RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 DEFB124Q8NES8 71 aa3.63□□□□□ -1.83
CDC27-215ENST00000573550 OR10W1Q8NGF6 305 aa3.63□□□□□ -1.83
CDC27-215ENST00000573550 OR2D3Q8NGH3 330 aa3.63□□□□□ -1.83
CDC27-215ENST00000573550 ORAOV1Q8WV07 137 aa3.63□□□□□ -1.83
CDC27-215ENST00000573550 WFIKKN1Q96NZ8 548 aa3.63□□□□□ -1.83
CDC27-215ENST00000573550 NDFIP1Q9BT67 221 aa3.63□□□□□ -1.83
CDC27-215ENST00000573550 RAB1BQ9H0U4 201 aa3.63□□□□□ -1.83
CDC27-215ENST00000573550 TMEM133Q9H2Q1 129 aa3.63□□□□□ -1.83
CDC27-215ENST00000573550 LPAR2Q9HBW0 351 aa3.63□□□□□ -1.83
CDC27-215ENST00000573550 PRR34Q9NV39 138 aa3.63□□□□□ -1.83
CDC27-215ENST00000573550 ZNF835Q9Y2P0 537 aa3.63□□□□□ -1.83
CDC27-215ENST00000573550 LAMTOR2Q9Y2Q5 125 aa3.63□□□□□ -1.83
CDC27-215ENST00000573550 GOLT1BQ9Y3E0 138 aa3.63□□□□□ -1.83
CDC27-215ENST00000573550 TTC28Q96AY4 2481 aa3.63□□□□□ -1.83
CDC27-215ENST00000573550 FREM2Q5SZK8 3169 aa3.63□□□□□ -1.83
CDC27-215ENST00000573550 ANKRD11Q6UB99 2663 aaPredicted RBP3.62□□□□□ -1.83
CDC27-215ENST00000573550 TRAV30A0A087WSZ9 112 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 C2orf70A6NJV1 201 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 K7EQM0 130 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 SCGB2A1O75556 95 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 FCN3O75636 299 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 IGHV3-7P01780 117 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 SLC25A5P05141 298 aaKnown RBP3.62□□□□□ -1.83
CDC27-215ENST00000573550 IGLC1P0CG04 106 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 PYYP10082 97 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 CCL3L1P16619 93 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 TSPOP30536 169 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 S100A7P31151 101 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 TCL1AP56279 114 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 CCL8P80075 99 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 BSPH1Q075Z2 132 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 SRSF6Q13247 344 aaKnown RBP3.62□□□□□ -1.83
CDC27-215ENST00000573550 FBXL19-AS1Q494R0 122 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 FAM201AQ5SY85 155 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 FAM120AOSQ5T036 256 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 PET117Q6UWS5 81 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 PPP1R27Q86WC6 154 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 C11orf42Q8N5U0 333 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 DEFB108BQ8NET1 73 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 RNASE6Q93091 150 aaKnown RBP3.62□□□□□ -1.83
CDC27-215ENST00000573550 TXN2Q99757 166 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 TMEM70Q9BUB7 260 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 MS4A6AQ9H2W1 248 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 HIGD1AQ9Y241 93 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 SIGLEC9Q9Y336 463 aa3.62□□□□□ -1.83
CDC27-215ENST00000573550 ANKHD1Q8IWZ3 2542 aaKnown RBP3.62□□□□□ -1.83
CDC27-215ENST00000573550 URB1O60287 2271 aaKnown RBP3.61□□□□□ -1.83
CDC27-215ENST00000573550 RP1L1Q8IWN7 2480 aaPredicted RBP3.61□□□□□ -1.83
CDC27-215ENST00000573550 LOC102724200A0A096LPH7 203 aaPredicted RBP3.61□□□□□ -1.83
CDC27-215ENST00000573550 TRAV5A0A0B4J249 113 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 IGHV1-3A0A0C4DH29 117 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 SPAARA0A1B0GVQ0 90 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 OOSP1A8MZH6 123 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 E7EUB6 86 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 H3BRN7 92 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 BUB1B-PAK6H3BSN5 160 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 I3L2K1 104 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 K7EM74 188 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 M0R2Z0 102 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 ZNF25P17030 456 aaPredicted RBP3.61□□□□□ -1.83
CDC27-215ENST00000573550 FCGR2BP31994 310 aaPredicted RBP3.61□□□□□ -1.83
CDC27-215ENST00000573550 PLGLAQ15195 96 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 TDRG1Q3Y452 100 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 SAPCD1Q5SSQ6 148 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 C10orf55Q5SWW7 151 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 GDF5OSQ5U4N7 250 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 Q6ZN92 141 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 ZNF493Q6ZR52 646 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 Q6ZR54 194 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 BPIFA4PQ86YQ2 179 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 MUC15Q8N387 334 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 RPRMLQ8N4K4 120 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.61□□□□□ -1.83
CDC27-215ENST00000573550 NPBQ8NG41 125 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 H1FXQ92522 213 aaKnown RBP3.61□□□□□ -1.83
CDC27-215ENST00000573550 FAM122AQ96E09 287 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 PMCHL2Q9BQD1 86 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 SHANK2-AS3Q9BTD1 123 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 TMEM191AQ9H0A3 160 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 Q9H3A6 140 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 DYNLRB1Q9NP97 96 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 HSPB8Q9UJY1 196 aa3.61□□□□□ -1.83
CDC27-215ENST00000573550 DMDP11532 3685 aa3.6□□□□□ -1.83
CDC27-215ENST00000573550 TRBV19A0A075B6N1 114 aa3.6□□□□□ -1.83
CDC27-215ENST00000573550 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.6□□□□□ -1.83
CDC27-215ENST00000573550 IGHV1-24A0A0C4DH33 117 aa3.6□□□□□ -1.83
CDC27-215ENST00000573550 A0A1B0GUT8 65 aa3.6□□□□□ -1.83
CDC27-215ENST00000573550 PGPA6NDG6 321 aa3.6□□□□□ -1.83
CDC27-215ENST00000573550 LY6LH3BQJ8 138 aa3.6□□□□□ -1.83
CDC27-215ENST00000573550 SYS1-DBNDD2H3BUS1 97 aa3.6□□□□□ -1.83
CDC27-215ENST00000573550 M0R1W7 72 aa3.6□□□□□ -1.83
CDC27-215ENST00000573550 CHEK1O14757 476 aa3.6□□□□□ -1.83
CDC27-215ENST00000573550 NDUFA3O95167 84 aa3.6□□□□□ -1.83
CDC27-215ENST00000573550 MOSP00540 346 aa3.6□□□□□ -1.83
CDC27-215ENST00000573550 CA1P00915 261 aaPredicted RBP3.6□□□□□ -1.83
CDC27-215ENST00000573550 IGKV1-17P01599 117 aa3.6□□□□□ -1.83
CDC27-215ENST00000573550 CEACAM3P40198 252 aa3.6□□□□□ -1.83
CDC27-215ENST00000573550 NDUFV3P56181 108 aaKnown RBP3.6□□□□□ -1.83
CDC27-215ENST00000573550 SLC35B1P78383 322 aa3.6□□□□□ -1.83
CDC27-215ENST00000573550 TNXAQ16473 311 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms