RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 IGHV4OR15-8A0A075B7B6 117 aa4.71□□□□□ -1.66
COPS3-216ENST00000579716 IGHV3OR16-10A0A075B7F0 116 aa4.71□□□□□ -1.66
COPS3-216ENST00000579716 IGHV3-74A0A0B4J1X5 117 aa4.71□□□□□ -1.66
COPS3-216ENST00000579716 IGKV6-21A0A0C4DH24 114 aa4.71□□□□□ -1.66
COPS3-216ENST00000579716 J3QLW9 94 aa4.71□□□□□ -1.66
COPS3-216ENST00000579716 PRR4Q16378 134 aa4.71□□□□□ -1.66
COPS3-216ENST00000579716 ASB16-AS1Q495Z4 193 aa4.71□□□□□ -1.66
COPS3-216ENST00000579716 Q6ZQT7 251 aa4.71□□□□□ -1.66
COPS3-216ENST00000579716 NUP37Q8NFH4 326 aa4.71□□□□□ -1.66
COPS3-216ENST00000579716 MPLKIPQ8TAP9 179 aa4.71□□□□□ -1.66
COPS3-216ENST00000579716 LINC01600Q96MT4 127 aa4.71□□□□□ -1.66
COPS3-216ENST00000579716 CST11Q9H112 138 aa4.71□□□□□ -1.66
COPS3-216ENST00000579716 CSAG2Q9Y5P2 127 aa4.71□□□□□ -1.66
COPS3-216ENST00000579716 A0A087X002 238 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 IGKV1-12A0A0C4DH73 117 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 KRTAP16-1A8MUX0 517 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 CCL16O15467 120 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 NDUFC1O43677 76 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 IGKV1D-12P01611 117 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 IGKV1-16P04430 117 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 CXCL8P10145 99 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 RPL27AP46776 148 aaKnown RBP4.7□□□□□ -1.66
COPS3-216ENST00000579716 DSCR9P59020 149 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 GNB1P62873 340 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 Q0VFX4 171 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 FHL1Q13642 323 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 INSL4Q14641 139 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 CEMP1Q6PRD7 247 aaPredicted RBP4.7□□□□□ -1.66
COPS3-216ENST00000579716 NFE4Q86UQ8 179 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 OCR1Q9BZK8 76 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 SND1-IT1Q9HBX3 110 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 NESP48681 1621 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 NFAT5O94916 1531 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 NWD1Q149M9 1564 aa4.7□□□□□ -1.66
COPS3-216ENST00000579716 KIAA1671Q9BY89 1806 aa4.69□□□□□ -1.66
COPS3-216ENST00000579716 ARHGEF28Q8N1W1 1705 aaKnown RBP4.69□□□□□ -1.66
COPS3-216ENST00000579716 E7EQL1 145 aa4.69□□□□□ -1.66
COPS3-216ENST00000579716 LEPROTO15243 131 aa4.69□□□□□ -1.66
COPS3-216ENST00000579716 ASAH2BP0C7U1 165 aa4.69□□□□□ -1.66
COPS3-216ENST00000579716 UBE2G1P62253 170 aa4.69□□□□□ -1.66
COPS3-216ENST00000579716 CASC10Q5T4H9 136 aa4.69□□□□□ -1.66
COPS3-216ENST00000579716 C19orf48Q6RUI8 117 aa4.69□□□□□ -1.66
COPS3-216ENST00000579716 SOSTDC1Q6X4U4 206 aa4.69□□□□□ -1.66
COPS3-216ENST00000579716 ZNF497Q6ZNH5 498 aa4.69□□□□□ -1.66
COPS3-216ENST00000579716 C18orf65Q6ZTR6 163 aa4.69□□□□□ -1.66
COPS3-216ENST00000579716 CXCL16Q9H2A7 254 aa4.69□□□□□ -1.66
COPS3-216ENST00000579716 SCRT2Q9NQ03 307 aa4.69□□□□□ -1.66
COPS3-216ENST00000579716 ZNF580Q9UK33 172 aa4.69□□□□□ -1.66
COPS3-216ENST00000579716 RGPD2P0DJD1 1756 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 KDM3BQ7LBC6 1761 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 ASXL1Q8IXJ9 1541 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 PATJQ8NI35 1801 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 TRAV14DV4A0A0A6YYC5 116 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 IBA57-AS1B1ANH7 110 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 F2Z2F3 143 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 C3orf84H3BNL1 204 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 SMIM11AP58511 58 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 LPAL2Q16609 132 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 ODF3L2Q3SX64 289 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 REG3GQ6UW15 175 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 PATE2Q6UY27 113 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 ORMDL3Q8N138 153 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 CLEC2BQ92478 149 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 SCGB3A1Q96QR1 104 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 SCRT1Q9BWW7 348 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 HCFC1P51610 2035 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 LRRK1Q38SD2 2015 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 RGPD8O14715 1765 aaPredicted RBP4.68□□□□□ -1.66
COPS3-216ENST00000579716 RGPD5Q99666 1765 aa4.68□□□□□ -1.66
COPS3-216ENST00000579716 HELZP42694 1942 aaKnown RBP4.68□□□□□ -1.66
COPS3-216ENST00000579716 IGHV4-30-2A0A087WSY4 118 aa4.67□□□□□ -1.66
COPS3-216ENST00000579716 FAM72CH0Y354 149 aa4.67□□□□□ -1.66
COPS3-216ENST00000579716 LY6G6DO95868 133 aa4.67□□□□□ -1.66
COPS3-216ENST00000579716 CCKP06307 115 aa4.67□□□□□ -1.66
COPS3-216ENST00000579716 COX8AP10176 69 aa4.67□□□□□ -1.66
COPS3-216ENST00000579716 EGFEM1PQ0D2K5 195 aa4.67□□□□□ -1.66
COPS3-216ENST00000579716 TMEM170BQ5T4T1 132 aa4.67□□□□□ -1.66
COPS3-216ENST00000579716 FAM72DQ6L9T8 149 aa4.67□□□□□ -1.66
COPS3-216ENST00000579716 CLDND2Q8NHS1 167 aa4.67□□□□□ -1.66
COPS3-216ENST00000579716 SMIM14Q96QK8 99 aa4.67□□□□□ -1.66
COPS3-216ENST00000579716 MANBALQ9NQG1 85 aa4.67□□□□□ -1.66
COPS3-216ENST00000579716 DOCK8Q8NF50 2099 aa4.67□□□□□ -1.66
COPS3-216ENST00000579716 CLTCL1P53675 1640 aa4.66□□□□□ -1.66
COPS3-216ENST00000579716 RPL37AP8A6NKH3 93 aa4.66□□□□□ -1.66
COPS3-216ENST00000579716 A6NN06 94 aa4.66□□□□□ -1.66
COPS3-216ENST00000579716 IGKV1-39P01597 117 aa4.66□□□□□ -1.66
COPS3-216ENST00000579716 IGKV1D-39P04432 117 aa4.66□□□□□ -1.66
COPS3-216ENST00000579716 NPPCP23582 126 aa4.66□□□□□ -1.66
COPS3-216ENST00000579716 LMO2P25791 158 aa4.66□□□□□ -1.66
COPS3-216ENST00000579716 NANOS2P60321 138 aaKnown RBP4.66□□□□□ -1.66
COPS3-216ENST00000579716 FAM104BQ5XKR9 115 aa4.66□□□□□ -1.66
COPS3-216ENST00000579716 RPL7L1Q6DKI1 246 aaKnown RBP4.66□□□□□ -1.66
COPS3-216ENST00000579716 CCL4L1Q8NHW4 92 aa4.66□□□□□ -1.66
COPS3-216ENST00000579716 ODF3Q96PU9 254 aa4.66□□□□□ -1.66
COPS3-216ENST00000579716 CLEC7AQ9BXN2 247 aa4.66□□□□□ -1.66
COPS3-216ENST00000579716 FGFBP2Q9BYJ0 223 aa4.66□□□□□ -1.66
COPS3-216ENST00000579716 ZNF71Q9NQZ8 489 aaPredicted RBP4.66□□□□□ -1.66
COPS3-216ENST00000579716 CELA1Q9UNI1 258 aa4.66□□□□□ -1.66
COPS3-216ENST00000579716 A0A087WW49 117 aa4.65□□□□□ -1.67
COPS3-216ENST00000579716 IGKV1-6A0A0C4DH72 117 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms