RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 NDFIP1Q9BT67 221 aa12.88□□□□□ -0.35
SREBF1-218ENST00000578469 TRAV8-2A0A0B4J237 113 aa12.87□□□□□ -0.35
SREBF1-218ENST00000578469 LINC01619G3V211 115 aa12.87□□□□□ -0.35
SREBF1-218ENST00000578469 M0QZ24 198 aa12.87□□□□□ -0.35
SREBF1-218ENST00000578469 TYMSP04818 313 aa12.87□□□□□ -0.35
SREBF1-218ENST00000578469 SYNJ2BPP57105 145 aa12.87□□□□□ -0.35
SREBF1-218ENST00000578469 TCF24Q7RTU0 167 aa12.87□□□□□ -0.35
SREBF1-218ENST00000578469 NRN1Q9NPD7 142 aa12.87□□□□□ -0.35
SREBF1-218ENST00000578469 TMEM213A2RRL7 107 aa12.86□□□□□ -0.35
SREBF1-218ENST00000578469 ZNF705FA8MVS1 300 aaPredicted RBP12.86□□□□□ -0.35
SREBF1-218ENST00000578469 NDUFA7O95182 113 aa12.86□□□□□ -0.35
SREBF1-218ENST00000578469 P01737 135 aa12.86□□□□□ -0.35
SREBF1-218ENST00000578469 CT45A10P0DMU9 189 aa12.86□□□□□ -0.35
SREBF1-218ENST00000578469 DEFA6Q01524 100 aa12.86□□□□□ -0.35
SREBF1-218ENST00000578469 RNF182Q8N6D2 247 aa12.86□□□□□ -0.35
SREBF1-218ENST00000578469 OR4B1Q8NGF8 309 aa12.86□□□□□ -0.35
SREBF1-218ENST00000578469 OR1N2Q8NGR9 330 aa12.86□□□□□ -0.35
SREBF1-218ENST00000578469 TRRAPQ9Y4A5 3859 aa12.86□□□□□ -0.35
SREBF1-218ENST00000578469 KLF5Q13887 457 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-218ENST00000578469 CT83Q5H943 113 aa12.85□□□□□ -0.35
SREBF1-218ENST00000578469 TCTEX1D4Q5JR98 221 aa12.85□□□□□ -0.35
SREBF1-218ENST00000578469 KLHL30-AS1Q8NEE0 82 aa12.85□□□□□ -0.35
SREBF1-218ENST00000578469 LINC01006Q8NI28 216 aa12.85□□□□□ -0.35
SREBF1-218ENST00000578469 WIPF2Q8TF74 440 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-218ENST00000578469 RPP21Q9H633 154 aaKnown RBP12.85□□□□□ -0.35
SREBF1-218ENST00000578469 SMIM27A0A1W2PRY6 76 aa12.84□□□□□ -0.35
SREBF1-218ENST00000578469 C19orf71A6NCJ1 209 aa12.84□□□□□ -0.35
SREBF1-218ENST00000578469 ID1P41134 155 aa12.84□□□□□ -0.35
SREBF1-218ENST00000578469 ZFP82Q8N141 532 aa12.84□□□□□ -0.35
SREBF1-218ENST00000578469 OR11H1Q8NG94 326 aa12.84□□□□□ -0.35
SREBF1-218ENST00000578469 VGLL1Q99990 258 aa12.84□□□□□ -0.35
SREBF1-218ENST00000578469 PEMTQ9UBM1 199 aa12.84□□□□□ -0.35
SREBF1-218ENST00000578469 A8MWL6 223 aa12.83□□□□□ -0.36
SREBF1-218ENST00000578469 SOCS3O14543 225 aa12.83□□□□□ -0.36
SREBF1-218ENST00000578469 OVOL1O14753 267 aa12.83□□□□□ -0.36
SREBF1-218ENST00000578469 TMEM78Q5T7P6 136 aa12.83□□□□□ -0.36
SREBF1-218ENST00000578469 C18orf65Q6ZTR6 163 aa12.83□□□□□ -0.36
SREBF1-218ENST00000578469 COX8CQ7Z4L0 72 aa12.83□□□□□ -0.36
SREBF1-218ENST00000578469 ZNF738Q8NE65 137 aa12.83□□□□□ -0.36
SREBF1-218ENST00000578469 TSKUQ8WUA8 353 aa12.83□□□□□ -0.36
SREBF1-218ENST00000578469 ZC2HC1AQ96GY0 325 aa12.83□□□□□ -0.36
SREBF1-218ENST00000578469 PRR25Q96S07 402 aa12.83□□□□□ -0.36
SREBF1-218ENST00000578469 C2orf70A6NJV1 201 aa12.82□□□□□ -0.36
SREBF1-218ENST00000578469 PRAC2D3DTV9 90 aa12.82□□□□□ -0.36
SREBF1-218ENST00000578469 TRGC2P03986 189 aa12.82□□□□□ -0.36
SREBF1-218ENST00000578469 S100A6P06703 90 aa12.82□□□□□ -0.36
SREBF1-218ENST00000578469 PRB4P10163 310 aaPredicted RBP12.82□□□□□ -0.36
SREBF1-218ENST00000578469 CBLN1P23435 193 aa12.82□□□□□ -0.36
SREBF1-218ENST00000578469 SLURP1P55000 103 aa12.82□□□□□ -0.36
SREBF1-218ENST00000578469 DEFB136Q30KP8 78 aa12.82□□□□□ -0.36
SREBF1-218ENST00000578469 COX19Q49B96 90 aa12.82□□□□□ -0.36
SREBF1-218ENST00000578469 LINC00322Q6ZN03 302 aaPredicted RBP12.82□□□□□ -0.36
SREBF1-218ENST00000578469 NAT8BQ9UHF3 227 aa12.82□□□□□ -0.36
SREBF1-218ENST00000578469 IGKV3-7A0A075B6H7 116 aa12.81□□□□□ -0.36
SREBF1-218ENST00000578469 IZUMO1RA6ND01 250 aa12.81□□□□□ -0.36
SREBF1-218ENST00000578469 NPIPB6E9PJ23 425 aa12.81□□□□□ -0.36
SREBF1-218ENST00000578469 ZNF138P52744 262 aa12.81□□□□□ -0.36
SREBF1-218ENST00000578469 TCL1AP56279 114 aa12.81□□□□□ -0.36
SREBF1-218ENST00000578469 SMUG1Q53HV7 270 aa12.81□□□□□ -0.36
SREBF1-218ENST00000578469 C9orf47Q6ZRZ4 202 aa12.81□□□□□ -0.36
SREBF1-218ENST00000578469 OR2D3Q8NGH3 330 aa12.81□□□□□ -0.36
SREBF1-218ENST00000578469 OR10J6PQ8NGY7 276 aa12.81□□□□□ -0.36
SREBF1-218ENST00000578469 C8orf49Q96NF6 230 aa12.81□□□□□ -0.36
SREBF1-218ENST00000578469 TSSC4Q9Y5U2 329 aaPredicted RBP12.81□□□□□ -0.36
SREBF1-218ENST00000578469 LOC105371267A0A1B0GV96 52 aa12.8□□□□□ -0.36
SREBF1-218ENST00000578469 CA1P00915 261 aaPredicted RBP12.8□□□□□ -0.36
SREBF1-218ENST00000578469 CD28P10747 220 aa12.8□□□□□ -0.36
SREBF1-218ENST00000578469 EDN2P20800 178 aa12.8□□□□□ -0.36
SREBF1-218ENST00000578469 ERCC8Q13216 396 aa12.8□□□□□ -0.36
SREBF1-218ENST00000578469 FAM162BQ5T6X4 162 aa12.8□□□□□ -0.36
SREBF1-218ENST00000578469 Q8TAT8 98 aa12.8□□□□□ -0.36
SREBF1-218ENST00000578469 GFRA4Q9GZZ7 299 aa12.8□□□□□ -0.36
SREBF1-218ENST00000578469 AGPAT4-IT1Q9H0P7 198 aa12.8□□□□□ -0.36
SREBF1-218ENST00000578469 RNF114Q9Y508 228 aa12.8□□□□□ -0.36
SREBF1-218ENST00000578469 FAM231BA6NCW3 169 aa12.79□□□□□ -0.36
SREBF1-218ENST00000578469 PAFAH1B2P68402 229 aa12.79□□□□□ -0.36
SREBF1-218ENST00000578469 WDR73Q6P4I2 378 aa12.79□□□□□ -0.36
SREBF1-218ENST00000578469 OR9G4Q8NGQ1 327 aa12.79□□□□□ -0.36
SREBF1-218ENST00000578469 C20orf173Q96LM9 149 aa12.79□□□□□ -0.36
SREBF1-218ENST00000578469 LINC00477Q96M19 166 aa12.79□□□□□ -0.36
SREBF1-218ENST00000578469 ASCL2Q99929 193 aa12.79□□□□□ -0.36
SREBF1-218ENST00000578469 PPP1R14DQ9NXH3 145 aa12.79□□□□□ -0.36
SREBF1-218ENST00000578469 TRAPPC1Q9Y5R8 145 aa12.79□□□□□ -0.36
SREBF1-218ENST00000578469 XKRY2A2RUG3 117 aa12.78□□□□□ -0.36
SREBF1-218ENST00000578469 ACTL10Q5JWF8 245 aa12.78□□□□□ -0.36
SREBF1-218ENST00000578469 WFDC3Q8IUB2 231 aa12.78□□□□□ -0.36
SREBF1-218ENST00000578469 NEU1Q99519 415 aa12.78□□□□□ -0.36
SREBF1-218ENST00000578469 MS4A6AQ9H2W1 248 aa12.78□□□□□ -0.36
SREBF1-218ENST00000578469 LENEPQ9Y5L5 61 aa12.78□□□□□ -0.36
SREBF1-218ENST00000578469 SH2D1AO60880 128 aa12.77□□□□□ -0.37
SREBF1-218ENST00000578469 CRIP1P50238 77 aa12.77□□□□□ -0.37
SREBF1-218ENST00000578469 RPS20P60866 119 aaKnown RBP12.77□□□□□ -0.37
SREBF1-218ENST00000578469 RASL11AQ6T310 242 aa12.77□□□□□ -0.37
SREBF1-218ENST00000578469 C11orf44Q8N8P7 122 aa12.77□□□□□ -0.37
SREBF1-218ENST00000578469 NUP35Q8NFH5 326 aa12.77□□□□□ -0.37
SREBF1-218ENST00000578469 DUX3Q96PT4 197 aa12.77□□□□□ -0.37
SREBF1-218ENST00000578469 CITED2Q99967 270 aaPredicted RBP12.77□□□□□ -0.37
SREBF1-218ENST00000578469 SAV1Q9H4B6 383 aaPredicted RBP12.77□□□□□ -0.37
SREBF1-218ENST00000578469 A0A1W2PRX2 142 aa12.76□□□□□ -0.37
SREBF1-218ENST00000578469 TMEM189A5PLL7 270 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms