RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	C9orf47	Q6ZRZ4	202 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	MIR17HG	Q75NE6	70 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	ZNF546	Q86UE3	836 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	OR10P1	Q8NGE3	313 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329		Q8TAT8	98 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	FXYD5	Q96DB9	178 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	PHYHIPL	Q96FC7	376 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	C20orf144	Q9BQM9	153 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	SLC50A1	Q9BRV3	221 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	TMEM208	Q9BTX3	173 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	WFDC1	Q9HC57	220 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	DNAJC4	Q9NNZ3	241 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	LYRM2	Q9NU23	88 aa	Predicted RBP	3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	OR5AC2	Q9NZP5	309 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	GSKIP	Q9P0R6	139 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	TMEM14C	Q9P0S9	112 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	MDFIC	Q9P1T7	246 aa		3.01	□□□□□ -1.93
PPP4R1-209	ENST00000578329	LOC100131303	A0A0U1RQF7	123 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	UBE2L5P	A0A1B0GUS4	154 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	C7orf71	A4D174	169 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	LRCOL1	A6NCL2	159 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	GOSR2	O14653	212 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	LYRM1	O43325	122 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	COX7A2P2	O60397	106 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	ZNF253	O75346	499 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	CRYBA4	P53673	196 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	TCL1A	P56279	114 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	H2BFS	P57053	126 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	KRTAP10-4	P60372	401 aa	Predicted RBP	3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	B2M	P61769	119 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	RPP30	P78346	268 aa	Known RBP	3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	HAMP	P81172	84 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	WFDC2	Q14508	124 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	ANXA2R	Q3ZCQ2	193 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	PXDC1	Q5TGL8	231 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	LYPD5	Q6UWN5	251 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	BPIFA4P	Q86YQ2	179 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	WFDC10B	Q8IUB3	73 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329		Q8N3U1	123 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	GNPNAT1	Q96EK6	184 aa	Predicted RBP	3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	MRPL53	Q96EL3	112 aa	Known RBP	3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	C2orf50	Q96LR7	162 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	NPCDR1	Q9BY65	106 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	SCRT2	Q9NQ03	307 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	NUDT15	Q9NV35	164 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	MRPL16	Q9NX20	251 aa	Known RBP	3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	C11orf21	Q9P2W6	132 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	MGAT4C	Q9UBM8	478 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329		Q9UF83	564 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	PFDN2	Q9UHV9	154 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	LSM5	Q9Y4Y9	91 aa	Known RBP	3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	PXMP4	Q9Y6I8	212 aa		3	□□□□□ -1.93
PPP4R1-209	ENST00000578329	LRP1	Q07954	4544 aa	Known RBP	3	□□□□□ -1.93
PPP4R1-209	ENST00000578329		A0A087WTM6	91 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329		A0A1W2PPQ1	181 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	NXPH4	O95158	308 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	IGHV3-53	P01767	116 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	SLC25A5	P05141	298 aa	Known RBP	2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	SFTA3	P0C7M3	94 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	HIST1H1E	P10412	219 aa	Known RBP	2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	S100A5	P33763	92 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	RNASE4	P34096	147 aa	Known RBP	2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	SULT1A1	P50225	295 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	CCL18	P55774	89 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	ICAM4	Q14773	271 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	SPANXN2	Q5MJ10	180 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	DPPA3	Q6W0C5	159 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	LYPD1	Q8N2G4	141 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	C12orf45	Q8N5I9	185 aa	Predicted RBP	2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	THAP6	Q8TBB0	222 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	ZNF479	Q96JC4	524 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	ST6GAL2	Q96JF0	529 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	C8orf49	Q96NF6	230 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	PYGO2	Q9BRQ0	406 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	ATG101	Q9BSB4	218 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	UQCC1	Q9NVA1	299 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	FAM30A	Q9NZY2	134 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	ZNF492	Q9P255	531 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	FUT9	Q9Y231	359 aa		2.99	□□□□□ -1.93
PPP4R1-209	ENST00000578329	HMCN2	Q8NDA2	5059 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	TRGV1	A0A0A0MS02	117 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	PIGBOS1	A0A0B4J2F0	54 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	GNRH2	O43555	120 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	PRAF2	O60831	178 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	IGLV2-11	P01706	119 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	RLN2	P04090	185 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	H2AFB2	P0C5Z0	115 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	OR10J4	P0C629	311 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	NBEAP1	P0C6P0	100 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	FGF7	P21781	194 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	LEP	P41159	167 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	ZNF80	P51504	273 aa	Predicted RBP	2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	CAV2	P51636	162 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	ASAH1	Q13510	395 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	ZNF266	Q14584	549 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	GUK1	Q16774	197 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	SOHLH1	Q5JUK2	328 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	IBA57	Q5T440	356 aa	Known RBP	2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	TRIQK	Q629K1	86 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	FAM122C	Q6P4D5	195 aa		2.98	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms