RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 PGPA6NDG6 321 aa8.01□□□□□ -1.13
CHD3-216ENST00000573936 SMIM9A6NGZ8 99 aa8.01□□□□□ -1.13
CHD3-216ENST00000573936 PRAC2D3DTV9 90 aa8.01□□□□□ -1.13
CHD3-216ENST00000573936 NPIPB6E9PJ23 425 aa8.01□□□□□ -1.13
CHD3-216ENST00000573936 M0R3E3 92 aa8.01□□□□□ -1.13
CHD3-216ENST00000573936 INSP01308 110 aa8.01□□□□□ -1.13
CHD3-216ENST00000573936 GCHFRP30047 84 aa8.01□□□□□ -1.13
CHD3-216ENST00000573936 CDKN1BP46527 198 aa8.01□□□□□ -1.13
CHD3-216ENST00000573936 SPINK13Q1W4C9 94 aa8.01□□□□□ -1.13
CHD3-216ENST00000573936 CMTM2Q8TAZ6 248 aa8.01□□□□□ -1.13
CHD3-216ENST00000573936 SUN5Q8TC36 379 aa8.01□□□□□ -1.13
CHD3-216ENST00000573936 MBD3L1Q8WWY6 194 aa8.01□□□□□ -1.13
CHD3-216ENST00000573936 NEU1Q99519 415 aa8.01□□□□□ -1.13
CHD3-216ENST00000573936 MAP1LC3BQ9GZQ8 125 aa8.01□□□□□ -1.13
CHD3-216ENST00000573936 C11orf68Q9H3H3 251 aaKnown RBP8.01□□□□□ -1.13
CHD3-216ENST00000573936 OTORQ9NRC9 128 aa8.01□□□□□ -1.13
CHD3-216ENST00000573936 A0A0J9YWU9 116 aa8□□□□□ -1.13
CHD3-216ENST00000573936 RBAKDNA6NC62 111 aa8□□□□□ -1.13
CHD3-216ENST00000573936 SLC25A5P05141 298 aaKnown RBP8□□□□□ -1.13
CHD3-216ENST00000573936 LEPP41159 167 aa8□□□□□ -1.13
CHD3-216ENST00000573936 FGF8P55075 233 aaPredicted RBP8□□□□□ -1.13
CHD3-216ENST00000573936 TMEM78Q5T7P6 136 aa8□□□□□ -1.13
CHD3-216ENST00000573936 ZNF705AQ6ZN79 300 aaPredicted RBP8□□□□□ -1.13
CHD3-216ENST00000573936 C9orf47Q6ZRZ4 202 aa8□□□□□ -1.13
CHD3-216ENST00000573936 ZNF767PQ75MW2 155 aa8□□□□□ -1.13
CHD3-216ENST00000573936 PCNPQ8WW12 178 aaKnown RBP8□□□□□ -1.13
CHD3-216ENST00000573936 C20orf144Q9BQM9 153 aa8□□□□□ -1.13
CHD3-216ENST00000573936 M0R2Z0 102 aa7.99□□□□□ -1.13
CHD3-216ENST00000573936 H2AFB1P0C5Y9 115 aa7.99□□□□□ -1.13
CHD3-216ENST00000573936 CT45A10P0DMU9 189 aa7.99□□□□□ -1.13
CHD3-216ENST00000573936 BLOC1S1P78537 153 aa7.99□□□□□ -1.13
CHD3-216ENST00000573936 ERCC8Q13216 396 aa7.99□□□□□ -1.13
CHD3-216ENST00000573936 IQCF2Q8IXL9 164 aa7.99□□□□□ -1.13
CHD3-216ENST00000573936 TMEM256Q8N2U0 113 aa7.99□□□□□ -1.13
CHD3-216ENST00000573936 SFT2D1Q8WV19 159 aa7.99□□□□□ -1.13
CHD3-216ENST00000573936 TMEM208Q9BTX3 173 aa7.99□□□□□ -1.13
CHD3-216ENST00000573936 X6R8D5 127 aa7.99□□□□□ -1.13
CHD3-216ENST00000573936 AGRNO00468 2067 aa7.99□□□□□ -1.13
CHD3-216ENST00000573936 IGHV3OR16-12A0A075B7B8 117 aa7.98□□□□□ -1.13
CHD3-216ENST00000573936 TRAV1-1A0A0B4J248 108 aa7.98□□□□□ -1.13
CHD3-216ENST00000573936 IGHV4-28A0A0C4DH34 117 aa7.98□□□□□ -1.13
CHD3-216ENST00000573936 TRBV7-9A0A0J9YWB2 115 aa7.98□□□□□ -1.13
CHD3-216ENST00000573936 A0A1B0GV50 99 aa7.98□□□□□ -1.13
CHD3-216ENST00000573936 SERTM2A0A1B0GWG4 89 aa7.98□□□□□ -1.13
CHD3-216ENST00000573936 A0A1W2PRE2 83 aa7.98□□□□□ -1.13
CHD3-216ENST00000573936 TMEM189A5PLL7 270 aa7.98□□□□□ -1.13
CHD3-216ENST00000573936 DIRC3C9JPN6 131 aa7.98□□□□□ -1.13
CHD3-216ENST00000573936 RGS13O14921 159 aa7.98□□□□□ -1.13
CHD3-216ENST00000573936 CRXO43186 299 aaPredicted RBP7.98□□□□□ -1.13
CHD3-216ENST00000573936 HBE1P02100 147 aa7.98□□□□□ -1.13
CHD3-216ENST00000573936 NMBP08949 121 aa7.98□□□□□ -1.13
CHD3-216ENST00000573936 PRB4P10163 310 aaPredicted RBP7.98□□□□□ -1.13
CHD3-216ENST00000573936 C1orf158Q8N1D5 194 aa7.98□□□□□ -1.13
CHD3-216ENST00000573936 Q8NAQ8 132 aa7.98□□□□□ -1.13
CHD3-216ENST00000573936 NKX6-2Q9C056 277 aaPredicted RBP7.98□□□□□ -1.13
CHD3-216ENST00000573936 AGPAT4-IT1Q9H0P7 198 aa7.98□□□□□ -1.13
CHD3-216ENST00000573936 TMPRSS5Q9H3S3 457 aa7.98□□□□□ -1.13
CHD3-216ENST00000573936 TRAV12-2A0A075B6T6 113 aa7.97□□□□□ -1.13
CHD3-216ENST00000573936 IGKV2-40A0A087WW87 121 aaPredicted RBP7.97□□□□□ -1.13
CHD3-216ENST00000573936 K7EQM0 130 aa7.97□□□□□ -1.13
CHD3-216ENST00000573936 IGKV2D-40P01614 121 aaPredicted RBP7.97□□□□□ -1.13
CHD3-216ENST00000573936 ZNF138P52744 262 aa7.97□□□□□ -1.13
CHD3-216ENST00000573936 CCL20P78556 96 aa7.97□□□□□ -1.13
CHD3-216ENST00000573936 RRN3P1Q2M238 152 aa7.97□□□□□ -1.13
CHD3-216ENST00000573936 C5orf17Q8NAS9 161 aa7.97□□□□□ -1.13
CHD3-216ENST00000573936 ZNF492Q9P255 531 aa7.97□□□□□ -1.13
CHD3-216ENST00000573936 LENEPQ9Y5L5 61 aa7.97□□□□□ -1.13
CHD3-216ENST00000573936 RBMY1A1P0DJD3 496 aaKnown RBP7.96□□□□□ -1.14
CHD3-216ENST00000573936 RBMY1CP0DJD4 496 aa7.96□□□□□ -1.14
CHD3-216ENST00000573936 CRISP2P16562 243 aa7.96□□□□□ -1.14
CHD3-216ENST00000573936 SUMO1P63165 101 aaKnown RBP7.96□□□□□ -1.14
CHD3-216ENST00000573936 RBMY1FQ15415 496 aaKnown RBP7.96□□□□□ -1.14
CHD3-216ENST00000573936 LYPD6BQ8NI32 183 aa7.96□□□□□ -1.14
CHD3-216ENST00000573936 FAM19A4Q96LR4 140 aa7.96□□□□□ -1.14
CHD3-216ENST00000573936 LINC01587Q99440 93 aa7.96□□□□□ -1.14
CHD3-216ENST00000573936 VGLL1Q99990 258 aa7.96□□□□□ -1.14
CHD3-216ENST00000573936 NIPSNAP3BQ9BS92 247 aa7.96□□□□□ -1.14
CHD3-216ENST00000573936 RPH3ALQ9UNE2 315 aa7.96□□□□□ -1.14
CHD3-216ENST00000573936 TEX48A0A1B0GUV7 120 aa7.95□□□□□ -1.14
CHD3-216ENST00000573936 CXorf65A6NEN9 183 aa7.95□□□□□ -1.14
CHD3-216ENST00000573936 TEX46H3BTG2 121 aa7.95□□□□□ -1.14
CHD3-216ENST00000573936 H7BYZ3 331 aa7.95□□□□□ -1.14
CHD3-216ENST00000573936 DEFB4AO15263 64 aa7.95□□□□□ -1.14
CHD3-216ENST00000573936 PPT1P50897 306 aa7.95□□□□□ -1.14
CHD3-216ENST00000573936 TAS2R60P59551 318 aa7.95□□□□□ -1.14
CHD3-216ENST00000573936 CLLU1Q5K131 121 aa7.95□□□□□ -1.14
CHD3-216ENST00000573936 GFI1BQ5VTD9 330 aa7.95□□□□□ -1.14
CHD3-216ENST00000573936 GOLT1AQ6ZVE7 132 aa7.95□□□□□ -1.14
CHD3-216ENST00000573936 C11orf45Q8TAV5 145 aa7.95□□□□□ -1.14
CHD3-216ENST00000573936 ARL2-SNX15V9GYD0 113 aa7.95□□□□□ -1.14
CHD3-216ENST00000573936 LOC102723971A0A1B0GUV8 181 aa7.94□□□□□ -1.14
CHD3-216ENST00000573936 C7orf71A4D174 169 aa7.94□□□□□ -1.14
CHD3-216ENST00000573936 FBLL1A6NHQ2 334 aaKnown RBP7.94□□□□□ -1.14
CHD3-216ENST00000573936 KLLNB2CW77 178 aa7.94□□□□□ -1.14
CHD3-216ENST00000573936 J3KRW8 73 aa7.94□□□□□ -1.14
CHD3-216ENST00000573936 GPX1P07203 203 aa7.94□□□□□ -1.14
CHD3-216ENST00000573936 UBE2G2P60604 165 aa7.94□□□□□ -1.14
CHD3-216ENST00000573936 RAB14P61106 215 aa7.94□□□□□ -1.14
CHD3-216ENST00000573936 CCDC28AQ8IWP9 274 aa7.94□□□□□ -1.14
CHD3-216ENST00000573936 EPDR1Q9UM22 224 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms