RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 DUX3Q96PT4 197 aa10.83□□□□□ -0.67
TVP23A-207ENST00000573360 SLC25A39Q9BZJ4 359 aaPredicted RBP10.83□□□□□ -0.67
TVP23A-207ENST00000573360 LAMTOR2Q9Y2Q5 125 aa10.83□□□□□ -0.67
TVP23A-207ENST00000573360 HBBP68871 147 aa10.83□□□□□ -0.68
TVP23A-207ENST00000573360 TTC9CQ8N5M4 171 aa10.83□□□□□ -0.68
TVP23A-207ENST00000573360 RPP21Q9H633 154 aaKnown RBP10.83□□□□□ -0.68
TVP23A-207ENST00000573360 FAM181BA6NEQ2 426 aa10.83□□□□□ -0.68
TVP23A-207ENST00000573360 TCTAP57738 103 aa10.83□□□□□ -0.68
TVP23A-207ENST00000573360 TRGV9Q99603 122 aa10.83□□□□□ -0.68
TVP23A-207ENST00000573360 MUC21A0A0G2JKD1 596 aa10.82□□□□□ -0.68
TVP23A-207ENST00000573360 MUC21A0A140T8X8 626 aa10.82□□□□□ -0.68
TVP23A-207ENST00000573360 A6NDX4 124 aa10.82□□□□□ -0.68
TVP23A-207ENST00000573360 MUC21Q5SSG8 566 aa10.82□□□□□ -0.68
TVP23A-207ENST00000573360 MEGF9Q9H1U4 602 aa10.82□□□□□ -0.68
TVP23A-207ENST00000573360 SERTM2A0A1B0GWG4 89 aa10.82□□□□□ -0.68
TVP23A-207ENST00000573360 NPIPB5A8MRT5 1133 aa10.82□□□□□ -0.68
TVP23A-207ENST00000573360 IGLC2P0DOY2 106 aa10.82□□□□□ -0.68
TVP23A-207ENST00000573360 IGLC3P0DOY3 106 aa10.82□□□□□ -0.68
TVP23A-207ENST00000573360 BTF3P20290 206 aaKnown RBP10.82□□□□□ -0.68
TVP23A-207ENST00000573360 STPG4Q8N801 248 aa10.82□□□□□ -0.68
TVP23A-207ENST00000573360 ZNF785A8K8V0 405 aa10.82□□□□□ -0.68
TVP23A-207ENST00000573360 C21orf62-AS1Q17RA5 79 aa10.82□□□□□ -0.68
TVP23A-207ENST00000573360 LINC00322Q6ZN03 302 aaPredicted RBP10.82□□□□□ -0.68
TVP23A-207ENST00000573360 C5orf17Q8NAS9 161 aa10.82□□□□□ -0.68
TVP23A-207ENST00000573360 FAM110DQ8TAY7 271 aaPredicted RBP10.82□□□□□ -0.68
TVP23A-207ENST00000573360 M0R3E3 92 aa10.81□□□□□ -0.68
TVP23A-207ENST00000573360 CRYGCP07315 174 aa10.81□□□□□ -0.68
TVP23A-207ENST00000573360 CTSGP08311 255 aa10.81□□□□□ -0.68
TVP23A-207ENST00000573360 WFDC3Q8IUB2 231 aa10.81□□□□□ -0.68
TVP23A-207ENST00000573360 CR1P17927 2039 aa10.81□□□□□ -0.68
TVP23A-207ENST00000573360 PTTG1IPP53801 180 aa10.81□□□□□ -0.68
TVP23A-207ENST00000573360 EBLN2Q6P2I7 272 aa10.81□□□□□ -0.68
TVP23A-207ENST00000573360 ZNF491Q8N8L2 437 aa10.81□□□□□ -0.68
TVP23A-207ENST00000573360 ALKBH7Q9BT30 221 aaPredicted RBP10.81□□□□□ -0.68
TVP23A-207ENST00000573360 TP73-AS1Q9UF72 201 aa10.81□□□□□ -0.68
TVP23A-207ENST00000573360 PSMB11A5LHX3 300 aa10.81□□□□□ -0.68
TVP23A-207ENST00000573360 HSBP1L1C9JCN9 74 aa10.81□□□□□ -0.68
TVP23A-207ENST00000573360 DEFB136Q30KP8 78 aa10.81□□□□□ -0.68
TVP23A-207ENST00000573360 LRRC75A-AS1Q8N1F1 130 aa10.81□□□□□ -0.68
TVP23A-207ENST00000573360 EEF1AKMT3Q96AZ1 226 aa10.81□□□□□ -0.68
TVP23A-207ENST00000573360 LEPROTL1O95214 131 aa10.8□□□□□ -0.68
TVP23A-207ENST00000573360 TCRAP04437 139 aa10.8□□□□□ -0.68
TVP23A-207ENST00000573360 ARL3P36405 182 aa10.8□□□□□ -0.68
TVP23A-207ENST00000573360 THAP8Q8NA92 274 aa10.8□□□□□ -0.68
TVP23A-207ENST00000573360 INS-IGF2F8WCM5 200 aa10.8□□□□□ -0.68
TVP23A-207ENST00000573360 J3KRW8 73 aa10.8□□□□□ -0.68
TVP23A-207ENST00000573360 OR4C46A6NHA9 309 aa10.8□□□□□ -0.68
TVP23A-207ENST00000573360 J3QLI3 93 aa10.8□□□□□ -0.68
TVP23A-207ENST00000573360 OR4F17Q8NGA8 305 aa10.8□□□□□ -0.68
TVP23A-207ENST00000573360 C20orf202A1L168 122 aa10.79□□□□□ -0.68
TVP23A-207ENST00000573360 SCGB2A1O75556 95 aa10.79□□□□□ -0.68
TVP23A-207ENST00000573360 LINC00173Q6ZV60 143 aa10.79□□□□□ -0.68
TVP23A-207ENST00000573360 Q8N976 141 aa10.79□□□□□ -0.68
TVP23A-207ENST00000573360 TMEM70Q9BUB7 260 aa10.79□□□□□ -0.68
TVP23A-207ENST00000573360 VPREB3Q9UKI3 123 aa10.79□□□□□ -0.68
TVP23A-207ENST00000573360 OR4X2Q8NGF9 303 aa10.79□□□□□ -0.68
TVP23A-207ENST00000573360 CCDC140Q96MF4 163 aa10.79□□□□□ -0.68
TVP23A-207ENST00000573360 LOC389332A0A1B0GUA5 103 aa10.79□□□□□ -0.68
TVP23A-207ENST00000573360 hDV102S1A0JD36 115 aa10.79□□□□□ -0.68
TVP23A-207ENST00000573360 SNAI2O43623 268 aa10.79□□□□□ -0.68
TVP23A-207ENST00000573360 APOHP02749 345 aaPredicted RBP10.79□□□□□ -0.68
TVP23A-207ENST00000573360 IGLL1P15814 213 aa10.78□□□□□ -0.68
TVP23A-207ENST00000573360 HLA-DMBP28068 263 aa10.78□□□□□ -0.68
TVP23A-207ENST00000573360 BPIFA4PQ86YQ2 179 aa10.78□□□□□ -0.68
TVP23A-207ENST00000573360 MRPL27Q9P0M9 148 aaKnown RBP10.78□□□□□ -0.68
TVP23A-207ENST00000573360 RABAC1Q9UI14 185 aa10.78□□□□□ -0.68
TVP23A-207ENST00000573360 VAMP3Q15836 100 aa10.78□□□□□ -0.68
TVP23A-207ENST00000573360 FAM231DQ6ZW35 169 aa10.78□□□□□ -0.68
TVP23A-207ENST00000573360 NPFFR1Q9GZQ6 430 aa10.78□□□□□ -0.68
TVP23A-207ENST00000573360 TRAV9-2A0A087WT02 112 aa10.78□□□□□ -0.68
TVP23A-207ENST00000573360 TSPOP30536 169 aa10.78□□□□□ -0.68
TVP23A-207ENST00000573360 PRSS22Q9GZN4 317 aa10.78□□□□□ -0.68
TVP23A-207ENST00000573360 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.77□□□□□ -0.68
TVP23A-207ENST00000573360 F8W735 103 aaPredicted RBP10.77□□□□□ -0.68
TVP23A-207ENST00000573360 RBPMS2Q6ZRY4 209 aaKnown RBP10.77□□□□□ -0.68
TVP23A-207ENST00000573360 PRSS3P2Q8NHM4 247 aa10.77□□□□□ -0.68
TVP23A-207ENST00000573360 GTSF1Q8WW33 167 aa10.77□□□□□ -0.68
TVP23A-207ENST00000573360 UNQ9165/PRO28630Q6UXU0 137 aa10.77□□□□□ -0.69
TVP23A-207ENST00000573360 MBD6Q96DN6 1003 aa10.77□□□□□ -0.69
TVP23A-207ENST00000573360 FMC1Q96HJ9 113 aa10.77□□□□□ -0.69
TVP23A-207ENST00000573360 IGHG2P01859 326 aa10.77□□□□□ -0.69
TVP23A-207ENST00000573360 RAB9AP51151 201 aa10.77□□□□□ -0.69
TVP23A-207ENST00000573360 SRSF8Q9BRL6 282 aaKnown RBP10.77□□□□□ -0.69
TVP23A-207ENST00000573360 TRAV30A0A087WSZ9 112 aa10.76□□□□□ -0.69
TVP23A-207ENST00000573360 K7EQM0 130 aa10.76□□□□□ -0.69
TVP23A-207ENST00000573360 CT45A10P0DMU9 189 aa10.76□□□□□ -0.69
TVP23A-207ENST00000573360 ZNF502Q8TBZ5 544 aa10.76□□□□□ -0.69
TVP23A-207ENST00000573360 TOMM40O96008 361 aa10.76□□□□□ -0.69
TVP23A-207ENST00000573360 LINC00614P0C842 121 aa10.76□□□□□ -0.69
TVP23A-207ENST00000573360 EDN2P20800 178 aa10.76□□□□□ -0.69
TVP23A-207ENST00000573360 PVRIGQ6DKI7 326 aa10.76□□□□□ -0.69
TVP23A-207ENST00000573360 PRSS57Q6UWY2 283 aa10.76□□□□□ -0.69
TVP23A-207ENST00000573360 RNF182Q8N6D2 247 aa10.76□□□□□ -0.69
TVP23A-207ENST00000573360 CBY3A6NI87 242 aa10.75□□□□□ -0.69
TVP23A-207ENST00000573360 CTRLP40313 264 aa10.75□□□□□ -0.69
TVP23A-207ENST00000573360 DEFB1P60022 68 aa10.75□□□□□ -0.69
TVP23A-207ENST00000573360 TM4SF20Q53R12 229 aa10.75□□□□□ -0.69
TVP23A-207ENST00000573360 FA2HQ7L5A8 372 aa10.75□□□□□ -0.69
TVP23A-207ENST00000573360 ZFP30Q9Y2G7 519 aa10.75□□□□□ -0.69
TVP23A-207ENST00000573360 FXYD7P58549 80 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms