RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 SLC25A5P05141 298 aaKnown RBP13.83□□□□□ -0.2
SCARF1-208ENST00000574545 ATP5G1P05496 136 aa13.83□□□□□ -0.2
SCARF1-208ENST00000574545 CRISP2P16562 243 aa13.83□□□□□ -0.2
SCARF1-208ENST00000574545 ATP5G3P48201 142 aa13.83□□□□□ -0.2
SCARF1-208ENST00000574545 RNF212Q495C1 297 aa13.83□□□□□ -0.2
SCARF1-208ENST00000574545 C15orf53Q8NAA6 179 aa13.83□□□□□ -0.2
SCARF1-208ENST00000574545 AAMDCQ9H7C9 122 aa13.83□□□□□ -0.2
SCARF1-208ENST00000574545 HERC2O95714 4834 aa13.83□□□□□ -0.2
SCARF1-208ENST00000574545 PKHD1P08F94 4074 aa13.82□□□□□ -0.2
SCARF1-208ENST00000574545 PTTG1O95997 202 aa13.82□□□□□ -0.2
SCARF1-208ENST00000574545 OR10J4P0C629 311 aa13.82□□□□□ -0.2
SCARF1-208ENST00000574545 FFAR4Q5NUL3 377 aa13.82□□□□□ -0.2
SCARF1-208ENST00000574545 PHYHIPLQ96FC7 376 aa13.82□□□□□ -0.2
SCARF1-208ENST00000574545 VGLL1Q99990 258 aa13.82□□□□□ -0.2
SCARF1-208ENST00000574545 PYGO2Q9BRQ0 406 aa13.82□□□□□ -0.2
SCARF1-208ENST00000574545 NACAE9PAV3 2078 aa13.81□□□□□ -0.2
SCARF1-208ENST00000574545 C7orf71A4D174 169 aa13.81□□□□□ -0.2
SCARF1-208ENST00000574545 IFNA5P01569 189 aa13.81□□□□□ -0.2
SCARF1-208ENST00000574545 CD300CQ08708 224 aa13.81□□□□□ -0.2
SCARF1-208ENST00000574545 LGALS9BQ3B8N2 356 aa13.81□□□□□ -0.2
SCARF1-208ENST00000574545 FAM122CQ6P4D5 195 aa13.81□□□□□ -0.2
SCARF1-208ENST00000574545 CCDC28AQ8IWP9 274 aa13.81□□□□□ -0.2
SCARF1-208ENST00000574545 SCGB1C1Q8TD33 95 aa13.81□□□□□ -0.2
SCARF1-208ENST00000574545 LINC00467Q9BRT7 94 aa13.81□□□□□ -0.2
SCARF1-208ENST00000574545 IGKV2-40A0A087WW87 121 aaPredicted RBP13.8□□□□□ -0.2
SCARF1-208ENST00000574545 F5H768 121 aa13.8□□□□□ -0.2
SCARF1-208ENST00000574545 IGKV2D-40P01614 121 aaPredicted RBP13.8□□□□□ -0.2
SCARF1-208ENST00000574545 NMBP08949 121 aa13.8□□□□□ -0.2
SCARF1-208ENST00000574545 ZFAND2AQ8N6M9 145 aa13.8□□□□□ -0.2
SCARF1-208ENST00000574545 ZNF492Q9P255 531 aa13.8□□□□□ -0.2
SCARF1-208ENST00000574545 OR7C2O60412 319 aa13.79□□□□□ -0.2
SCARF1-208ENST00000574545 DAZ2Q13117 558 aaKnown RBP13.79□□□□□ -0.2
SCARF1-208ENST00000574545 BTN1A1Q13410 526 aa13.79□□□□□ -0.2
SCARF1-208ENST00000574545 Q6ZR54 194 aa13.79□□□□□ -0.2
SCARF1-208ENST00000574545 LYPD1Q8N2G4 141 aa13.79□□□□□ -0.2
SCARF1-208ENST00000574545 EIF3GO75821 320 aaKnown RBP eCLIP13.78□□□□□ -0.2
SCARF1-208ENST00000574545 RANP62826 216 aaKnown RBP13.78□□□□□ -0.2
SCARF1-208ENST00000574545 PRR9Q5T870 116 aa13.78□□□□□ -0.2
SCARF1-208ENST00000574545 UBE2DNLQ8IWF7 75 aa13.78□□□□□ -0.2
SCARF1-208ENST00000574545 C11orf72Q8NBR9 251 aa13.78□□□□□ -0.2
SCARF1-208ENST00000574545 SNURFLB1AK76 121 aa13.77□□□□□ -0.21
SCARF1-208ENST00000574545 M0R2N4 97 aa13.77□□□□□ -0.21
SCARF1-208ENST00000574545 RTL8CO15255 209 aa13.77□□□□□ -0.21
SCARF1-208ENST00000574545 ANXA2RQ3ZCQ2 193 aa13.77□□□□□ -0.21
SCARF1-208ENST00000574545 TMEM78Q5T7P6 136 aa13.77□□□□□ -0.21
SCARF1-208ENST00000574545 Q9H3A6 140 aa13.77□□□□□ -0.21
SCARF1-208ENST00000574545 TRBV7-9A0A0J9YWB2 115 aa13.76□□□□□ -0.21
SCARF1-208ENST00000574545 RBAKDNA6NC62 111 aa13.76□□□□□ -0.21
SCARF1-208ENST00000574545 GPX1P07203 203 aa13.76□□□□□ -0.21
SCARF1-208ENST00000574545 M6PRP20645 277 aa13.76□□□□□ -0.21
SCARF1-208ENST00000574545 RNASE4P34096 147 aaKnown RBP13.76□□□□□ -0.21
SCARF1-208ENST00000574545 UBE2L3P68036 154 aaKnown RBP13.76□□□□□ -0.21
SCARF1-208ENST00000574545 KHDC3LQ587J8 217 aa13.76□□□□□ -0.21
SCARF1-208ENST00000574545 Q5BKY6 102 aa13.76□□□□□ -0.21
SCARF1-208ENST00000574545 Q6ZQT7 251 aa13.76□□□□□ -0.21
SCARF1-208ENST00000574545 LINC00336Q6ZUF6 198 aa13.76□□□□□ -0.21
SCARF1-208ENST00000574545 EIF4E3Q8N5X7 224 aaKnown RBP13.76□□□□□ -0.21
SCARF1-208ENST00000574545 MED28Q9H204 178 aa13.76□□□□□ -0.21
SCARF1-208ENST00000574545 KIAA1109Q2LD37 5005 aa13.76□□□□□ -0.21
SCARF1-208ENST00000574545 IGLV2-18A0A075B6J9 118 aa13.75□□□□□ -0.21
SCARF1-208ENST00000574545 GAGE12BA1L429 117 aa13.75□□□□□ -0.21
SCARF1-208ENST00000574545 GAGE7O76087 117 aa13.75□□□□□ -0.21
SCARF1-208ENST00000574545 GAGE12FP0CL80 117 aa13.75□□□□□ -0.21
SCARF1-208ENST00000574545 GAGE12GP0CL81 117 aa13.75□□□□□ -0.21
SCARF1-208ENST00000574545 GAGE12IP0CL82 117 aa13.75□□□□□ -0.21
SCARF1-208ENST00000574545 HOXA5P20719 270 aa13.75□□□□□ -0.21
SCARF1-208ENST00000574545 ZNF138P52744 262 aa13.75□□□□□ -0.21
SCARF1-208ENST00000574545 TAS2R45P59539 299 aa13.75□□□□□ -0.21
SCARF1-208ENST00000574545 AQP10Q96PS8 301 aa13.75□□□□□ -0.21
SCARF1-208ENST00000574545 GSN-AS1Q9NRJ2 163 aa13.75□□□□□ -0.21
SCARF1-208ENST00000574545 A0A1B0GVY2 172 aa13.74□□□□□ -0.21
SCARF1-208ENST00000574545 FAM3BP58499 235 aaPredicted RBP13.74□□□□□ -0.21
SCARF1-208ENST00000574545 RAB2AP61019 212 aa13.74□□□□□ -0.21
SCARF1-208ENST00000574545 ACOT6Q3I5F7 207 aaPredicted RBP13.74□□□□□ -0.21
SCARF1-208ENST00000574545 Q6ZTI0 123 aa13.74□□□□□ -0.21
SCARF1-208ENST00000574545 ZNF680Q8NEM1 530 aa13.74□□□□□ -0.21
SCARF1-208ENST00000574545 C18orf15Q96N68 181 aa13.74□□□□□ -0.21
SCARF1-208ENST00000574545 DIRC3C9JPN6 131 aa13.73□□□□□ -0.21
SCARF1-208ENST00000574545 NUDT3O95989 172 aa13.73□□□□□ -0.21
SCARF1-208ENST00000574545 CSN1S1P47710 185 aa13.73□□□□□ -0.21
SCARF1-208ENST00000574545 Q8TAT8 98 aa13.73□□□□□ -0.21
SCARF1-208ENST00000574545 OR5I1Q13606 314 aa13.72□□□□□ -0.21
SCARF1-208ENST00000574545 PQLC2Q6ZP29 291 aa13.72□□□□□ -0.21
SCARF1-208ENST00000574545 OR2G3Q8NGZ4 309 aa13.72□□□□□ -0.21
SCARF1-208ENST00000574545 ZNRF2Q8NHG8 242 aa13.72□□□□□ -0.21
SCARF1-208ENST00000574545 RXFP4Q8TDU9 374 aa13.72□□□□□ -0.21
SCARF1-208ENST00000574545 OTORQ9NRC9 128 aa13.72□□□□□ -0.21
SCARF1-208ENST00000574545 TP53TG3Q9ULZ0 132 aa13.72□□□□□ -0.21
SCARF1-208ENST00000574545 KLF12Q9Y4X4 402 aa13.72□□□□□ -0.21
SCARF1-208ENST00000574545 IGHV1OR15-1A0A075B7D0 117 aa13.71□□□□□ -0.21
SCARF1-208ENST00000574545 TRAV26-1A0A087WT03 109 aa13.71□□□□□ -0.21
SCARF1-208ENST00000574545 SPINK4O60575 86 aa13.71□□□□□ -0.21
SCARF1-208ENST00000574545 GIPP09681 153 aaPredicted RBP13.71□□□□□ -0.21
SCARF1-208ENST00000574545 TCL1AP56279 114 aa13.71□□□□□ -0.21
SCARF1-208ENST00000574545 ZNF266Q14584 549 aa13.71□□□□□ -0.21
SCARF1-208ENST00000574545 IBA57Q5T440 356 aaKnown RBP13.71□□□□□ -0.21
SCARF1-208ENST00000574545 OR10G4Q8NGN3 311 aa13.71□□□□□ -0.21
SCARF1-208ENST00000574545 OR10G9Q8NGN4 311 aa13.71□□□□□ -0.21
SCARF1-208ENST00000574545 OR10G7Q8NGN6 311 aa13.71□□□□□ -0.21
SCARF1-208ENST00000574545 A0A1W2PPV4 95 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms