RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 DMRTC2Q8IXT2 367 aaPredicted RBP9.87□□□□□ -0.83
PCDHGA9-201ENST00000573521 LYNX1G3V0Z9 82 aa9.87□□□□□ -0.83
PCDHGA9-201ENST00000573521 LYNX1P0DP58 116 aa9.87□□□□□ -0.83
PCDHGA9-201ENST00000573521 MLANAQ16655 118 aa9.87□□□□□ -0.83
PCDHGA9-201ENST00000573521 CR1LQ2VPA4 569 aa9.87□□□□□ -0.83
PCDHGA9-201ENST00000573521 RNF152Q8N8N0 203 aa9.87□□□□□ -0.83
PCDHGA9-201ENST00000573521 VGLL1Q99990 258 aa9.87□□□□□ -0.83
PCDHGA9-201ENST00000573521 IGFL2Q6UWQ7 119 aa9.87□□□□□ -0.83
PCDHGA9-201ENST00000573521 ZDBF2Q9HCK1 2354 aa9.87□□□□□ -0.83
PCDHGA9-201ENST00000573521 IGHV2-70DA0A0C4DH43 119 aa9.87□□□□□ -0.83
PCDHGA9-201ENST00000573521 TMEM213A2RRL7 107 aa9.87□□□□□ -0.83
PCDHGA9-201ENST00000573521 ZNF524Q96C55 264 aa9.87□□□□□ -0.83
PCDHGA9-201ENST00000573521 LAMA3Q16787 3333 aa9.87□□□□□ -0.83
PCDHGA9-201ENST00000573521 H3BUX3 64 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 LHBP01229 141 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 MED14OSP0DP75 135 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 SAA4P35542 130 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 C5orf24Q7Z6I8 188 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 STPG4Q8N801 248 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 ZNF491Q8N8L2 437 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 TP53TG1Q9Y2A0 90 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 IGHV1OR15-1A0A075B7D0 117 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 CD33P20138 364 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 CD24P25063 80 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 SS18Q15532 418 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 LINC01356Q8N9X3 169 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 C11orf1Q9H5F2 150 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 C9JAW5 83 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 IFITM1P13164 125 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 PRIMA1Q86XR5 153 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 JPT2Q9H910 190 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 TRAV12-3A0A0B4J271 114 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 C8orf86Q6ZUL3 223 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 PIP4P2Q8N4L2 257 aa9.86□□□□□ -0.83
PCDHGA9-201ENST00000573521 K7EN84 100 aa9.85□□□□□ -0.83
PCDHGA9-201ENST00000573521 GTSF1LQ9H1H1 148 aa9.85□□□□□ -0.83
PCDHGA9-201ENST00000573521 IGHV1-69P01742 117 aa9.85□□□□□ -0.83
PCDHGA9-201ENST00000573521 ZNF48Q96MX3 618 aaPredicted RBP9.85□□□□□ -0.83
PCDHGA9-201ENST00000573521 PRSS47A8MTI9 375 aa9.85□□□□□ -0.83
PCDHGA9-201ENST00000573521 COL8A2P25067 703 aa9.85□□□□□ -0.83
PCDHGA9-201ENST00000573521 PLA2G2CQ5R387 149 aa9.85□□□□□ -0.83
PCDHGA9-201ENST00000573521 PAX4O43316 350 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 NDUFS7O75251 213 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 FCN3O75636 299 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 FOXE3Q13461 319 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 ZC2HC1AQ96GY0 325 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 TRAV13-2A0A0B4J235 113 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 SDHAF1A6NFY7 115 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 H3BQ85 93 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 ELANEP08246 267 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 KLRD1Q13241 179 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 C11orf53Q8IXP5 236 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 ASXL3Q9C0F0 2248 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 IGHG4P01861 327 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 NPSP0C0P6 89 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 LINC00205P59089 165 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 HERVK_113P63121 156 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 SOCS3O14543 225 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 ZNF134P52741 427 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 NPBQ8NG41 125 aa9.84□□□□□ -0.83
PCDHGA9-201ENST00000573521 C6orf226Q5I0X4 101 aa9.83□□□□□ -0.84
PCDHGA9-201ENST00000573521 SMKR1H3BMG3 65 aa9.83□□□□□ -0.84
PCDHGA9-201ENST00000573521 ATP6V0E1O15342 81 aa9.83□□□□□ -0.84
PCDHGA9-201ENST00000573521 SRD5A1P18405 259 aa9.83□□□□□ -0.84
PCDHGA9-201ENST00000573521 PRSS57Q6UWY2 283 aa9.83□□□□□ -0.84
PCDHGA9-201ENST00000573521 TRAV12-1A0A0B4J245 112 aa9.83□□□□□ -0.84
PCDHGA9-201ENST00000573521 PHF3Q92576 2039 aaKnown RBP9.83□□□□□ -0.84
PCDHGA9-201ENST00000573521 K7ENP7 123 aa9.83□□□□□ -0.84
PCDHGA9-201ENST00000573521 NPYP01303 97 aa9.83□□□□□ -0.84
PCDHGA9-201ENST00000573521 IGF2BP2-AS1Q96M15 143 aa9.83□□□□□ -0.84
PCDHGA9-201ENST00000573521 MSRB2Q9Y3D2 182 aa9.83□□□□□ -0.84
PCDHGA9-201ENST00000573521 SPATA12Q7Z6I5 190 aa9.82□□□□□ -0.84
PCDHGA9-201ENST00000573521 MRPL35Q9NZE8 188 aaKnown RBP9.82□□□□□ -0.84
PCDHGA9-201ENST00000573521 FANCMQ8IYD8 2048 aa9.82□□□□□ -0.84
PCDHGA9-201ENST00000573521 GAGE12HA6NDE8 117 aa9.82□□□□□ -0.84
PCDHGA9-201ENST00000573521 MSMBP08118 114 aa9.81□□□□□ -0.84
PCDHGA9-201ENST00000573521 GP9P14770 177 aa9.81□□□□□ -0.84
PCDHGA9-201ENST00000573521 HERV-K104P63124 156 aa9.81□□□□□ -0.84
PCDHGA9-201ENST00000573521 C8orf49Q96NF6 230 aa9.81□□□□□ -0.84
PCDHGA9-201ENST00000573521 TRGV1A0A0A0MS02 117 aa9.81□□□□□ -0.84
PCDHGA9-201ENST00000573521 J3QQQ9 107 aa9.81□□□□□ -0.84
PCDHGA9-201ENST00000573521 A0A1B0GUS0 222 aa9.81□□□□□ -0.84
PCDHGA9-201ENST00000573521 ZNF503-AS2A6NEH8 195 aa9.81□□□□□ -0.84
PCDHGA9-201ENST00000573521 OVOL3O00110 214 aa9.81□□□□□ -0.84
PCDHGA9-201ENST00000573521 C12orf74Q32Q52 190 aa9.81□□□□□ -0.84
PCDHGA9-201ENST00000573521 RNF114Q9Y508 228 aa9.81□□□□□ -0.84
PCDHGA9-201ENST00000573521 SNRNP200O75643 2136 aaKnown RBP9.81□□□□□ -0.84
PCDHGA9-201ENST00000573521 CACNA1EQ15878 2313 aa9.8□□□□□ -0.84
PCDHGA9-201ENST00000573521 VWC2LB2RUY7 222 aa9.8□□□□□ -0.84
PCDHGA9-201ENST00000573521 RPL32P62910 135 aaKnown RBP9.8□□□□□ -0.84
PCDHGA9-201ENST00000573521 TRBV25-1A0A075B6N4 114 aa9.8□□□□□ -0.84
PCDHGA9-201ENST00000573521 IGHV7-4-1A0A0J9YVY3 117 aa9.8□□□□□ -0.84
PCDHGA9-201ENST00000573521 NDUFA12Q9UI09 145 aa9.8□□□□□ -0.84
PCDHGA9-201ENST00000573521 HELZP42694 1942 aaKnown RBP9.8□□□□□ -0.84
PCDHGA9-201ENST00000573521 GATD1Q8NB37 220 aa9.8□□□□□ -0.84
PCDHGA9-201ENST00000573521 TSSC4Q9Y5U2 329 aaPredicted RBP9.79□□□□□ -0.84
PCDHGA9-201ENST00000573521 WISP1O95388 367 aa9.79□□□□□ -0.84
PCDHGA9-201ENST00000573521 ETDBQ3ZM63 59 aa9.79□□□□□ -0.84
PCDHGA9-201ENST00000573521 FOXI2Q6ZQN5 318 aa9.79□□□□□ -0.84
PCDHGA9-201ENST00000573521 NAA38Q9BRA0 125 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms