK5RAP3-216ENST00000579853 CCDC59Q9P031 241 aaKnown RBP8.19□□□□□ -1.1
CDK5RAP3-216ENST00000579853 H3BQ15 152 aa8.18□□□□□ -1.1
CDK5RAP3-216ENST00000579853 AGPAT2O15120 278 aa8.18□□□□□ -1.1
CDK5RAP3-216ENST00000579853 SFT2D2O95562 160 aa8.18□□□□□ -1.1
CDK5RAP3-216ENST00000579853 OXTP01178 125 aa8.18□□□□□ -1.1
CDK5RAP3-216ENST00000579853 OR4E1P0C645 316 aa8.18□□□□□ -1.1
CDK5RAP3-216ENST00000579853 RNASE4P34096 147 aaKnown RBP8.18□□□□□ -1.1
CDK5RAP3-216ENST00000579853 AP3S2P59780 193 aa8.18□□□□□ -1.1
CDK5RAP3-216ENST00000579853 OPCMLQ14982 345 aa8.18□□□□□ -1.1
CDK5RAP3-216ENST00000579853 C10orf113Q5VZT2 155 aa8.18□□□□□ -1.1
CDK5RAP3-216ENST00000579853 Q6ZRG5 221 aa8.18□□□□□ -1.1
CDK5RAP3-216ENST00000579853 TMEM37Q8WXS4 190 aa8.18□□□□□ -1.1
CDK5RAP3-216ENST00000579853 GGACTQ9BVM4 153 aa8.18□□□□□ -1.1
CDK5RAP3-216ENST00000579853 NAA50Q9GZZ1 169 aaKnown RBP8.18□□□□□ -1.1
CDK5RAP3-216ENST00000579853 MRPL16Q9NX20 251 aaKnown RBP8.18□□□□□ -1.1
CDK5RAP3-216ENST00000579853 FAM30AQ9NZY2 134 aa8.18□□□□□ -1.1
CDK5RAP3-216ENST00000579853 PRELID1Q9Y255 219 aa8.18□□□□□ -1.1
CDK5RAP3-216ENST00000579853 IGHV1OR15-1A0A075B7D0 117 aa8.17□□□□□ -1.1
CDK5RAP3-216ENST00000579853 IGHV3-38A0A0C4DH36 116 aa8.17□□□□□ -1.1
CDK5RAP3-216ENST00000579853 C9JCJ5 164 aa8.17□□□□□ -1.1
CDK5RAP3-216ENST00000579853 METTL15P1P0C7V9 234 aa8.17□□□□□ -1.1
CDK5RAP3-216ENST00000579853 GYPEP15421 78 aa8.17□□□□□ -1.1
CDK5RAP3-216ENST00000579853 CRISP2P16562 243 aa8.17□□□□□ -1.1
CDK5RAP3-216ENST00000579853 TAS2R30P59541 319 aa8.17□□□□□ -1.1
CDK5RAP3-216ENST00000579853 CD300CQ08708 224 aa8.17□□□□□ -1.1
CDK5RAP3-216ENST00000579853 BTN1A1Q13410 526 aa8.17□□□□□ -1.1
CDK5RAP3-216ENST00000579853 TMEM14EPQ6UXP3 125 aa8.17□□□□□ -1.1
CDK5RAP3-216ENST00000579853 Q6ZSA8 131 aa8.17□□□□□ -1.1
CDK5RAP3-216ENST00000579853 FAM19A4Q96LR4 140 aa8.17□□□□□ -1.1
CDK5RAP3-216ENST00000579853 DNAJC4Q9NNZ3 241 aa8.17□□□□□ -1.1
CDK5RAP3-216ENST00000579853 RCL1Q9Y2P8 373 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-216ENST00000579853 IBA57-AS1B1ANH7 110 aa8.16□□□□□ -1.1
CDK5RAP3-216ENST00000579853 SSSCA1O60232 199 aa8.16□□□□□ -1.1
CDK5RAP3-216ENST00000579853 TIRAPP58753 221 aa8.16□□□□□ -1.1
CDK5RAP3-216ENST00000579853 UBE2MP61081 183 aaKnown RBP8.16□□□□□ -1.1
CDK5RAP3-216ENST00000579853 PPP1R1AQ13522 171 aa8.16□□□□□ -1.1
CDK5RAP3-216ENST00000579853 RAB31Q13636 194 aa8.16□□□□□ -1.1
CDK5RAP3-216ENST00000579853 TDRG1Q3Y452 100 aa8.16□□□□□ -1.1
CDK5RAP3-216ENST00000579853 LINC01556Q5JQF7 62 aa8.16□□□□□ -1.1
CDK5RAP3-216ENST00000579853 C12orf45Q8N5I9 185 aaPredicted RBP8.16□□□□□ -1.1
CDK5RAP3-216ENST00000579853 OR10G4Q8NGN3 311 aa8.16□□□□□ -1.1
CDK5RAP3-216ENST00000579853 OR1L4Q8NGR5 311 aa8.16□□□□□ -1.1
CDK5RAP3-216ENST00000579853 DEDD2Q8WXF8 326 aa8.16□□□□□ -1.1
CDK5RAP3-216ENST00000579853 PFDN5Q99471 154 aa8.16□□□□□ -1.1
CDK5RAP3-216ENST00000579853 SRRQ9GZT4 340 aa8.16□□□□□ -1.1
CDK5RAP3-216ENST00000579853 TSC22D2O75157 780 aa8.15□□□□□ -1.1
CDK5RAP3-216ENST00000579853 HIST1H1EP10412 219 aaKnown RBP8.15□□□□□ -1.1
CDK5RAP3-216ENST00000579853 ERCC8Q13216 396 aa8.15□□□□□ -1.1
CDK5RAP3-216ENST00000579853 PDE6HQ13956 83 aa8.15□□□□□ -1.1
CDK5RAP3-216ENST00000579853 TMEM78Q5T7P6 136 aa8.15□□□□□ -1.1
CDK5RAP3-216ENST00000579853 MORN5Q5VZ52 161 aa8.15□□□□□ -1.1
CDK5RAP3-216ENST00000579853 AGPAT4-IT1Q9H0P7 198 aa8.15□□□□□ -1.1
CDK5RAP3-216ENST00000579853 TRBV19A0A075B6N1 114 aa8.14□□□□□ -1.11
CDK5RAP3-216ENST00000579853 FABP12A6NFH5 140 aa8.14□□□□□ -1.11
CDK5RAP3-216ENST00000579853 M0R3E3 92 aa8.14□□□□□ -1.11
CDK5RAP3-216ENST00000579853 CCNKO75909 580 aa8.14□□□□□ -1.11
CDK5RAP3-216ENST00000579853 CAMLGP49069 296 aa8.14□□□□□ -1.11
CDK5RAP3-216ENST00000579853 C9orf47Q6ZRZ4 202 aa8.14□□□□□ -1.11
CDK5RAP3-216ENST00000579853 TOMM5Q8N4H5 51 aa8.14□□□□□ -1.11
CDK5RAP3-216ENST00000579853 MCFD2Q8NI22 146 aa8.14□□□□□ -1.11
CDK5RAP3-216ENST00000579853 RASL10AQ92737 203 aa8.14□□□□□ -1.11
CDK5RAP3-216ENST00000579853 SPXQ9BT56 116 aa8.14□□□□□ -1.11
CDK5RAP3-216ENST00000579853 TM2D2Q9BX73 214 aa8.14□□□□□ -1.11
CDK5RAP3-216ENST00000579853 SLC25A31Q9H0C2 315 aa8.14□□□□□ -1.11
CDK5RAP3-216ENST00000579853 TP53TG3Q9ULZ0 132 aa8.14□□□□□ -1.11
CDK5RAP3-216ENST00000579853 TRAV8-6A0A0B4J262 113 aa8.13□□□□□ -1.11
CDK5RAP3-216ENST00000579853 TRBV7-9A0A0J9YWB2 115 aa8.13□□□□□ -1.11
CDK5RAP3-216ENST00000579853 SFTA3P0C7M3 94 aa8.13□□□□□ -1.11
CDK5RAP3-216ENST00000579853 LAGE3Q14657 143 aa8.13□□□□□ -1.11
CDK5RAP3-216ENST00000579853 ZFAND2AQ8N6M9 145 aa8.13□□□□□ -1.11
CDK5RAP3-216ENST00000579853 BLNKQ8WV28 456 aa8.13□□□□□ -1.11
CDK5RAP3-216ENST00000579853 ZNF479Q96JC4 524 aa8.13□□□□□ -1.11
CDK5RAP3-216ENST00000579853 MGST2Q99735 147 aa8.13□□□□□ -1.11
CDK5RAP3-216ENST00000579853 AAMDCQ9H7C9 122 aa8.13□□□□□ -1.11
CDK5RAP3-216ENST00000579853 Q9HAA7 133 aa8.13□□□□□ -1.11
CDK5RAP3-216ENST00000579853 TIMM9Q9Y5J7 89 aa8.13□□□□□ -1.11
CDK5RAP3-216ENST00000579853 PPT1P50897 306 aa8.12□□□□□ -1.11
CDK5RAP3-216ENST00000579853 ASAH1Q13510 395 aa8.12□□□□□ -1.11
CDK5RAP3-216ENST00000579853 SPCS2Q15005 226 aa8.12□□□□□ -1.11
CDK5RAP3-216ENST00000579853 DYNC2LI1Q8TCX1 351 aa8.12□□□□□ -1.11
CDK5RAP3-216ENST00000579853 RAB2BQ8WUD1 216 aa8.12□□□□□ -1.11
CDK5RAP3-216ENST00000579853 SOSTQ9BQB4 213 aa8.12□□□□□ -1.11
CDK5RAP3-216ENST00000579853 TMEM14CQ9P0S9 112 aa8.12□□□□□ -1.11
CDK5RAP3-216ENST00000579853 TRAV4A0A0B4J268 109 aa8.11□□□□□ -1.11
CDK5RAP3-216ENST00000579853 C9orf170A2RU37 121 aa8.11□□□□□ -1.11
CDK5RAP3-216ENST00000579853 PFN1P07737 140 aaKnown RBP8.11□□□□□ -1.11
CDK5RAP3-216ENST00000579853 TNFSF8P32971 234 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms