RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TMEM14CQ9P0S9 112 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 SOX21Q9Y651 276 aaPredicted RBP4.18□□□□□ -1.74
VAPA-203ENST00000577539 TRAV30A0A087WSZ9 112 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 hDV102S1A0JD36 115 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 TMEM189A5PLL7 270 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 LY6LH3BQJ8 138 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 APOHP02749 345 aaPredicted RBP4.18□□□□□ -1.74
VAPA-203ENST00000577539 IGLL1P15814 213 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 GPR183P32249 361 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 NDPQ00604 133 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 KLF5Q13887 457 aaPredicted RBP4.18□□□□□ -1.74
VAPA-203ENST00000577539 PSG3Q16557 428 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 SIGLEC15Q6ZMC9 328 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 IGHV1-24A0A0C4DH33 117 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 PRYO14603 147 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 ORM1P02763 201 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 NPSP0C0P6 89 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 UNQ5815/PRO19632Q6UWF5 114 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 Q6ZVH6 145 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 LRRC75A-AS1Q8N1F1 130 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 DYNAPQ8N1N2 210 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 STPG4Q8N801 248 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 ZNF414Q96IQ9 312 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 MAP1LC3CQ9BXW4 147 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 TMEM191AQ9H0A3 160 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 TP73-AS1Q9UF72 201 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 ZFP30Q9Y2G7 519 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 CREBBPQ92793 2442 aa4.18□□□□□ -1.74
VAPA-203ENST00000577539 IGHV3OR16-10A0A075B7F0 116 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 DLEU1O43261 78 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 ZNF207O43670 478 aaKnown RBP4.17□□□□□ -1.74
VAPA-203ENST00000577539 IGLV2-11P01706 119 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 RPL7P18124 248 aaKnown RBP4.17□□□□□ -1.74
VAPA-203ENST00000577539 HLA-DMBP28068 263 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 TSPOP30536 169 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 CTRLP40313 264 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 ZNF562Q6V9R5 426 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 OR11H6Q8NGC7 330 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 OR8A1Q8NGG7 326 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 NEU4Q8WWR8 484 aaPredicted RBP4.17□□□□□ -1.74
VAPA-203ENST00000577539 TRAV25A0A0B4J276 109 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 TMEM213A2RRL7 107 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 C2orf70A6NJV1 201 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 SYS1-DBNDD2H3BUS1 97 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 TCF21O43680 179 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 OR5AL1P0C617 328 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 FXYD7P58549 80 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 LY6DQ14210 128 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 ERASQ7Z444 233 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 LY6G5BQ8NDX9 201 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 URB1-AS1Q96HZ7 61 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 GFRA4Q9GZZ7 299 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 RABAC1Q9UI14 185 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 KALRNO60229 2985 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 M0R1W7 72 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 SNAI2O43623 268 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 LYZL1Q6UWQ5 148 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 SPATA12Q7Z6I5 190 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 CHCHD1Q96BP2 118 aaKnown RBP4.17□□□□□ -1.74
VAPA-203ENST00000577539 CSPG4Q6UVK1 2322 aa4.17□□□□□ -1.74
VAPA-203ENST00000577539 IGLV11-55A0A075B6I3 123 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 USP17L23D6RBM5 183 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 SH2D1AO60880 128 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 FAM106CPP0CH98 169 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 TWIST1Q15672 202 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 FAM120AOSQ5T036 256 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 SERTAD4-AS1Q5TG53 156 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 TMEM75Q8N9X5 138 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 C1RLQ9NZP8 487 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 HSPB8Q9UJY1 196 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 A1L4Q6 167 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 FAM231BA6NCW3 169 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 CRIP1P50238 77 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 UCNP55089 124 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 C15orf32Q32M92 178 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 FBXL19-AS1Q494R0 122 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 AMN1Q8IY45 258 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 NPBQ8NG41 125 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 NDFIP1Q9BT67 221 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 LINC00527Q9UJ94 153 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 LRBAP50851 2863 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 D6R8Y8 96 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 SMKR1H3BMG3 65 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 NDUFA3O95167 84 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 RHOGP84095 191 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 PSG9Q00887 426 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 CLEC19AQ6UXS0 136 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 LYPD1Q8N2G4 141 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 PRELID3AQ96N28 172 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 CACNA1AO00555 2505 aa4.16□□□□□ -1.74
VAPA-203ENST00000577539 WI2-2373I1.2A0A1W2PRP0 233 aa4.15□□□□□ -1.74
VAPA-203ENST00000577539 NPIPB6E9PJ23 425 aa4.15□□□□□ -1.74
VAPA-203ENST00000577539 G3V318 75 aa4.15□□□□□ -1.74
VAPA-203ENST00000577539 NCR2O95944 276 aa4.15□□□□□ -1.74
VAPA-203ENST00000577539 NUDT3O95989 172 aa4.15□□□□□ -1.74
VAPA-203ENST00000577539 CKS2P33552 79 aa4.15□□□□□ -1.74
VAPA-203ENST00000577539 IFI27P40305 119 aaPredicted RBP4.15□□□□□ -1.74
VAPA-203ENST00000577539 NHLH1Q02575 133 aa4.15□□□□□ -1.74
VAPA-203ENST00000577539 PAX2Q02962 417 aa4.15□□□□□ -1.74
VAPA-203ENST00000577539 SLC25A34Q6PIV7 304 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms