RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ZNF705DP0CH99 300 aaPredicted RBP5.82□□□□□ -1.48
CCDC40-215ENST00000576033 ZNF705BP0CI00 300 aaPredicted RBP5.82□□□□□ -1.48
CCDC40-215ENST00000576033 HIST1H1EP10412 219 aaKnown RBP5.82□□□□□ -1.48
CCDC40-215ENST00000576033 OR8I2Q8N0Y5 310 aa5.82□□□□□ -1.48
CCDC40-215ENST00000576033 HIST1H2BAQ96A08 127 aa5.82□□□□□ -1.48
CCDC40-215ENST00000576033 ISOC2Q96AB3 205 aa5.82□□□□□ -1.48
CCDC40-215ENST00000576033 GRAMD2BQ96HH9 432 aa5.82□□□□□ -1.48
CCDC40-215ENST00000576033 IGF2BP2-AS1Q96M15 143 aa5.82□□□□□ -1.48
CCDC40-215ENST00000576033 LYSTQ99698 3801 aa5.82□□□□□ -1.48
CCDC40-215ENST00000576033 NRN1Q9NPD7 142 aa5.82□□□□□ -1.48
CCDC40-215ENST00000576033 ZMAT5Q9UDW3 170 aaKnown RBP5.82□□□□□ -1.48
CCDC40-215ENST00000576033 PRELID1Q9Y255 219 aa5.82□□□□□ -1.48
CCDC40-215ENST00000576033 HELTA6NFD8 242 aa5.81□□□□□ -1.48
CCDC40-215ENST00000576033 MT-ND4LP03901 98 aa5.81□□□□□ -1.48
CCDC40-215ENST00000576033 NBEAP1P0C6P0 100 aa5.81□□□□□ -1.48
CCDC40-215ENST00000576033 BMI1P35226 326 aa5.81□□□□□ -1.48
CCDC40-215ENST00000576033 RPL35P42766 123 aaKnown RBP5.81□□□□□ -1.48
CCDC40-215ENST00000576033 FXYD7P58549 80 aa5.81□□□□□ -1.48
CCDC40-215ENST00000576033 TAS2R60P59551 318 aa5.81□□□□□ -1.48
CCDC40-215ENST00000576033 SUMO1P63165 101 aaKnown RBP5.81□□□□□ -1.48
CCDC40-215ENST00000576033 ZNF674Q2M3X9 581 aa5.81□□□□□ -1.48
CCDC40-215ENST00000576033 DEFB135Q30KP9 77 aa5.81□□□□□ -1.48
CCDC40-215ENST00000576033 RNF212Q495C1 297 aa5.81□□□□□ -1.48
CCDC40-215ENST00000576033 ACTL10Q5JWF8 245 aa5.81□□□□□ -1.48
CCDC40-215ENST00000576033 S100A7AQ86SG5 101 aa5.81□□□□□ -1.48
CCDC40-215ENST00000576033 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.81□□□□□ -1.48
CCDC40-215ENST00000576033 TM2D3Q9BRN9 247 aa5.81□□□□□ -1.48
CCDC40-215ENST00000576033 PYGO2Q9BRQ0 406 aa5.81□□□□□ -1.48
CCDC40-215ENST00000576033 ZNF586Q9NXT0 402 aa5.81□□□□□ -1.48
CCDC40-215ENST00000576033 KLF12Q9Y4X4 402 aa5.81□□□□□ -1.48
CCDC40-215ENST00000576033 TRBV19A0A075B6N1 114 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 TRBV24-1A0A075B6N3 115 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 LOC102724200A0A096LPH7 203 aaPredicted RBP5.8□□□□□ -1.48
CCDC40-215ENST00000576033 TRBV6-1A0A0K0K1D8 114 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 A8MZ25 164 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 PRAC2D3DTV9 90 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 PEX7O00628 323 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 IGLV2-8P01709 118 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 PFN1P07737 140 aaKnown RBP5.8□□□□□ -1.48
CCDC40-215ENST00000576033 GIG44P09565 113 aaPredicted RBP5.8□□□□□ -1.48
CCDC40-215ENST00000576033 PAFAH1B2P68402 229 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 PDE6HQ13956 83 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 ELOBQ15370 118 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 ADIRFQ15847 76 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 BPIFA4PQ86YQ2 179 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 LYPD1Q8N2G4 141 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 ARL6IP6Q8N6S5 226 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 C5orf17Q8NAS9 161 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 OCC1Q8TAD7 63 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 ANAPC16Q96DE5 110 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 SMIM12Q96EX1 92 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 C16orf92Q96LL3 132 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 OTORQ9NRC9 128 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 CLEC5AQ9NY25 188 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 RNF24Q9Y225 148 aa5.8□□□□□ -1.48
CCDC40-215ENST00000576033 TMA7Q9Y2S6 64 aaKnown RBP5.8□□□□□ -1.48
CCDC40-215ENST00000576033 A0A087X0K7 114 aa5.79□□□□□ -1.48
CCDC40-215ENST00000576033 TRAV2A0A0B4J234 112 aa5.79□□□□□ -1.48
CCDC40-215ENST00000576033 ZNF705FA8MVS1 300 aaPredicted RBP5.79□□□□□ -1.48
CCDC40-215ENST00000576033 K7EN84 100 aa5.79□□□□□ -1.48
CCDC40-215ENST00000576033 ZNF253O75346 499 aa5.79□□□□□ -1.48
CCDC40-215ENST00000576033 CA1P00915 261 aaPredicted RBP5.79□□□□□ -1.48
CCDC40-215ENST00000576033 GCGP01275 180 aa5.79□□□□□ -1.48
CCDC40-215ENST00000576033 ATF4P18848 351 aaPredicted RBP5.79□□□□□ -1.48
CCDC40-215ENST00000576033 RAB5AP20339 215 aa5.79□□□□□ -1.48
CCDC40-215ENST00000576033 GALR1P47211 349 aa5.79□□□□□ -1.48
CCDC40-215ENST00000576033 TMEM183BQ1AE95 376 aa5.79□□□□□ -1.48
CCDC40-215ENST00000576033 CENPWQ5EE01 88 aa5.79□□□□□ -1.48
CCDC40-215ENST00000576033 C1orf194Q5T5A4 169 aa5.79□□□□□ -1.48
CCDC40-215ENST00000576033 TRPT1Q86TN4 253 aaKnown RBP5.79□□□□□ -1.48
CCDC40-215ENST00000576033 RCHY1Q96PM5 261 aa5.79□□□□□ -1.48
CCDC40-215ENST00000576033 IMMP2LQ96T52 175 aa5.79□□□□□ -1.48
CCDC40-215ENST00000576033 Q9H3A6 140 aa5.79□□□□□ -1.48
CCDC40-215ENST00000576033 EPDR1Q9UM22 224 aa5.79□□□□□ -1.48
CCDC40-215ENST00000576033 LOC105371267A0A1B0GV96 52 aa5.78□□□□□ -1.48
CCDC40-215ENST00000576033 PGPEP1LA6NFU8 196 aa5.78□□□□□ -1.48
CCDC40-215ENST00000576033 H7BYZ3 331 aa5.78□□□□□ -1.48
CCDC40-215ENST00000576033 M0R3E3 92 aa5.78□□□□□ -1.48
CCDC40-215ENST00000576033 PPP1R2P9O14990 202 aa5.78□□□□□ -1.48
CCDC40-215ENST00000576033 IGLV2-11P01706 119 aa5.78□□□□□ -1.48
CCDC40-215ENST00000576033 TCRAP04437 139 aa5.78□□□□□ -1.48
CCDC40-215ENST00000576033 TYMSP04818 313 aa5.78□□□□□ -1.48
CCDC40-215ENST00000576033 S100A9P06702 114 aaKnown RBP5.78□□□□□ -1.48
CCDC40-215ENST00000576033 CXCL1P09341 107 aa5.78□□□□□ -1.48
CCDC40-215ENST00000576033 RPL7P18124 248 aaKnown RBP5.78□□□□□ -1.48
CCDC40-215ENST00000576033 S100A7P31151 101 aa5.78□□□□□ -1.48
CCDC40-215ENST00000576033 CNN1P51911 297 aaKnown RBP5.78□□□□□ -1.48
CCDC40-215ENST00000576033 RANP62826 216 aaKnown RBP5.78□□□□□ -1.48
CCDC40-215ENST00000576033 BLNKQ8WV28 456 aa5.78□□□□□ -1.48
CCDC40-215ENST00000576033 SFRP2Q96HF1 295 aa5.78□□□□□ -1.48
CCDC40-215ENST00000576033 OVOL2Q9BRP0 275 aa5.78□□□□□ -1.48
CCDC40-215ENST00000576033 ATG101Q9BSB4 218 aa5.78□□□□□ -1.48
CCDC40-215ENST00000576033 MLST8Q9BVC4 326 aa5.78□□□□□ -1.48
CCDC40-215ENST00000576033 OSTCQ9NRP0 149 aa5.78□□□□□ -1.48
CCDC40-215ENST00000576033 U3KQK5 164 aa5.78□□□□□ -1.48
CCDC40-215ENST00000576033 PLECQ15149 4684 aaKnown RBP5.78□□□□□ -1.48
CCDC40-215ENST00000576033 PGPA6NDG6 321 aa5.77□□□□□ -1.49
CCDC40-215ENST00000576033 H3BMM0 161 aa5.77□□□□□ -1.49
CCDC40-215ENST00000576033 ISLRO14498 428 aa5.77□□□□□ -1.49
CCDC40-215ENST00000576033 PHOX2AO14813 284 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms