RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 SSX7Q7RTT5 188 aa9.84□□□□□ -0.83
RPAIN-213ENST00000573577 FAM213BQ8TBF2 198 aa9.84□□□□□ -0.83
RPAIN-213ENST00000573577 IGF2BP2-AS1Q96M15 143 aa9.84□□□□□ -0.83
RPAIN-213ENST00000573577 GOLT1BQ9Y3E0 138 aa9.84□□□□□ -0.83
RPAIN-213ENST00000573577 CSMD3Q7Z407 3707 aa9.83□□□□□ -0.84
RPAIN-213ENST00000573577 A0A1W2PRE2 83 aa9.83□□□□□ -0.84
RPAIN-213ENST00000573577 RBAKDNA6NC62 111 aa9.83□□□□□ -0.84
RPAIN-213ENST00000573577 ZNF705EA8MWA4 302 aaPredicted RBP9.83□□□□□ -0.84
RPAIN-213ENST00000573577 M0R2Z0 102 aa9.83□□□□□ -0.84
RPAIN-213ENST00000573577 SLC25A5P05141 298 aaKnown RBP9.83□□□□□ -0.84
RPAIN-213ENST00000573577 PRB4P10163 310 aaPredicted RBP9.83□□□□□ -0.84
RPAIN-213ENST00000573577 MIFP14174 115 aa9.83□□□□□ -0.84
RPAIN-213ENST00000573577 LEPP41159 167 aa9.83□□□□□ -0.84
RPAIN-213ENST00000573577 FHITP49789 147 aa9.83□□□□□ -0.84
RPAIN-213ENST00000573577 C9orf47Q6ZRZ4 202 aa9.83□□□□□ -0.84
RPAIN-213ENST00000573577 NKX6-2Q9C056 277 aaPredicted RBP9.83□□□□□ -0.84
RPAIN-213ENST00000573577 IGKV2-40A0A087WW87 121 aaPredicted RBP9.82□□□□□ -0.84
RPAIN-213ENST00000573577 DIRC3C9JPN6 131 aa9.82□□□□□ -0.84
RPAIN-213ENST00000573577 IGKV2D-40P01614 121 aaPredicted RBP9.82□□□□□ -0.84
RPAIN-213ENST00000573577 FGF8P55075 233 aaPredicted RBP9.82□□□□□ -0.84
RPAIN-213ENST00000573577 C5orf17Q8NAS9 161 aa9.82□□□□□ -0.84
RPAIN-213ENST00000573577 SFT2D1Q8WV19 159 aa9.82□□□□□ -0.84
RPAIN-213ENST00000573577 TMEM208Q9BTX3 173 aa9.82□□□□□ -0.84
RPAIN-213ENST00000573577 RYR3Q15413 4870 aa9.82□□□□□ -0.84
RPAIN-213ENST00000573577 IGHV3OR16-12A0A075B7B8 117 aa9.81□□□□□ -0.84
RPAIN-213ENST00000573577 SERTM2A0A1B0GWG4 89 aa9.81□□□□□ -0.84
RPAIN-213ENST00000573577 SMIM9A6NGZ8 99 aa9.81□□□□□ -0.84
RPAIN-213ENST00000573577 TEX46H3BTG2 121 aa9.81□□□□□ -0.84
RPAIN-213ENST00000573577 K7EQM0 130 aa9.81□□□□□ -0.84
RPAIN-213ENST00000573577 H2AFB1P0C5Y9 115 aa9.81□□□□□ -0.84
RPAIN-213ENST00000573577 CT45A10P0DMU9 189 aa9.81□□□□□ -0.84
RPAIN-213ENST00000573577 ERCC8Q13216 396 aa9.81□□□□□ -0.84
RPAIN-213ENST00000573577 ZNF705AQ6ZN79 300 aaPredicted RBP9.81□□□□□ -0.84
RPAIN-213ENST00000573577 TMEM256Q8N2U0 113 aa9.81□□□□□ -0.84
RPAIN-213ENST00000573577 MBD3L1Q8WWY6 194 aa9.81□□□□□ -0.84
RPAIN-213ENST00000573577 NEU1Q99519 415 aa9.81□□□□□ -0.84
RPAIN-213ENST00000573577 C20orf144Q9BQM9 153 aa9.81□□□□□ -0.84
RPAIN-213ENST00000573577 AGPAT4-IT1Q9H0P7 198 aa9.81□□□□□ -0.84
RPAIN-213ENST00000573577 C11orf68Q9H3H3 251 aaKnown RBP9.81□□□□□ -0.84
RPAIN-213ENST00000573577 TRAV12-2A0A075B6T6 113 aa9.8□□□□□ -0.84
RPAIN-213ENST00000573577 TRBV7-9A0A0J9YWB2 115 aa9.8□□□□□ -0.84
RPAIN-213ENST00000573577 CRXO43186 299 aaPredicted RBP9.8□□□□□ -0.84
RPAIN-213ENST00000573577 SULT1A2P50226 295 aa9.8□□□□□ -0.84
RPAIN-213ENST00000573577 PPT1P50897 306 aa9.8□□□□□ -0.84
RPAIN-213ENST00000573577 ZNF138P52744 262 aa9.8□□□□□ -0.84
RPAIN-213ENST00000573577 NKX2-5P52952 324 aaPredicted RBP9.8□□□□□ -0.84
RPAIN-213ENST00000573577 SUMO1P63165 101 aaKnown RBP9.8□□□□□ -0.84
RPAIN-213ENST00000573577 VGLL1Q99990 258 aa9.8□□□□□ -0.84
RPAIN-213ENST00000573577 TMPRSS5Q9H3S3 457 aa9.8□□□□□ -0.84
RPAIN-213ENST00000573577 ZNF492Q9P255 531 aa9.8□□□□□ -0.84
RPAIN-213ENST00000573577 RPH3ALQ9UNE2 315 aa9.8□□□□□ -0.84
RPAIN-213ENST00000573577 ARL2-SNX15V9GYD0 113 aa9.8□□□□□ -0.84
RPAIN-213ENST00000573577 X6R8D5 127 aa9.8□□□□□ -0.84
RPAIN-213ENST00000573577 DYNC2H1Q8NCM8 4307 aaKnown RBP9.79□□□□□ -0.84
RPAIN-213ENST00000573577 HBE1P02100 147 aa9.79□□□□□ -0.84
RPAIN-213ENST00000573577 NMBP08949 121 aa9.79□□□□□ -0.84
RPAIN-213ENST00000573577 UBE2G2P60604 165 aa9.79□□□□□ -0.84
RPAIN-213ENST00000573577 GOLT1AQ6ZVE7 132 aa9.79□□□□□ -0.84
RPAIN-213ENST00000573577 C1orf158Q8N1D5 194 aa9.79□□□□□ -0.84
RPAIN-213ENST00000573577 Q8NAQ8 132 aa9.79□□□□□ -0.84
RPAIN-213ENST00000573577 LENEPQ9Y5L5 61 aa9.79□□□□□ -0.84
RPAIN-213ENST00000573577 IGHV4-28A0A0C4DH34 117 aa9.78□□□□□ -0.84
RPAIN-213ENST00000573577 TMEM189A5PLL7 270 aa9.78□□□□□ -0.84
RPAIN-213ENST00000573577 FAM74A7A6NL05 159 aa9.78□□□□□ -0.84
RPAIN-213ENST00000573577 GGTLC3B5MD39 225 aa9.78□□□□□ -0.84
RPAIN-213ENST00000573577 IFNA7P01567 189 aa9.78□□□□□ -0.84
RPAIN-213ENST00000573577 TCRAP04437 139 aa9.78□□□□□ -0.84
RPAIN-213ENST00000573577 RRN3P1Q2M238 152 aa9.78□□□□□ -0.84
RPAIN-213ENST00000573577 LINC01587Q99440 93 aa9.78□□□□□ -0.84
RPAIN-213ENST00000573577 TCEAL7Q9BRU2 100 aa9.78□□□□□ -0.84
RPAIN-213ENST00000573577 NIPSNAP3BQ9BS92 247 aa9.78□□□□□ -0.84
RPAIN-213ENST00000573577 EPDR1Q9UM22 224 aa9.78□□□□□ -0.84
RPAIN-213ENST00000573577 TRAV1-1A0A0B4J248 108 aa9.77□□□□□ -0.85
RPAIN-213ENST00000573577 CXorf65A6NEN9 183 aa9.77□□□□□ -0.85
RPAIN-213ENST00000573577 FBLL1A6NHQ2 334 aaKnown RBP9.77□□□□□ -0.85
RPAIN-213ENST00000573577 KLLNB2CW77 178 aa9.77□□□□□ -0.85
RPAIN-213ENST00000573577 H7BYZ3 331 aa9.77□□□□□ -0.85
RPAIN-213ENST00000573577 J3KRW8 73 aa9.77□□□□□ -0.85
RPAIN-213ENST00000573577 GPX1P07203 203 aa9.77□□□□□ -0.85
RPAIN-213ENST00000573577 CRISP2P16562 243 aa9.77□□□□□ -0.85
RPAIN-213ENST00000573577 GNG5P63218 68 aa9.77□□□□□ -0.85
RPAIN-213ENST00000573577 PMS2P11Q13670 270 aa9.77□□□□□ -0.85
RPAIN-213ENST00000573577 GFI1BQ5VTD9 330 aa9.77□□□□□ -0.85
RPAIN-213ENST00000573577 CST9LP1Q5W188 147 aa9.77□□□□□ -0.85
RPAIN-213ENST00000573577 CYB561D1Q8N8Q1 229 aa9.77□□□□□ -0.85
RPAIN-213ENST00000573577 HIST1H2BAQ96A08 127 aa9.77□□□□□ -0.85
RPAIN-213ENST00000573577 FAM19A4Q96LR4 140 aa9.77□□□□□ -0.85
RPAIN-213ENST00000573577 ATG101Q9BSB4 218 aa9.77□□□□□ -0.85
RPAIN-213ENST00000573577 YTHDF2Q9Y5A9 579 aaKnown RBP9.77□□□□□ -0.85
RPAIN-213ENST00000573577 RYR2Q92736 4967 aa9.76□□□□□ -0.85
RPAIN-213ENST00000573577 A0A1B0GV50 99 aa9.76□□□□□ -0.85
RPAIN-213ENST00000573577 C7orf71A4D174 169 aa9.76□□□□□ -0.85
RPAIN-213ENST00000573577 F6UZH7 168 aa9.76□□□□□ -0.85
RPAIN-213ENST00000573577 DEFB4AO15263 64 aa9.76□□□□□ -0.85
RPAIN-213ENST00000573577 TAS2R60P59551 318 aa9.76□□□□□ -0.85
RPAIN-213ENST00000573577 TNP2Q05952 138 aa9.76□□□□□ -0.85
RPAIN-213ENST00000573577 Q8TAT8 98 aa9.76□□□□□ -0.85
RPAIN-213ENST00000573577 NDFIP1Q9BT67 221 aa9.76□□□□□ -0.85
RPAIN-213ENST00000573577 TENM2Q9NT68 2774 aa9.76□□□□□ -0.85
RPAIN-213ENST00000573577 SACSQ9NZJ4 4579 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms